Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is treA [H]
Identifier: 238025136
GI number: 238025136
Start: 2249636
End: 2251261
Strand: Reverse
Name: treA [H]
Synonym: bglu_2g18010
Alternate gene names: 238025136
Gene position: 2251261-2249636 (Counterclockwise)
Preceding gene: 238025139
Following gene: 238025133
Centisome position: 79.62
GC content: 70.3
Gene sequence:
>1626_bases ATGCTCGTGCTCGCGGCCGCGTTCGTGTCGTTGCCCGCCTGCTCCGACATGAACACGGCGCAGTCGGCCACGCCGGCGGC CGCGCGTGCCGCCGGTACCGACGCCGCGGCGGCCGCCGCGCAGCCTGCCGGCCTGCTGCCGCCGCCGAGCCAGCTCTATG GCGACCTGTTCGTGGCCGTGCAGACCGCGCAGCTGTTTCCGGATCAGAAGACCTTCGTCGATTCGACGCCCGACGCCGAT CCGTCCACGATCGTGCAGTTCTACGCGCAGCAGAAGGATGCGCCGGGCTTTTCGCTGCGCGAGTTCGTCGCCAAGCACTT CACGCCGCCGGTGGACAGCGTGGTCACGCCGCCCGCGAACCAGACGCTGCGCGCCCACATCGACTGGCTGTGGCCGCGCC TGACGCGCAACACCGACGGCGCGCCGCGCTACGGCTCGCTGATCGCGCTGCCCAAGCCATACGTGGTGCCGGGCGGCCGC TTCCGCGAAGGCTACTACTGGGACAGCTACTTCACGATGCTCGGCCTGCAGGACGCCGGGCGCGAGGATCTGGTCGACGC GATGCTCGACAACTTCGCCTACCTGATCGATACGGTCGGCCACGTGCCGAACGGCAATCGCACCTACTACGCGAGCCGCT CGCAGCCGCCGTTCTTCGCCTACATGGTCGAGCTGGCCGCGAAGAAGGAGGGCAACGGCGTCTACCAGAAGTATCTGCCG GCGCTGCGCAAGGAATATGCTTACTGGATGCAGGGTGAAGCGAGCACGCCGCGCGGCAGCGCGTCGGCGCACGTGGTGGC GATGCCCGACGGCGCGATCCTGAACCGCTACTGGGATGCGAGCGCGACGCCGCGCGACGAATCCTACCTCGAGGACGTGC AGACTGCGCGCGCGGCCACGGGCCGGCCCGCGGCCGAGGTGTGGCGCGACCTGCGCGCCGGTGCCGAGAGCGGCTGGGAC TACAGCTCGCGCTGGCTCGGCGACGGCCGCACGCTCGCCACCATCCGCACCACCGCGATCGTGCCGGTCGACCTGAACAG CCTGATGTACCACCTGGAGAAGACCATCGTGAAGGGCTGCGGCGTCACGCACGATGTCGCCTGCGTGGCCGATTTTTCCG CGCGCGCCGCGCGCCGCGACGCCGCGATCAACCGCTATCTGTGGAATCCGGCCGGCTATTACGGCGACTATGACTGGCAG CTCGGCAAGCCGCGTGACGGACTCAGCGCGGCCGCGCTCTACCCGCTCTACGCCGGCGCGGCCACCCCCGAGCACGCGAT CTCCACCGCCCAGCACGTGCGCGACACGCTGCTGCAGCCGGGCGGCCTCGCCACCACCACCCGCAACACCGGCCAGCAGT GGGATGCGCCGAACGGCTGGGCTCCGCTGCAATGGATCGCGATCCAGGGGCTCACGCGCTACGGCGAACGCCCGCTCGCC GACGAGATCGGCAAGCGTTTCCTGGCCGACGTGAAGGGCGTGTACGCGCGCGAGGGCAAGCTCGTCGAGAAGTACGTGGT GGAGGGGGCCGGCGTGGGCGGCGGCGGCGGGGAGTACCCGCTGCAGGACGGCTTCGGCTGGACCAACGGCGTGACCGCGA AGCTGCTCGACCGCTACGGACAGTAA
Upstream 100 bases:
>100_bases GGCCCAAGCCCGCCGCGCGTTGCGCGTCAGCTCTACGAAAACCGTGGCCGTGGCGGCACGGCGCCGTGCACGGCACGCCC TCGGCCATCGCGCGGGCTCC
Downstream 100 bases:
>100_bases TGAAACCGGCCCGCCGCCGGATTCCGGCGACGGGCCGCTCGCGCGCAGCGGCGCTCAGAGGAACGCGTGCGATACCTGCG CGCCCGGTTGCGGCATGCGG
Product: Neutral trehalase
Products: NA
Alternate protein names: Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MLVLAAAFVSLPACSDMNTAQSATPAAARAAGTDAAAAAAQPAGLLPPPSQLYGDLFVAVQTAQLFPDQKTFVDSTPDAD PSTIVQFYAQQKDAPGFSLREFVAKHFTPPVDSVVTPPANQTLRAHIDWLWPRLTRNTDGAPRYGSLIALPKPYVVPGGR FREGYYWDSYFTMLGLQDAGREDLVDAMLDNFAYLIDTVGHVPNGNRTYYASRSQPPFFAYMVELAAKKEGNGVYQKYLP ALRKEYAYWMQGEASTPRGSASAHVVAMPDGAILNRYWDASATPRDESYLEDVQTARAATGRPAAEVWRDLRAGAESGWD YSSRWLGDGRTLATIRTTAIVPVDLNSLMYHLEKTIVKGCGVTHDVACVADFSARAARRDAAINRYLWNPAGYYGDYDWQ LGKPRDGLSAAALYPLYAGAATPEHAISTAQHVRDTLLQPGGLATTTRNTGQQWDAPNGWAPLQWIAIQGLTRYGERPLA DEIGKRFLADVKGVYAREGKLVEKYVVEGAGVGGGGGEYPLQDGFGWTNGVTAKLLDRYGQ
Sequences:
