Click here to switch to the map view.

The map label for this gene is narL [C]

Identifier: 238025036

GI number: 238025036

Start: 2121136

End: 2122725

Strand: Reverse

Name: narL [C]

Synonym: bglu_2g16930

Alternate gene names: 238025036

Gene position: 2122725-2121136 (Counterclockwise)

Preceding gene: 238025037

Following gene: 238025035

Centisome position: 75.08

GC content: 70.82

Gene sequence:

>1590_bases
ATGACCCAACCCGCCAACGAACATCAACCCGCGCCGGCCGACGAGCAGGCGCTGAAGACCCACACCGACCGGCGCCAGCT
GCATCAGATCATCGCCGGGCTGACCGAGGGCGTGATCCTGGTCGAGCCCGACCAGCGCATCGTCTGGGCCAACGAGGCCG
CGCTCGCGATGCACGGGGTGGCCACGCTCGCCGAGCTCGGCGCCGACGTGACCGAATACCGCGAGCGCTTCCGGCTGCGC
GACACCAACCACGACCCGGTGCGGCAGGGCCAGTATCCGATCGACCGGGTGATCAGCGGCGAGCAGTTCAGCGACGTGAC
GGTGGAGGTGGAGGCGGCCGCCGACGAATCGCAGCGCTGGGTGCACCGGATTCGCAGCCTGGTGCTGACCAACGCGGCCG
GCGAGCCCGACTGTCTCGCGCTGGTGCTGCACGACGCCACCGAGTGGGCCAGCGCCGAGCAGCGCTTCGAGCGCACCTTC
AACGCCAACCCCTCGCCGGCCGCGATCTGCCGGCTCAGTGATTTCCGCTACGTGAAGGTGAACCAGGGCTTCCTCGACAT
GACGCGCCATGCGCTCGACGACGTGATCGGCCGCTCGGTCTACGAGCTCGACGTGTTCGATCGCGCCGAGCATCGCGAGC
TGGCCGTCGAGCGGCTCGGCGAGGGCATGACGATCCCGCCGATGGAGGCGCTGCTGCGCACCGCCGACGGCGGCGACCAC
GCCGTGATCGTGTCCGGCCAGCCGATCGACCTGGGCGACGACGCCTGCATGCTGTTCACGTTCACCGACCTGGAGCCGCG
CAAGCAGGCCGAGATGGCGCTGCGCCAGAGCGAGGAGCGCTTCGCCAAGGCGTTCCGGATGGCGCCCGTGGCGATGGCGA
TGCTGACCGCCGAGCGCTTCGAGATCCTCGACCTGAACGACGCGTTCGTCGCGATGACGGGCCACGAGCAGGGCGAACTG
CTCGGCCGCGCGGCCGACGAGATCGGCCTGTGGGCCGACCCCGGCGCGCTGCGCGAGATCGCGGCGGCGCTGGAGGGCGA
GGCCGTGGTGCGCATGCGCGACGTGCAGGTGACGACGCGCGACGGCGACCTGCGCGACTGCGTGGTGTCGGCCGACGCGG
TGGCGATCCACGGCCAGGACTGCATTCTGATGGCGCTGCTCGACATCAGCGAGCGCAAGCGCACCGAGATGGAACTGATC
CAGGCGATCGAGACGGCCATGCAGGACGCCTCGTGGTTCAGCCGCACGCTGATCGAGAAGCTCGCCAACGTGCGCCGCGC
CAAGGCGCCCGATGCCGGCGCGCAGCTCGCCGACCTGACCGCGCGCGAGCGCGACGTGTTCGACCTGCTCTGCCACGGGC
TGCCCGACAAGGAAATCGCGAACCGGCTCGGCCTCGCGCCGAACACGGTGCGCAACCACGTCGCCACGATCTACACCAAG
CTCGACGTGCACAGCCGCGGCGAGGCGATCGTCTGGGCGCGCGAGCGCGGCATCGTCGGCGCCGATCCGGGGGCGGCAAA
CCCCGCCGAGGCGGCGCCGAAAGCGGCATCGAAGTCCGGCCGCACGCCGCGCAGACCGGCGCGAAAATGA

Upstream 100 bases:

