| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fbp [H]
Identifier: 238024985
GI number: 238024985
Start: 2063661
End: 2064002
Strand: Direct
Name: fbp [H]
Synonym: bglu_2g16420
Alternate gene names: 238024985
Gene position: 2063661-2064002 (Clockwise)
Preceding gene: 238024978
Following gene: 238024986
Centisome position: 72.99
GC content: 67.54
Gene sequence:
>342_bases ATGACCGTCGTCACCACCGATTCGGGCCTCAAGTACGAAGAACTGACCGAAGGTACGGGCGCCGAAGCCAAGGCCGGCCA GTCCGTCACCGTCCACTACACGGGCTGGCTGACCGACGGCCAGAAGTTCGATTCGAGCAAGGATCGCAACGACCCGTTCG TGTTCGTGCTGGGCGGCGGCATGGTGATCAAGGGCTGGGACGAAGGGGTCCAGGGCATGAAGGTGGGCGGCACGCGCCGC CTGACGATCCCGGCCTCGCTCGGCTACGGCGCGCGCGGCGCGGGCGGCGTGATTCCGCCGAACGCCACGCTGGTGTTCGA GGTCGAGCTGCTGGCCGTCTGA
Upstream 100 bases:
>100_bases GTTGGCCGGCGCAGGCCGGGGCACGCGCGGCTGCCGGCCGCGACGCCCGGGCCCGGCTCCCCTACAATGGCGGTTTTCCG TTCAACTCAGGAGTTGCAGA
Downstream 100 bases:
>100_bases GCACGGCGGGCCCCACCAGCCCGGCGCCGCCCGCCGCCTTTCGCAAGCCCCCCTTCCCCCTCACGACGATGCTCGCGCCC CCCGCCGCCGGCCCGTCCGT
Product: peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTVVTTDSGLKYEELTEGTGAEAKAGQSVTVHYTGWLTDGQKFDSSKDRNDPFVFVLGGGMVIKGWDEGVQGMKVGGTRR LTIPASLGYGARGAGGVIPPNATLVFEVELLAV
Sequences:
>Translated_113_residues MTVVTTDSGLKYEELTEGTGAEAKAGQSVTVHYTGWLTDGQKFDSSKDRNDPFVFVLGGGMVIKGWDEGVQGMKVGGTRR LTIPASLGYGARGAGGVIPPNATLVFEVELLAV >Mature_112_residues TVVTTDSGLKYEELTEGTGAEAKAGQSVTVHYTGWLTDGQKFDSSKDRNDPFVFVLGGGMVIKGWDEGVQGMKVGGTRRL TIPASLGYGARGAGGVIPPNATLVFEVELLAV
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=106, Percent_Identity=54.7169811320755, Blast_Score=115, Evalue=5e-27, Organism=Homo sapiens, GI4503725, Length=106, Percent_Identity=54.7169811320755, Blast_Score=115, Evalue=5e-27, Organism=Homo sapiens, GI4758380, Length=106, Percent_Identity=50.9433962264151, Blast_Score=108, Evalue=8e-25, Organism=Homo sapiens, GI206725530, Length=92, Percent_Identity=57.6086956521739, Blast_Score=107, Evalue=2e-24, Organism=Homo sapiens, GI17149844, Length=92, Percent_Identity=57.6086956521739, Blast_Score=107, Evalue=2e-24, Organism=Homo sapiens, GI17149842, Length=92, Percent_Identity=57.6086956521739, Blast_Score=107, Evalue=2e-24, Organism=Homo sapiens, GI4503729, Length=96, Percent_Identity=57.2916666666667, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI224809331, Length=95, Percent_Identity=53.6842105263158, Blast_Score=97, Evalue=4e-21, Organism=Homo sapiens, GI224809329, Length=95, Percent_Identity=53.6842105263158, Blast_Score=93, Evalue=4e-20, Organism=Homo sapiens, GI224809327, Length=95, Percent_Identity=53.6842105263158, Blast_Score=93, Evalue=4e-20, Organism=Homo sapiens, GI4758384, Length=95, Percent_Identity=53.6842105263158, Blast_Score=93, Evalue=4e-20, Organism=Homo sapiens, GI192448443, Length=100, Percent_Identity=47, Blast_Score=92, Evalue=6e-20, Organism=Homo sapiens, GI206725547, Length=100, Percent_Identity=46, Blast_Score=86, Evalue=9e-18, Organism=Homo sapiens, GI33469985, Length=91, Percent_Identity=45.0549450549451, Blast_Score=84, Evalue=2e-17, Organism=Homo sapiens, GI31317231, Length=101, Percent_Identity=46.5346534653465, Blast_Score=83, Evalue=5e-17, Organism=Homo sapiens, GI8923659, Length=95, Percent_Identity=45.2631578947368, Blast_Score=83, Evalue=6e-17, Organism=Homo sapiens, GI7706131, Length=100, Percent_Identity=40, Blast_Score=76, Evalue=5e-15, Organism=Homo sapiens, GI150010552, Length=106, Percent_Identity=39.622641509434, Blast_Score=76, Evalue=7e-15, Organism=Homo sapiens, GI4503727, Length=98, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=5e-13, Organism=Homo sapiens, GI17149839, Length=62, Percent_Identity=51.6129032258064, Blast_Score=67, Evalue=2e-12, Organism=Homo sapiens, GI206725544, Length=112, Percent_Identity=33.0357142857143, Blast_Score=64, Evalue=2e-11, Organism=Homo sapiens, GI146229346, Length=112, Percent_Identity=33.0357142857143, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082390, Length=111, Percent_Identity=50.4504504504504, Blast_Score=100, Evalue=3e-23, Organism=Escherichia coli, GI1789745, Length=111, Percent_Identity=47.7477477477478, Blast_Score=86, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71993519, Length=106, Percent_Identity=55.6603773584906, Blast_Score=109, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17540882, Length=97, Percent_Identity=51.5463917525773, Blast_Score=104, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17561782, Length=86, Percent_Identity=54.6511627906977, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17561778, Length=94, Percent_Identity=43.6170212765958, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17506169, Length=109, Percent_Identity=38.5321100917431, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17506167, Length=109, Percent_Identity=38.5321100917431, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71993555, Length=82, Percent_Identity=46.3414634146341, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17561780, Length=108, Percent_Identity=37.037037037037, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324194, Length=105, Percent_Identity=55.2380952380952, Blast_Score=112, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320727, Length=99, Percent_Identity=56.5656565656566, Blast_Score=104, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323482, Length=105, Percent_Identity=46.6666666666667, Blast_Score=89, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323566, Length=105, Percent_Identity=46.6666666666667, Blast_Score=87, Evalue=4e-19, Organism=Drosophila melanogaster, GI281363946, Length=98, Percent_Identity=59.1836734693878, Blast_Score=122, Evalue=3e-29, Organism=Drosophila melanogaster, GI17352457, Length=98, Percent_Identity=59.1836734693878, Blast_Score=122, Evalue=3e-29, Organism=Drosophila melanogaster, GI24655568, Length=106, Percent_Identity=54.7169811320755, Blast_Score=114, Evalue=9e-27, Organism=Drosophila melanogaster, GI24647110, Length=109, Percent_Identity=54.1284403669725, Blast_Score=106, Evalue=3e-24, Organism=Drosophila melanogaster, GI24583150, Length=110, Percent_Identity=50, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI21356629, Length=98, Percent_Identity=57.1428571428571, Blast_Score=92, Evalue=9e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 11836; Mature: 11704
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVTTDSGLKYEELTEGTGAEAKAGQSVTVHYTGWLTDGQKFDSSKDRNDPFVFVLGGG CEEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC MVIKGWDEGVQGMKVGGTRRLTIPASLGYGARGAGGVIPPNATLVFEVELLAV EEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure TVVTTDSGLKYEELTEGTGAEAKAGQSVTVHYTGWLTDGQKFDSSKDRNDPFVFVLGGG EEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC MVIKGWDEGVQGMKVGGTRRLTIPASLGYGARGAGGVIPPNATLVFEVELLAV EEEECCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]