| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025016
Identifier: 238025016
GI number: 238025016
Start: 2098178
End: 2099338
Strand: Direct
Name: 238025016
Synonym: bglu_2g16730
Alternate gene names: NA
Gene position: 2098178-2099338 (Clockwise)
Preceding gene: 238025015
Following gene: 238025017
Centisome position: 74.21
GC content: 73.04
Gene sequence:
>1161_bases ATGACCCCGCGAGCCTTCCGGATCGACATCCCGCAAGCGCAGCTCGACGACCTGCGCCAGCGCCTGCGTGCCACGCGCCT GCCCGCCGCGCTCGATGCCGAGCGCTGGGACGACGGCGCGAGCCTCGCGTTCATGCGGCGGCTGGCCGACCACTGGCTGC ACCGCTTCGACTGGCGCGCGCAGGAGGCGCGGCTGAACCGCCTGCCCCACTATCGGGCGAACCTCGACGGCCTCGACATC CATTTCGTCCACCAGCGCGGCACCGGGCCGGCGCCGCTGCCGCTGCTGCTCACGCACGGCTGGCCCGGCTCGTTCGTCGA GATGGAGCACGTGATTCCGATGCTCGCCGACCCCGCCGCGCACGGCGGCGACGCGGCCGACGCGTTCCATGTGGTGGTGC CGTCGCTGCCCGGCTTCGGCTTCTCCGCGCCGCCGGCCGGCCCCGGCATGAGCGCCTGGCGCGTCGCCGGCCTGTGGCGC ACGCTGATGCAGACGCTGGGCTATGAACGCTTCGCCGCGCAGGGCGGCGACATCGGCGCGGCGGTCTCGATGTGGCTCGC GCGCCGCTTTCCCGAGCAGTTGGCCGGCCTGCATCTGCACTACGTTCCCGGCAGCTACCGGCCGCCGCTCGGCGCCGGCC TGCCGCCCGTGACGGGCGCCGAGCAGGCCTACCTCGATACCGCCGCGGCGTGGTCGGCCAGCGAAGGCGCCTACGCGGCC GAGCAAGCCACCCGGCCGCAGACGCTGGCCTATGCGATGACGGATTCGCCGCTCGGCCTCGCGGCCTGGATGGTCGAGAA ATTCCGCGCCTGGAGCGACTGCGACGGCGAGCTCGAGCGCGTCTTCACGCTCGACGCGCTGCTGACCGGCATCTCGATCT ACTGGTTCGGCGGCATGCTCGACGCCTCGTTTCGCATCTACAAGGAGAATCGCGCGCGTCCGCTCGCGTTCCATGCCCAG GAGCGCGTGCTCCCGCCGCTCGGCATGGCCGCGTTTCCGCGCGAACTGCCGACGCCGCCGCGCTCGTGGCTCGAACGCGT GTTCGAGGTGCGGCGCTGGACCGCGATGCCGCGCGGCGGGCACTTCGCGGCGCTGGAGCAGCCGGCGTTGCTGGTCGAGG AGATCCGCGCGTTCTTCCGGCCGCTGCGCAACGCAGGCTGA
Upstream 100 bases:
>100_bases GGCGGCGTAGCGCGTCCGGCCGGCAGGCCCGCATTGGGCTACCATGACTCGCCGCCCCGGCCCCCACGCCACCGCATCGT GACGAGACAGGAACCGCGCC
Downstream 100 bases:
>100_bases CGCGCGCCGATCAGGTGCGGCAGCCGGCCCGCCGGTGGCGGCGAGCCCGCGCCCCGCGCCGCTTTTCACGGGCCCGCGCG CGCCGATTGACAAGCCGTGG
Product: Epoxide hydrolase-like protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTPRAFRIDIPQAQLDDLRQRLRATRLPAALDAERWDDGASLAFMRRLADHWLHRFDWRAQEARLNRLPHYRANLDGLDI HFVHQRGTGPAPLPLLLTHGWPGSFVEMEHVIPMLADPAAHGGDAADAFHVVVPSLPGFGFSAPPAGPGMSAWRVAGLWR TLMQTLGYERFAAQGGDIGAAVSMWLARRFPEQLAGLHLHYVPGSYRPPLGAGLPPVTGAEQAYLDTAAAWSASEGAYAA EQATRPQTLAYAMTDSPLGLAAWMVEKFRAWSDCDGELERVFTLDALLTGISIYWFGGMLDASFRIYKENRARPLAFHAQ ERVLPPLGMAAFPRELPTPPRSWLERVFEVRRWTAMPRGGHFAALEQPALLVEEIRAFFRPLRNAG
Sequences:
>Translated_386_residues MTPRAFRIDIPQAQLDDLRQRLRATRLPAALDAERWDDGASLAFMRRLADHWLHRFDWRAQEARLNRLPHYRANLDGLDI HFVHQRGTGPAPLPLLLTHGWPGSFVEMEHVIPMLADPAAHGGDAADAFHVVVPSLPGFGFSAPPAGPGMSAWRVAGLWR TLMQTLGYERFAAQGGDIGAAVSMWLARRFPEQLAGLHLHYVPGSYRPPLGAGLPPVTGAEQAYLDTAAAWSASEGAYAA EQATRPQTLAYAMTDSPLGLAAWMVEKFRAWSDCDGELERVFTLDALLTGISIYWFGGMLDASFRIYKENRARPLAFHAQ ERVLPPLGMAAFPRELPTPPRSWLERVFEVRRWTAMPRGGHFAALEQPALLVEEIRAFFRPLRNAG >Mature_385_residues TPRAFRIDIPQAQLDDLRQRLRATRLPAALDAERWDDGASLAFMRRLADHWLHRFDWRAQEARLNRLPHYRANLDGLDIH FVHQRGTGPAPLPLLLTHGWPGSFVEMEHVIPMLADPAAHGGDAADAFHVVVPSLPGFGFSAPPAGPGMSAWRVAGLWRT LMQTLGYERFAAQGGDIGAAVSMWLARRFPEQLAGLHLHYVPGSYRPPLGAGLPPVTGAEQAYLDTAAAWSASEGAYAAE QATRPQTLAYAMTDSPLGLAAWMVEKFRAWSDCDGELERVFTLDALLTGISIYWFGGMLDASFRIYKENRARPLAFHAQE RVLPPLGMAAFPRELPTPPRSWLERVFEVRRWTAMPRGGHFAALEQPALLVEEIRAFFRPLRNAG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=405, Percent_Identity=36.2962962962963, Blast_Score=265, Evalue=5e-71, Organism=Homo sapiens, GI209862837, Length=405, Percent_Identity=36.2962962962963, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI17564944, Length=408, Percent_Identity=33.578431372549, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI193207462, Length=416, Percent_Identity=25.4807692307692, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI19922580, Length=400, Percent_Identity=31.75, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI20130139, Length=399, Percent_Identity=31.077694235589, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI24655327, Length=408, Percent_Identity=30.6372549019608, Blast_Score=174, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 42939; Mature: 42807
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRAFRIDIPQAQLDDLRQRLRATRLPAALDAERWDDGASLAFMRRLADHWLHRFDWRA CCCCEEEEECCHHHHHHHHHHHHHHCCCCHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCH QEARLNRLPHYRANLDGLDIHFVHQRGTGPAPLPLLLTHGWPGSFVEMEHVIPMLADPAA HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC HGGDAADAFHVVVPSLPGFGFSAPPAGPGMSAWRVAGLWRTLMQTLGYERFAAQGGDIGA CCCCCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH AVSMWLARRFPEQLAGLHLHYVPGSYRPPLGAGLPPVTGAEQAYLDTAAAWSASEGAYAA HHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH EQATRPQTLAYAMTDSPLGLAAWMVEKFRAWSDCDGELERVFTLDALLTGISIYWFGGML HHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH DASFRIYKENRARPLAFHAQERVLPPLGMAAFPRELPTPPRSWLERVFEVRRWTAMPRGG CCCEEEEECCCCCCEEECHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC HFAALEQPALLVEEIRAFFRPLRNAG CCHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPRAFRIDIPQAQLDDLRQRLRATRLPAALDAERWDDGASLAFMRRLADHWLHRFDWRA CCCEEEEECCHHHHHHHHHHHHHHCCCCHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCH QEARLNRLPHYRANLDGLDIHFVHQRGTGPAPLPLLLTHGWPGSFVEMEHVIPMLADPAA HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC HGGDAADAFHVVVPSLPGFGFSAPPAGPGMSAWRVAGLWRTLMQTLGYERFAAQGGDIGA CCCCCCCHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH AVSMWLARRFPEQLAGLHLHYVPGSYRPPLGAGLPPVTGAEQAYLDTAAAWSASEGAYAA HHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH EQATRPQTLAYAMTDSPLGLAAWMVEKFRAWSDCDGELERVFTLDALLTGISIYWFGGML HHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH DASFRIYKENRARPLAFHAQERVLPPLGMAAFPRELPTPPRSWLERVFEVRRWTAMPRGG CCCEEEEECCCCCCEEECHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC HFAALEQPALLVEEIRAFFRPLRNAG CCHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]