>100_bases
CGTGCTCGCCCTGGGGGGTCTCCACGTCCGGTACCCCACCATGTCGCGCATCCCCCTCGTTTCCGGCCTGGCCCGGCGTC
CCTACCGAACGCACCCGTCG

Downstream 100 bases:

>100_bases
AGGCAAATCGAATCGATCGGGAAATATTCTTGAAAAAAATACCGGGGCGGCCGGTGCGAATGCACTAGCGGCGCTGGCCC
ATCTGCACCTGCCGCGACGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS Fold Family; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Hybrid Histidine Kinase; Transcriptional Regulator LuxR Family; Sensory Box Protein; Signal Transduction Histidine Kinase; PAS/PAC Sensor Protein; Histidine Kinase; Sensory Box Histidine Kinase; Nitrate/Nitrite Response Regulator Protein NarL; Transcriptional Regulator LuxR Family Protein; Pas/Pac Sensor Signal Transduction Histidine Kinase; Two Component LuxR Family Transcriptional Regulator; Sensor Protein FixL; PAS Sensor Protein; Diguanylate Cyclase/Phosphodiesterase; Transcriptional Regulator; Chemotaxis Methyltransferase Protein; Signaling GGDEF/EAL Domain-Containing Protein; Sensor Histidine Kinase Domain Protein; Diguanylate Cyclase With PAS/PAC Sensor; Sensor Protein; LuxR Family Two Component Transcriptional Regulator; PasGgdef; Sensory Box-Containing Diguanylate Cyclase; Sensory Box/GGDEF Domain/EAL Domain Protein; Sensory Box Transcriptional Regulator; Sensor Protein PAS/PAS Domain-Containing Protein; Sigma-54 Dependent Trancsriptional Regulator; Sensory Box; Signal Transduction Histidine Kinase-Like Protein; LuxR Family Regulatory Protein; Sensory Transduction Histidine Kinase; Sensory Box GGDEF/EAL Domain-Containing Protein; Histidine Kinase Sensor Protein; Signaling Protein; FOG PAS/PAC Domain Protein; Hybrid Histidine Kinase; Sensory/Regulatory Protein RpfC

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MTQPANEHQPAPADEQALKTHTDRRQLHQIIAGLTEGVILVEPDQRIVWANEAALAMHGVATLAELGADVTEYRERFRLR
DTNHDPVRQGQYPIDRVISGEQFSDVTVEVEAAADESQRWVHRIRSLVLTNAAGEPDCLALVLHDATEWASAEQRFERTF
NANPSPAAICRLSDFRYVKVNQGFLDMTRHALDDVIGRSVYELDVFDRAEHRELAVERLGEGMTIPPMEALLRTADGGDH
AVIVSGQPIDLGDDACMLFTFTDLEPRKQAEMALRQSEERFAKAFRMAPVAMAMLTAERFEILDLNDAFVAMTGHEQGEL
LGRAADEIGLWADPGALREIAAALEGEAVVRMRDVQVTTRDGDLRDCVVSADAVAIHGQDCILMALLDISERKRTEMELI
QAIETAMQDASWFSRTLIEKLANVRRAKAPDAGAQLADLTARERDVFDLLCHGLPDKEIANRLGLAPNTVRNHVATIYTK
LDVHSRGEAIVWARERGIVGADPGAANPAEAAPKAASKSGRTPRRPARK

Sequences:

