| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is xanB [H]
Identifier: 238024997
GI number: 238024997
Start: 2078397
End: 2079971
Strand: Direct
Name: xanB [H]
Synonym: bglu_2g16540
Alternate gene names: 238024997
Gene position: 2078397-2079971 (Clockwise)
Preceding gene: 238024986
Following gene: 238024999
Centisome position: 73.51
GC content: 70.73
Gene sequence:
>1575_bases ATGAATCCTCCCTCCGTCGTCGGCCGCGCGCCGACCGCCGCCGCGCCGGCCGCGGCTCCCGCCCGCGCCGCCGCTGCCGC TGGCGGCGCGACCCAGGGCGCCGCGACGGCCGCCCGCGTGGCCGTGCAGCCCGTGGTGCTGGCGGGCGGCTCCGGCACGC GGCTCTGGCCGATGTCGCGTGAACAGTTCCCGAAACAGCTGATCGGCCTGCTTGGCGACGAATCGCTGCTGCAGTCGACC ACGCGCCGCCTCGACGGCTACGCGGGCGATCATCCGGTCTCCGAACGACTGATGGTGGTGTGCGGCGACGATCACCGCTT CACGACCGCCGAGCAACTGCGCCTGGCCGGCAAGGACGCGTCGATCGTGCTCGAGCCGTTCGGCCGCGACACCGCGCCGG CGCTGACGATCGCGGCGCTGCGCATCGCCGCCCAGGCCGGCGATGCGGTGATGACGGTGATGCCGGCCGATCACGCGCTG GCCGATCTGGCGCGCTTCCAGGCTGCGCTCGAGGCCGGCATCCGCCACGCGATGCAAGGCCGGATCGCCACCATGGGCAT CCTGCCGACGCACGCCGAAACCGGCTACGGCTACATCCGCGTGGGCCGCCCGATCGACGCCGGCGGCGAGGGCACCCTGG AAGTGCGCAAGCTCGCGGGCTTCGTCGAGAAGCCGCACCTGGAGCTCGCGCAGCAATACGTGAGCGCCGGCGACTACTGG TGGAACAGCGGCATCTTCATCGTGCGCGCCTCGGTCTGGCTCAAGGCGATCCGCCACTTCCAGCCCGCCATCCACGCGGC CTGCGAGCAGGCGGTGGCGCTCGGCCACGACGACGGCACGTTCTTCCGCCTGCACCGCGAGAGCTTTGCCGCCTCGCCGG CGAACTCGATCGACTATTCGGTGATGGAGCCGCTCGTCAACGCGCCGGAGGTCTGCGAAAGCGTGGTGGTGCCGCTGGAC GCCGGCTGGTCGGACGTCGGCTCGTGGGACGCGCTGTGGCAGATCTCCGAGAAGGACGAAAGCGGCAACGTGGCGCGCGG GGCGGTGATGCTGGAAGGCGCGGCCTCCACCTTCGCGCACTCCGAGGGCCGGCTGATCGCCTGCGTCGGCACCCGCGACC TGGTCGTGGTGGAAACGCCCGACGCGGTGCTGGTGGCCGACCGGGCGCACGTGCAGGACGTCAAGAAGATCGTCGGCCGC CTGAAGGGCGCGGCGCGCGCGGAGGCGTCGAATCATCGGAAGGTGCATCGCCCGTGGGGCCACTATGATTCGGTCGACAT GGGCGAGCGCTTCCAGGTCAAGCGGATCGTCGTGAAGCCGGGCGCGCAGCTCTCGCTGCAGATGCATCACCACCGCGCCG AGCACTGGATCGTGGTGTGCGGCACGGCGCGCATCACGCGCGGCGAGGACACGTTCCTGCTGTCCGAGAACGAATCGACC TACATTCCGCTCGGCGTCACGCACCGGCTCGAAAATCCGGGCAAGATGCCGCTGGAGCTGATCGAAGTGCAGTCGGGAGC ATATCTCGGCGAGGACGACATCGTCCGCTTCGACGACACCTACGGCCGCGGCTGA
Upstream 100 bases:
>100_bases CGGCCGCACTTCGATGCTGCAGTGCAGAAAATCGATTTTTCTCACCATTAATGACGTGATAAAAACCTGAGGACCGATCC ACGTTTTCGAGGAGTACACG
Downstream 100 bases:
>100_bases CCGTTCCCGGCAGCGGCTGCCGCCCCCTGCTTGCCCGCGGTTCCCTCGCACCGCCGCCCGCCCGGTCTTCCGGGCGGGCG GCGGCTCGTCATGGCGCGGC
Product: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MNPPSVVGRAPTAAAPAAAPARAAAAAGGATQGAATAARVAVQPVVLAGGSGTRLWPMSREQFPKQLIGLLGDESLLQST TRRLDGYAGDHPVSERLMVVCGDDHRFTTAEQLRLAGKDASIVLEPFGRDTAPALTIAALRIAAQAGDAVMTVMPADHAL ADLARFQAALEAGIRHAMQGRIATMGILPTHAETGYGYIRVGRPIDAGGEGTLEVRKLAGFVEKPHLELAQQYVSAGDYW WNSGIFIVRASVWLKAIRHFQPAIHAACEQAVALGHDDGTFFRLHRESFAASPANSIDYSVMEPLVNAPEVCESVVVPLD AGWSDVGSWDALWQISEKDESGNVARGAVMLEGAASTFAHSEGRLIACVGTRDLVVVETPDAVLVADRAHVQDVKKIVGR LKGAARAEASNHRKVHRPWGHYDSVDMGERFQVKRIVVKPGAQLSLQMHHHRAEHWIVVCGTARITRGEDTFLLSENEST YIPLGVTHRLENPGKMPLELIEVQSGAYLGEDDIVRFDDTYGRG
Sequences:
>Translated_524_residues MNPPSVVGRAPTAAAPAAAPARAAAAAGGATQGAATAARVAVQPVVLAGGSGTRLWPMSREQFPKQLIGLLGDESLLQST TRRLDGYAGDHPVSERLMVVCGDDHRFTTAEQLRLAGKDASIVLEPFGRDTAPALTIAALRIAAQAGDAVMTVMPADHAL ADLARFQAALEAGIRHAMQGRIATMGILPTHAETGYGYIRVGRPIDAGGEGTLEVRKLAGFVEKPHLELAQQYVSAGDYW WNSGIFIVRASVWLKAIRHFQPAIHAACEQAVALGHDDGTFFRLHRESFAASPANSIDYSVMEPLVNAPEVCESVVVPLD AGWSDVGSWDALWQISEKDESGNVARGAVMLEGAASTFAHSEGRLIACVGTRDLVVVETPDAVLVADRAHVQDVKKIVGR LKGAARAEASNHRKVHRPWGHYDSVDMGERFQVKRIVVKPGAQLSLQMHHHRAEHWIVVCGTARITRGEDTFLLSENEST YIPLGVTHRLENPGKMPLELIEVQSGAYLGEDDIVRFDDTYGRG >Mature_524_residues MNPPSVVGRAPTAAAPAAAPARAAAAAGGATQGAATAARVAVQPVVLAGGSGTRLWPMSREQFPKQLIGLLGDESLLQST TRRLDGYAGDHPVSERLMVVCGDDHRFTTAEQLRLAGKDASIVLEPFGRDTAPALTIAALRIAAQAGDAVMTVMPADHAL ADLARFQAALEAGIRHAMQGRIATMGILPTHAETGYGYIRVGRPIDAGGEGTLEVRKLAGFVEKPHLELAQQYVSAGDYW WNSGIFIVRASVWLKAIRHFQPAIHAACEQAVALGHDDGTFFRLHRESFAASPANSIDYSVMEPLVNAPEVCESVVVPLD AGWSDVGSWDALWQISEKDESGNVARGAVMLEGAASTFAHSEGRLIACVGTRDLVVVETPDAVLVADRAHVQDVKKIVGR LKGAARAEASNHRKVHRPWGHYDSVDMGERFQVKRIVVKPGAQLSLQMHHHRAEHWIVVCGTARITRGEDTFLLSENEST YIPLGVTHRLENPGKMPLELIEVQSGAYLGEDDIVRFDDTYGRG
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=489, Percent_Identity=51.7382413087935, Blast_Score=490, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 56239; Mature: 56239
