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The map label for this gene is nahR [H]

Identifier: 238025024

GI number: 238025024

Start: 2106569

End: 2107498

Strand: Direct

Name: nahR [H]

Synonym: bglu_2g16810

Alternate gene names: 238025024

Gene position: 2106569-2107498 (Clockwise)

Preceding gene: 238025017

Following gene: 238025025

Centisome position: 74.51

GC content: 73.55

Gene sequence:

>930_bases
GTGAGTTCCGACCTGCGCCTCGACCTGAACCTGTTCCGCGTGCTCGACGCGATCTACGTCCACGGCGGCATCAGCGCGGC
CGCGCGCGCGCTGCATCTGACGCAGCCGGCCGTCACGCACGCGCTGAACCGGCTGCGCAGCCACTTCGGCGATCCGCTGT
TCGTGCGCCAGGGCAACCGCGTCACGCCCACCGAGCGCACGCGCGCCGTGATCGCCGACGTGCAGCGGCACCTGAAGGGC
CTGCAGGCCGCCGTCCACGCGCAGGCCAGCTTCGTGCCGGCCACCGTCGAGCAGCGCTTCGTGGTGGGGGTGCGCGACGT
GCTCGAATCGATCGCGCTGCCGCAGCTCGCCGAGCGGCTCGCCCGCGAGGCGCCGCGCGTCACGCTGGTGAGCCGGCGCG
TGGCGCTGGCCGACCTGGGCCGCGAGCTGGCCGGCGGTCAGCTCGACCTCGCGGTCGAGCGCCGCGTGCCCACCGGCCCG
CAGGTGGTGCGCGACGCGCTGGCCGACGACGCGCTGGTGGTGGTGCTGCGCCGCGATCATCCGCTCGCGGCCGGGCCGCT
GCGCCGCGCCGACTATTTCGCGGCACGCCACGTGAGCGTTTCGCCGCTCGGCGAGCCGAATTCGCTCGACGTGCTGCTGG
CCGCCGACGGCAAGTTCCGGAGCATCCAGCTGACCTGCCAGCATTATTTCGCCGCCTGCCAGATCGCGGCGGCGGGCGAC
CTGCTGCTGACGCTGCCGCGCTCCTACGCGCTGCGCATGACGGGGCTGCTGCCGATCGTCGTCAAGCCGCTGCCGCTGCG
CGTGAAGCCCTATGCCATCCATGTCTACTGGCACGAGTCGCGCGACGCGGACCGCGTGCATCGCTGGTTTCGCGAACGCG
TGGCCGCGATCGTGCGCGAGGCGGCACGCGGCGGCGACGGGCTGCCCTGA

Upstream 100 bases:

>100_bases
GATTGATCCGATCGATGAAATGAATGTTCTTCATGTCGGGACATCAATGCAAGTAATATGCGGAATCGCCGCTGCCGCGG
CCTTCCCACGCCGCCCGCCC

Downstream 100 bases:

>100_bases
CCTCGGCGCCCGCCGCGCCGCCCCGCGCGCGCGGGGCTGCGGGGCCGGGCGGCGGGCGCTTGACGACAGGCGCGCGGCAA
CCCGTTTATGCTATCGCTGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSSDLRLDLNLFRVLDAIYVHGGISAAARALHLTQPAVTHALNRLRSHFGDPLFVRQGNRVTPTERTRAVIADVQRHLKG
LQAAVHAQASFVPATVEQRFVVGVRDVLESIALPQLAERLAREAPRVTLVSRRVALADLGRELAGGQLDLAVERRVPTGP
QVVRDALADDALVVVLRRDHPLAAGPLRRADYFAARHVSVSPLGEPNSLDVLLAADGKFRSIQLTCQHYFAACQIAAAGD
LLLTLPRSYALRMTGLLPIVVKPLPLRVKPYAIHVYWHESRDADRVHRWFRERVAAIVREAARGGDGLP

Sequences:

>Translated_309_residues
MSSDLRLDLNLFRVLDAIYVHGGISAAARALHLTQPAVTHALNRLRSHFGDPLFVRQGNRVTPTERTRAVIADVQRHLKG
LQAAVHAQASFVPATVEQRFVVGVRDVLESIALPQLAERLAREAPRVTLVSRRVALADLGRELAGGQLDLAVERRVPTGP
QVVRDALADDALVVVLRRDHPLAAGPLRRADYFAARHVSVSPLGEPNSLDVLLAADGKFRSIQLTCQHYFAACQIAAAGD
LLLTLPRSYALRMTGLLPIVVKPLPLRVKPYAIHVYWHESRDADRVHRWFRERVAAIVREAARGGDGLP
>Mature_308_residues
SSDLRLDLNLFRVLDAIYVHGGISAAARALHLTQPAVTHALNRLRSHFGDPLFVRQGNRVTPTERTRAVIADVQRHLKGL
QAAVHAQASFVPATVEQRFVVGVRDVLESIALPQLAERLAREAPRVTLVSRRVALADLGRELAGGQLDLAVERRVPTGPQ
VVRDALADDALVVVLRRDHPLAAGPLRRADYFAARHVSVSPLGEPNSLDVLLAADGKFRSIQLTCQHYFAACQIAAAGDL
LLTLPRSYALRMTGLLPIVVKPLPLRVKPYAIHVYWHESRDADRVHRWFRERVAAIVREAARGGDGLP

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=298, Percent_Identity=26.510067114094, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87081766, Length=262, Percent_Identity=25.9541984732824, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786820, Length=81, Percent_Identity=38.2716049382716, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33990; Mature: 33859

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDLRLDLNLFRVLDAIYVHGGISAAARALHLTQPAVTHALNRLRSHFGDPLFVRQGNR
CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCC
VTPTERTRAVIADVQRHLKGLQAAVHAQASFVPATVEQRFVVGVRDVLESIALPQLAERL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
AREAPRVTLVSRRVALADLGRELAGGQLDLAVERRVPTGPQVVRDALADDALVVVLRRDH
HHHCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCC
PLAAGPLRRADYFAARHVSVSPLGEPNSLDVLLAADGKFRSIQLTCQHYFAACQIAAAGD
CCCCCCCHHHHHHHHCCCEECCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHCCCC
LLLTLPRSYALRMTGLLPIVVKPLPLRVKPYAIHVYWHESRDADRVHRWFRERVAAIVRE
EEEECCHHHHHHHHCCHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
AARGGDGLP
HHCCCCCCC
>Mature Secondary Structure 
SSDLRLDLNLFRVLDAIYVHGGISAAARALHLTQPAVTHALNRLRSHFGDPLFVRQGNR
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCC
VTPTERTRAVIADVQRHLKGLQAAVHAQASFVPATVEQRFVVGVRDVLESIALPQLAERL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
AREAPRVTLVSRRVALADLGRELAGGQLDLAVERRVPTGPQVVRDALADDALVVVLRRDH
HHHCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCC
PLAAGPLRRADYFAARHVSVSPLGEPNSLDVLLAADGKFRSIQLTCQHYFAACQIAAAGD
CCCCCCCHHHHHHHHCCCEECCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHCCCC
LLLTLPRSYALRMTGLLPIVVKPLPLRVKPYAIHVYWHESRDADRVHRWFRERVAAIVRE
EEEECCHHHHHHHHCCHHHHCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
AARGGDGLP
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]