| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024981
Identifier: 238024981
GI number: 238024981
Start: 2059951
End: 2060373
Strand: Reverse
Name: 238024981
Synonym: bglu_2g16380
Alternate gene names: NA
Gene position: 2060373-2059951 (Counterclockwise)
Preceding gene: 238024982
Following gene: 238024980
Centisome position: 72.87
GC content: 71.63
Gene sequence:
>423_bases ATGTCTCGACCCGCACCGACCCCGCAACCGCCCGCCCCGCAGCCGGAAGCGACGCCCGCGCAGATGTCCGCCGCCGGCCT GCGCGCGTTCTTCAACATTGCGCGCGACTGGAATCTGTCGACCGACGAGCAGATCGTGCTGCTGGGCTCGCCGGGCCGCT CGACGTTCTTCAAATGGAAGGCCTCGCCGCAGACGGCGCGGCTCACGCGCGACACGCTGGAGCGGCTGTCGCTCGTGCTC GGCATCTACAAGGCGCTGCAGATCCTGCTGCCGCCCGAGGCCGCGGACGGCTGGGTCAAGCGGCCGAACCAGGCCGCGCC GTTCAACGGCAGCCGCGCGCTCGACCGCATGCTGGCCGGCAACGTCGGCGATCTGCTCGCGGTGCGGCAGTATCTGGATG CGGTGCGGGGGGGCTGGGCGTGA
Upstream 100 bases:
>100_bases TGTTACGCAGCCGCACGCATCGATCCACCGGCATCGGACCCTTGCAATCATCCGAAATTGGACTAATCTTGTTAGTCAAT TCACTTTGAGACTAACAGCC
Downstream 100 bases:
>100_bases CCGCAACCGATTGCTCGACCCGCTGGCCCGTCTCGCGGCTCGACTGGGCGCCCGCCTACCGTGTGATTCCCACCCGCTTT CCCGCCATCAACCTGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSRPAPTPQPPAPQPEATPAQMSAAGLRAFFNIARDWNLSTDEQIVLLGSPGRSTFFKWKASPQTARLTRDTLERLSLVL GIYKALQILLPPEAADGWVKRPNQAAPFNGSRALDRMLAGNVGDLLAVRQYLDAVRGGWA
Sequences:
>Translated_140_residues MSRPAPTPQPPAPQPEATPAQMSAAGLRAFFNIARDWNLSTDEQIVLLGSPGRSTFFKWKASPQTARLTRDTLERLSLVL GIYKALQILLPPEAADGWVKRPNQAAPFNGSRALDRMLAGNVGDLLAVRQYLDAVRGGWA >Mature_139_residues SRPAPTPQPPAPQPEATPAQMSAAGLRAFFNIARDWNLSTDEQIVLLGSPGRSTFFKWKASPQTARLTRDTLERLSLVLG IYKALQILLPPEAADGWVKRPNQAAPFNGSRALDRMLAGNVGDLLAVRQYLDAVRGGWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15251; Mature: 15119
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAPTPQPPAPQPEATPAQMSAAGLRAFFNIARDWNLSTDEQIVLLGSPGRSTFFKWK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEC ASPQTARLTRDTLERLSLVLGIYKALQILLPPEAADGWVKRPNQAAPFNGSRALDRMLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCC NVGDLLAVRQYLDAVRGGWA CHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRPAPTPQPPAPQPEATPAQMSAAGLRAFFNIARDWNLSTDEQIVLLGSPGRSTFFKWK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEC ASPQTARLTRDTLERLSLVLGIYKALQILLPPEAADGWVKRPNQAAPFNGSRALDRMLAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCC NVGDLLAVRQYLDAVRGGWA CHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]