>Translated_529_residues
MTQPANEHQPAPADEQALKTHTDRRQLHQIIAGLTEGVILVEPDQRIVWANEAALAMHGVATLAELGADVTEYRERFRLR
DTNHDPVRQGQYPIDRVISGEQFSDVTVEVEAAADESQRWVHRIRSLVLTNAAGEPDCLALVLHDATEWASAEQRFERTF
NANPSPAAICRLSDFRYVKVNQGFLDMTRHALDDVIGRSVYELDVFDRAEHRELAVERLGEGMTIPPMEALLRTADGGDH
AVIVSGQPIDLGDDACMLFTFTDLEPRKQAEMALRQSEERFAKAFRMAPVAMAMLTAERFEILDLNDAFVAMTGHEQGEL
LGRAADEIGLWADPGALREIAAALEGEAVVRMRDVQVTTRDGDLRDCVVSADAVAIHGQDCILMALLDISERKRTEMELI
QAIETAMQDASWFSRTLIEKLANVRRAKAPDAGAQLADLTARERDVFDLLCHGLPDKEIANRLGLAPNTVRNHVATIYTK
LDVHSRGEAIVWARERGIVGADPGAANPAEAAPKAASKSGRTPRRPARK
>Mature_528_residues
TQPANEHQPAPADEQALKTHTDRRQLHQIIAGLTEGVILVEPDQRIVWANEAALAMHGVATLAELGADVTEYRERFRLRD
TNHDPVRQGQYPIDRVISGEQFSDVTVEVEAAADESQRWVHRIRSLVLTNAAGEPDCLALVLHDATEWASAEQRFERTFN
ANPSPAAICRLSDFRYVKVNQGFLDMTRHALDDVIGRSVYELDVFDRAEHRELAVERLGEGMTIPPMEALLRTADGGDHA
VIVSGQPIDLGDDACMLFTFTDLEPRKQAEMALRQSEERFAKAFRMAPVAMAMLTAERFEILDLNDAFVAMTGHEQGELL
GRAADEIGLWADPGALREIAAALEGEAVVRMRDVQVTTRDGDLRDCVVSADAVAIHGQDCILMALLDISERKRTEMELIQ
AIETAMQDASWFSRTLIEKLANVRRAKAPDAGAQLADLTARERDVFDLLCHGLPDKEIANRLGLAPNTVRNHVATIYTKL
DVHSRGEAIVWARERGIVGADPGAANPAEAAPKAASKSGRTPRRPARK

Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58399; Mature: 58267

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50112 PAS ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPANEHQPAPADEQALKTHTDRRQLHQIIAGLTEGVILVEPDQRIVWANEAALAMHGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHHHHHHH
ATLAELGADVTEYRERFRLRDTNHDPVRQGQYPIDRVISGEQFSDVTVEVEAAADESQRW
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCHHHHH
VHRIRSLVLTNAAGEPDCLALVLHDATEWASAEQRFERTFNANPSPAAICRLSDFRYVKV
HHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
NQGFLDMTRHALDDVIGRSVYELDVFDRAEHRELAVERLGEGMTIPPMEALLRTADGGDH
CCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCE
AVIVSGQPIDLGDDACMLFTFTDLEPRKQAEMALRQSEERFAKAFRMAPVAMAMLTAERF
EEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
EILDLNDAFVAMTGHEQGELLGRAADEIGLWADPGALREIAAALEGEAVVRMRDVQVTTR
EEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEC
DGDLRDCVVSADAVAIHGQDCILMALLDISERKRTEMELIQAIETAMQDASWFSRTLIEK
CCCHHHHHEECCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LANVRRAKAPDAGAQLADLTARERDVFDLLCHGLPDKEIANRLGLAPNTVRNHVATIYTK
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHEE
LDVHSRGEAIVWARERGIVGADPGAANPAEAAPKAASKSGRTPRRPARK
EEECCCCCEEEEEECCCCEECCCCCCCCHHHCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TQPANEHQPAPADEQALKTHTDRRQLHQIIAGLTEGVILVEPDQRIVWANEAALAMHGV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHHHHHHH
ATLAELGADVTEYRERFRLRDTNHDPVRQGQYPIDRVISGEQFSDVTVEVEAAADESQRW
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCHHHHH
VHRIRSLVLTNAAGEPDCLALVLHDATEWASAEQRFERTFNANPSPAAICRLSDFRYVKV
HHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
NQGFLDMTRHALDDVIGRSVYELDVFDRAEHRELAVERLGEGMTIPPMEALLRTADGGDH
CCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCE
AVIVSGQPIDLGDDACMLFTFTDLEPRKQAEMALRQSEERFAKAFRMAPVAMAMLTAERF
EEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
EILDLNDAFVAMTGHEQGELLGRAADEIGLWADPGALREIAAALEGEAVVRMRDVQVTTR
EEEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEEC
DGDLRDCVVSADAVAIHGQDCILMALLDISERKRTEMELIQAIETAMQDASWFSRTLIEK
CCCHHHHHEECCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LANVRRAKAPDAGAQLADLTARERDVFDLLCHGLPDKEIANRLGLAPNTVRNHVATIYTK
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHEE
LDVHSRGEAIVWARERGIVGADPGAANPAEAAPKAASKSGRTPRRPARK
EEECCCCCEEEEEECCCCEECCCCCCCCHHHCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA