Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is 238024989

Identifier: 238024989

GI number: 238024989

Start: 2067408

End: 2068892

Strand: Reverse

Name: 238024989

Synonym: bglu_2g16460

Alternate gene names: NA

Gene position: 2068892-2067408 (Counterclockwise)

Preceding gene: 238024990

Following gene: 238024988

Centisome position: 73.17

GC content: 68.69

Gene sequence:

>1485_bases
ATGAGCACGCCCGCCGTCCCCGCTGCCGCGCCCCCGCAGGCACGCGCGCGCCAGCACGCGCGCCGCCTGCTGGGCGAGCC
GAAACACTGGGCCGCGCAGACCGGCCTCTGGACCCTCACCGCGCTGCTGATCCTGGCCCACCAGGGCACGGTGCTCACCC
TCGCGTTCCCGGCGCTGTCGATCGCCACCGGCCTGTGGCTGTATTTCCGCAGCCCGGCGCGCTACGTCGGCTTTCTCTGG
TGGATGTGGTTCCTCGGTCCCGAGGTGCGCCGGCTCGCCGACTGGTCGCGCGGCGCCTACACGCCCACCAGCCTGATCCA
GATCGCGCCGCTCGCGGTCACCATGATCGCGGGGCTCGGCCTGCTGCGCCACTACCGCGTGCTCGCGCAGCGGCGCGGGC
TGCCGATGCTGATGATCCTGCTCGGGCTCGGCTACGCCTATCTGGTGGGGCTGGTCTCCTCGGGCGTGCTGGCCGCCACC
TACGATCTGGCGAACTGGCTCTACCCGGTGCTGATCGGCTTCCACATCGCCGTGAACGCGCGCGACTACCCGGAATACCG
CGAGGTGATCATGTCCACCTTCATCTGGGGGATGCTGGTGATGGGCGCCTACGGGATGGTGCAGTTCTTCGTCATGCCGA
GCTGGGACGTGTTGTGGATGGTCGGCTCGCAGATGGCCTCGCAGGGCGAGCCGGTGGCCTACGGCGTGCGCGTGTTCAGC
ACCATGAATTCGTCCGGGCCGTTCGCGTTCGCGATGATGGGCGCGCTGATCTTCATGCTGGCCGCGACCCAGCGCGTGCG
CTGGCTGGCCGGCGCGGCCGGCTTCATCGCCTTCATGCTGTGCCTGGTGCGCTCGACCTGGGGCGGCTGGGTGATCGCGC
TCGCGGTGCAGCTCGCCAAGTCGTCGAACCGCGTGCGGGTGCGCATGGTGGTGGGCGCGATGGTGCTGGCCGGGCTGTCG
GTGCCGCTGCTCACGATCGGCCCGGTGGCCGACCGGCTCGGCCAGCGGCTCGCCTCGATCACCAACCTCAAGGACGACCG
CAGCTACGACGATCGCAACAAGTTCTACGCCACCTTCGCGCAGACCGCGTTCACCGACGTGGCGGGCGAGGGGCTCGGCG
CGACCGGCTCGTCCACCAAGCTGTCGAGCGACAGCGGCGAGCTCGGCAAATACGGCAGCTTCGACAGCGGCGTGATGAAC
GTGCCGTTCGTGCTCGGCTGGCCCGGCACGCTGCTCTACCTGTCCGGCACGCTATGGCTGCTCGCGCGTGCGCTGCGCGT
CTCGTTCCGGCTCAAGCAGGACAAGTACGTGGCCGCCTGCGTGAGCCTCGCGATCTCGATCTTCGCGATGCTCGTCTTCA
CCAACTCCCTGATCGGTACGGGAGGGTCGTTGCTGTTCATGAGTTTGTTTTCGATCTTGTCCGCGTCGCACTGGCAGAAG
ATCCAGCGAGCCGCCGCCGGACGCATACGGGGAGTAGACCAATGA

Upstream 100 bases:

>100_bases
ATCACGCGCGAGCTGCTGCAGCGCCGCCGCGCGCCGGCCGGCGCCGCCGCGCCGCTGCCGCTGGCCGATTCGCGCACGCC
GTCCAACTGAGCGCGCCGCC

Downstream 100 bases:

>100_bases
GAATCGCCATCGTCACCCACGTGGTACGCCACAACGACGGGCAGGGGCGCGTCAACTACGAGATCGCGCGCGCGGCGCTG
GCCGAGCAGTGCGACGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MSTPAVPAAAPPQARARQHARRLLGEPKHWAAQTGLWTLTALLILAHQGTVLTLAFPALSIATGLWLYFRSPARYVGFLW
WMWFLGPEVRRLADWSRGAYTPTSLIQIAPLAVTMIAGLGLLRHYRVLAQRRGLPMLMILLGLGYAYLVGLVSSGVLAAT
YDLANWLYPVLIGFHIAVNARDYPEYREVIMSTFIWGMLVMGAYGMVQFFVMPSWDVLWMVGSQMASQGEPVAYGVRVFS
TMNSSGPFAFAMMGALIFMLAATQRVRWLAGAAGFIAFMLCLVRSTWGGWVIALAVQLAKSSNRVRVRMVVGAMVLAGLS
VPLLTIGPVADRLGQRLASITNLKDDRSYDDRNKFYATFAQTAFTDVAGEGLGATGSSTKLSSDSGELGKYGSFDSGVMN
VPFVLGWPGTLLYLSGTLWLLARALRVSFRLKQDKYVAACVSLAISIFAMLVFTNSLIGTGGSLLFMSLFSILSASHWQK
IQRAAAGRIRGVDQ

Sequences:

>Translated_494_residues
MSTPAVPAAAPPQARARQHARRLLGEPKHWAAQTGLWTLTALLILAHQGTVLTLAFPALSIATGLWLYFRSPARYVGFLW
WMWFLGPEVRRLADWSRGAYTPTSLIQIAPLAVTMIAGLGLLRHYRVLAQRRGLPMLMILLGLGYAYLVGLVSSGVLAAT
YDLANWLYPVLIGFHIAVNARDYPEYREVIMSTFIWGMLVMGAYGMVQFFVMPSWDVLWMVGSQMASQGEPVAYGVRVFS
TMNSSGPFAFAMMGALIFMLAATQRVRWLAGAAGFIAFMLCLVRSTWGGWVIALAVQLAKSSNRVRVRMVVGAMVLAGLS
VPLLTIGPVADRLGQRLASITNLKDDRSYDDRNKFYATFAQTAFTDVAGEGLGATGSSTKLSSDSGELGKYGSFDSGVMN
VPFVLGWPGTLLYLSGTLWLLARALRVSFRLKQDKYVAACVSLAISIFAMLVFTNSLIGTGGSLLFMSLFSILSASHWQK
IQRAAAGRIRGVDQ
>Mature_493_residues
STPAVPAAAPPQARARQHARRLLGEPKHWAAQTGLWTLTALLILAHQGTVLTLAFPALSIATGLWLYFRSPARYVGFLWW
MWFLGPEVRRLADWSRGAYTPTSLIQIAPLAVTMIAGLGLLRHYRVLAQRRGLPMLMILLGLGYAYLVGLVSSGVLAATY
DLANWLYPVLIGFHIAVNARDYPEYREVIMSTFIWGMLVMGAYGMVQFFVMPSWDVLWMVGSQMASQGEPVAYGVRVFST
MNSSGPFAFAMMGALIFMLAATQRVRWLAGAAGFIAFMLCLVRSTWGGWVIALAVQLAKSSNRVRVRMVVGAMVLAGLSV
PLLTIGPVADRLGQRLASITNLKDDRSYDDRNKFYATFAQTAFTDVAGEGLGATGSSTKLSSDSGELGKYGSFDSGVMNV
PFVLGWPGTLLYLSGTLWLLARALRVSFRLKQDKYVAACVSLAISIFAMLVFTNSLIGTGGSLLFMSLFSILSASHWQKI
QRAAAGRIRGVDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53897; Mature: 53766

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAVPAAAPPQARARQHARRLLGEPKHWAAQTGLWTLTALLILAHQGTVLTLAFPALS
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
IATGLWLYFRSPARYVGFLWWMWFLGPEVRRLADWSRGAYTPTSLIQIAPLAVTMIAGLG
HHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LLRHYRVLAQRRGLPMLMILLGLGYAYLVGLVSSGVLAATYDLANWLYPVLIGFHIAVNA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECC
RDYPEYREVIMSTFIWGMLVMGAYGMVQFFVMPSWDVLWMVGSQMASQGEPVAYGVRVFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
TMNSSGPFAFAMMGALIFMLAATQRVRWLAGAAGFIAFMLCLVRSTWGGWVIALAVQLAK
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SSNRVRVRMVVGAMVLAGLSVPLLTIGPVADRLGQRLASITNLKDDRSYDDRNKFYATFA
CCCCEEEHHHHHHHHHHHCCCCHHEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
QTAFTDVAGEGLGATGSSTKLSSDSGELGKYGSFDSGVMNVPFVLGWPGTLLYLSGTLWL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
LARALRVSFRLKQDKYVAACVSLAISIFAMLVFTNSLIGTGGSLLFMSLFSILSASHWQK
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IQRAAAGRIRGVDQ
HHHHHHHCCCCCCC
>Mature Secondary Structure 
STPAVPAAAPPQARARQHARRLLGEPKHWAAQTGLWTLTALLILAHQGTVLTLAFPALS
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH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HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA