| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yheO [C]
Identifier: 238025065
GI number: 238025065
Start: 2160316
End: 2160948
Strand: Direct
Name: yheO [C]
Synonym: bglu_2g17210
Alternate gene names: 238025065
Gene position: 2160316-2160948 (Clockwise)
Preceding gene: 238025059
Following gene: 238025066
Centisome position: 76.41
GC content: 66.98
Gene sequence:
>633_bases ATGCCCCGAAAGACTTCCGTGTCGGAACAGGCCTCGCTGATCGAGCAGGTCCGCACCATCGCGCAAGGGCTCGGCGAGAT GTTCGCGCCGTTCACCGAGGTGGTGGTACACGACCTGCGCACTCCCGAGAACTCGATCATCGCGATCCACAATAACCTGT CGGGCCGCGCGGTGGGCGATCCGACCACCGAACTCGGCCTCGCGCGCATCGCCGACAGCGATTACCCCCCGCTGCTGACG AACTACGCGAACCGCTTCGCGGACGGGCGGCCCGCGAAAAGCGCCTCGATCGGCATCAAGGACGCCAATGGCGACTATGT CGCCGCGCTGTGCCTGAACGTCGACGTCACGCTGTTCCGCGGCATCCAGGGCCTGCTGAACCAGTTCTGCCAGACCGGGC CGGACCAGCTCGGCGAGACGCTCGACCCGGCCAACGCCGACGCGATCCGCGAGCGGATCGACCGCTTCGCGATGACGCTC GCGACCACGCCGCGCTCGCTGAAGACCGAGCAGCGCCGCGAGCTGATGCAGGCGCTGCGCGCCGAGGGCTATCTGGAAGT GCGTCGCGCCATGGAAGTGATCGCGCAACATCTCGGCGTGTCGCGCGCCACCGTCTACAACGACGCCAAATAA
Upstream 100 bases:
>100_bases CCGACTCGCCCGCCGCCCCGCTGCGCCTGGCGCGCGCGGCGCGCGAGGCAATCCCGGGCGGTGGTTACAATACCGTCAAA TTCCGGATAAAACGTCCAAT
Downstream 100 bases:
>100_bases GGCGCCGGCCGGACGCACCTTGCCGGCACCCGCGCCGGGTTTGTAGGAAATGGCCTACAAATTTCAGCGAAACACCTACC CCAATTTCATTCGACGCCGA
Product: YheO domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MPRKTSVSEQASLIEQVRTIAQGLGEMFAPFTEVVVHDLRTPENSIIAIHNNLSGRAVGDPTTELGLARIADSDYPPLLT NYANRFADGRPAKSASIGIKDANGDYVAALCLNVDVTLFRGIQGLLNQFCQTGPDQLGETLDPANADAIRERIDRFAMTL ATTPRSLKTEQRRELMQALRAEGYLEVRRAMEVIAQHLGVSRATVYNDAK
Sequences:
>Translated_210_residues MPRKTSVSEQASLIEQVRTIAQGLGEMFAPFTEVVVHDLRTPENSIIAIHNNLSGRAVGDPTTELGLARIADSDYPPLLT NYANRFADGRPAKSASIGIKDANGDYVAALCLNVDVTLFRGIQGLLNQFCQTGPDQLGETLDPANADAIRERIDRFAMTL ATTPRSLKTEQRRELMQALRAEGYLEVRRAMEVIAQHLGVSRATVYNDAK >Mature_209_residues PRKTSVSEQASLIEQVRTIAQGLGEMFAPFTEVVVHDLRTPENSIIAIHNNLSGRAVGDPTTELGLARIADSDYPPLLTN YANRFADGRPAKSASIGIKDANGDYVAALCLNVDVTLFRGIQGLLNQFCQTGPDQLGETLDPANADAIRERIDRFAMTLA TTPRSLKTEQRRELMQALRAEGYLEVRRAMEVIAQHLGVSRATVYNDAK
Specific function: Unknown
COG id: COG2964
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yheO [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013559 - ProDom: PD037769 [H]
Pfam domain/function: PF08348 PAS_6 [H]
EC number: NA
Molecular weight: Translated: 22997; Mature: 22866
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKTSVSEQASLIEQVRTIAQGLGEMFAPFTEVVVHDLRTPENSIIAIHNNLSGRAVGD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC PTTELGLARIADSDYPPLLTNYANRFADGRPAKSASIGIKDANGDYVAALCLNVDVTLFR CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHH GIQGLLNQFCQTGPDQLGETLDPANADAIRERIDRFAMTLATTPRSLKTEQRRELMQALR HHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AEGYLEVRRAMEVIAQHLGVSRATVYNDAK HCCHHHHHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure PRKTSVSEQASLIEQVRTIAQGLGEMFAPFTEVVVHDLRTPENSIIAIHNNLSGRAVGD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC PTTELGLARIADSDYPPLLTNYANRFADGRPAKSASIGIKDANGDYVAALCLNVDVTLFR CHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHH GIQGLLNQFCQTGPDQLGETLDPANADAIRERIDRFAMTLATTPRSLKTEQRRELMQALR HHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AEGYLEVRRAMEVIAQHLGVSRATVYNDAK HCCHHHHHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]