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPSVVGRAPTAAAPAAAPARAAAAAGGATQGAATAARVAVQPVVLAGGSGTRLWPMSR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHEECEEEEECCCCCEECCCCH EQFPKQLIGLLGDESLLQSTTRRLDGYAGDHPVSERLMVVCGDDHRFTTAEQLRLAGKDA HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC SIVLEPFGRDTAPALTIAALRIAAQAGDAVMTVMPADHALADLARFQAALEAGIRHAMQG EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC RIATMGILPTHAETGYGYIRVGRPIDAGGEGTLEVRKLAGFVEKPHLELAQQYVSAGDYW CEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCE WNSGIFIVRASVWLKAIRHFQPAIHAACEQAVALGHDDGTFFRLHRESFAASPANSIDYS ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCHH VMEPLVNAPEVCESVVVPLDAGWSDVGSWDALWQISEKDESGNVARGAVMLEGAASTFAH HHHHHCCCHHHHHHEEEECCCCCCCCCCCHHEEEEECCCCCCCEEECEEEEECCHHHHCC SEGRLIACVGTRDLVVVETPDAVLVADRAHVQDVKKIVGRLKGAARAEASNHRKVHRPWG CCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCC HYDSVDMGERFQVKRIVVKPGAQLSLQMHHHRAEHWIVVCGTARITRGEDTFLLSENEST CCCCCCCCCCEEEEEEEECCCCCEEEEEHHCCCCEEEEEECCEEEECCCCEEEEECCCCE YIPLGVTHRLENPGKMPLELIEVQSGAYLGEDDIVRFDDTYGRG EEEEEEEECCCCCCCCCEEEEEECCCCEECCCCEEEECCCCCCC >Mature Secondary Structure MNPPSVVGRAPTAAAPAAAPARAAAAAGGATQGAATAARVAVQPVVLAGGSGTRLWPMSR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHEECEEEEECCCCCEECCCCH EQFPKQLIGLLGDESLLQSTTRRLDGYAGDHPVSERLMVVCGDDHRFTTAEQLRLAGKDA HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCC SIVLEPFGRDTAPALTIAALRIAAQAGDAVMTVMPADHALADLARFQAALEAGIRHAMQG EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC RIATMGILPTHAETGYGYIRVGRPIDAGGEGTLEVRKLAGFVEKPHLELAQQYVSAGDYW CEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCE WNSGIFIVRASVWLKAIRHFQPAIHAACEQAVALGHDDGTFFRLHRESFAASPANSIDYS ECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCHH VMEPLVNAPEVCESVVVPLDAGWSDVGSWDALWQISEKDESGNVARGAVMLEGAASTFAH HHHHHCCCHHHHHHEEEECCCCCCCCCCCHHEEEEECCCCCCCEEECEEEEECCHHHHCC SEGRLIACVGTRDLVVVETPDAVLVADRAHVQDVKKIVGRLKGAARAEASNHRKVHRPWG CCCCEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCC HYDSVDMGERFQVKRIVVKPGAQLSLQMHHHRAEHWIVVCGTARITRGEDTFLLSENEST CCCCCCCCCCEEEEEEEECCCCCEEEEEHHCCCCEEEEEECCEEEECCCCEEEEECCCCE YIPLGVTHRLENPGKMPLELIEVQSGAYLGEDDIVRFDDTYGRG EEEEEEEECCCCCCCCCEEEEEECCCCEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]