>Translated_541_residues MLVLAAAFVSLPACSDMNTAQSATPAAARAAGTDAAAAAAQPAGLLPPPSQLYGDLFVAVQTAQLFPDQKTFVDSTPDAD PSTIVQFYAQQKDAPGFSLREFVAKHFTPPVDSVVTPPANQTLRAHIDWLWPRLTRNTDGAPRYGSLIALPKPYVVPGGR FREGYYWDSYFTMLGLQDAGREDLVDAMLDNFAYLIDTVGHVPNGNRTYYASRSQPPFFAYMVELAAKKEGNGVYQKYLP ALRKEYAYWMQGEASTPRGSASAHVVAMPDGAILNRYWDASATPRDESYLEDVQTARAATGRPAAEVWRDLRAGAESGWD YSSRWLGDGRTLATIRTTAIVPVDLNSLMYHLEKTIVKGCGVTHDVACVADFSARAARRDAAINRYLWNPAGYYGDYDWQ LGKPRDGLSAAALYPLYAGAATPEHAISTAQHVRDTLLQPGGLATTTRNTGQQWDAPNGWAPLQWIAIQGLTRYGERPLA DEIGKRFLADVKGVYAREGKLVEKYVVEGAGVGGGGGEYPLQDGFGWTNGVTAKLLDRYGQ >Mature_541_residues MLVLAAAFVSLPACSDMNTAQSATPAAARAAGTDAAAAAAQPAGLLPPPSQLYGDLFVAVQTAQLFPDQKTFVDSTPDAD PSTIVQFYAQQKDAPGFSLREFVAKHFTPPVDSVVTPPANQTLRAHIDWLWPRLTRNTDGAPRYGSLIALPKPYVVPGGR FREGYYWDSYFTMLGLQDAGREDLVDAMLDNFAYLIDTVGHVPNGNRTYYASRSQPPFFAYMVELAAKKEGNGVYQKYLP ALRKEYAYWMQGEASTPRGSASAHVVAMPDGAILNRYWDASATPRDESYLEDVQTARAATGRPAAEVWRDLRAGAESGWD YSSRWLGDGRTLATIRTTAIVPVDLNSLMYHLEKTIVKGCGVTHDVACVADFSARAARRDAAINRYLWNPAGYYGDYDWQ LGKPRDGLSAAALYPLYAGAATPEHAISTAQHVRDTLLQPGGLATTTRNTGQQWDAPNGWAPLQWIAIQGLTRYGERPLA DEIGKRFLADVKGVYAREGKLVEKYVVEGAGVGGGGGEYPLQDGFGWTNGVTAKLLDRYGQ
Specific function: Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system [H]
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 37 family [H]
Homologues:
Organism=Homo sapiens, GI116284412, Length=536, Percent_Identity=35.0746268656716, Blast_Score=272, Evalue=5e-73, Organism=Escherichia coli, GI1787447, Length=492, Percent_Identity=55.0813008130081, Blast_Score=544, Evalue=1e-156, Organism=Escherichia coli, GI1789936, Length=508, Percent_Identity=51.9685039370079, Blast_Score=502, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17542196, Length=534, Percent_Identity=32.9588014981273, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI25148109, Length=574, Percent_Identity=29.9651567944251, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI25141398, Length=539, Percent_Identity=31.1688311688312, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17565078, Length=519, Percent_Identity=32.7552986512524, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI71987755, Length=441, Percent_Identity=29.2517006802721, Blast_Score=185, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6320204, Length=440, Percent_Identity=30.2272727272727, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6319473, Length=428, Percent_Identity=31.7757009345794, Blast_Score=147, Evalue=4e-36, Organism=Drosophila melanogaster, GI24656680, Length=538, Percent_Identity=32.1561338289963, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24656675, Length=538, Percent_Identity=32.1561338289963, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24656661, Length=538, Percent_Identity=32.1561338289963, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI17933716, Length=538, Percent_Identity=32.1561338289963, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24656670, Length=538, Percent_Identity=32.1561338289963, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24656685, Length=496, Percent_Identity=32.4596774193548, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI22024178, Length=532, Percent_Identity=29.5112781954887, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI45551104, Length=372, Percent_Identity=31.1827956989247, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28573474, Length=297, Percent_Identity=28.6195286195286, Blast_Score=116, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 - InterPro: IPR018232 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: =3.2.1.28 [H]
Molecular weight: Translated: 58841; Mature: 58841
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00927 TREHALASE_1 ; PS00928 TREHALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLAAAFVSLPACSDMNTAQSATPAAARAAGTDAAAAAAQPAGLLPPPSQLYGDLFVAV CEEEEEHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH QTAQLFPDQKTFVDSTPDADPSTIVQFYAQQKDAPGFSLREFVAKHFTPPVDSVVTPPAN HHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCCCCC QTLRAHIDWLWPRLTRNTDGAPRYGSLIALPKPYVVPGGRFREGYYWDSYFTMLGLQDAG CHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCCCCCCCEEEHHHHHHHCCCCCC REDLVDAMLDNFAYLIDTVGHVPNGNRTYYASRSQPPFFAYMVELAAKKEGNGVYQKYLP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH ALRKEYAYWMQGEASTPRGSASAHVVAMPDGAILNRYWDASATPRDESYLEDVQTARAAT HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCC GRPAAEVWRDLRAGAESGWDYSSRWLGDGRTLATIRTTAIVPVDLNSLMYHLEKTIVKGC CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHC GVTHDVACVADFSARAARRDAAINRYLWNPAGYYGDYDWQLGKPRDGLSAAALYPLYAGA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC ATPEHAISTAQHVRDTLLQPGGLATTTRNTGQQWDAPNGWAPLQWIAIQGLTRYGERPLA CCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH DEIGKRFLADVKGVYAREGKLVEKYVVEGAGVGGGGGEYPLQDGFGWTNGVTAKLLDRYG HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC Q C >Mature Secondary Structure MLVLAAAFVSLPACSDMNTAQSATPAAARAAGTDAAAAAAQPAGLLPPPSQLYGDLFVAV CEEEEEHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHH QTAQLFPDQKTFVDSTPDADPSTIVQFYAQQKDAPGFSLREFVAKHFTPPVDSVVTPPAN HHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCCCCC QTLRAHIDWLWPRLTRNTDGAPRYGSLIALPKPYVVPGGRFREGYYWDSYFTMLGLQDAG CHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEECCCCCCCCCEEEHHHHHHHCCCCCC REDLVDAMLDNFAYLIDTVGHVPNGNRTYYASRSQPPFFAYMVELAAKKEGNGVYQKYLP HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH ALRKEYAYWMQGEASTPRGSASAHVVAMPDGAILNRYWDASATPRDESYLEDVQTARAAT HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCC GRPAAEVWRDLRAGAESGWDYSSRWLGDGRTLATIRTTAIVPVDLNSLMYHLEKTIVKGC CCCHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHC GVTHDVACVADFSARAARRDAAINRYLWNPAGYYGDYDWQLGKPRDGLSAAALYPLYAGA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC ATPEHAISTAQHVRDTLLQPGGLATTTRNTGQQWDAPNGWAPLQWIAIQGLTRYGERPLA CCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH DEIGKRFLADVKGVYAREGKLVEKYVVEGAGVGGGGGEYPLQDGFGWTNGVTAKLLDRYG HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]