| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024979
Identifier: 238024979
GI number: 238024979
Start: 2058559
End: 2059215
Strand: Reverse
Name: 238024979
Synonym: bglu_2g16360
Alternate gene names: NA
Gene position: 2059215-2058559 (Counterclockwise)
Preceding gene: 238024980
Following gene: 238024977
Centisome position: 72.83
GC content: 67.12
Gene sequence:
>657_bases ATGAAGACTCTCCCGATGTTGCTGCGCAATCGCCCGCGGATGTGGATCGCGTTCGCGATCGGCGTGGTGTTTGCCTGCGC GGTGCCGGGCCTGCATCATGCGTTCTCGCGCGCGCTGGTGGGCTGGGACGTCGCGGTGTGGCTGTATCTGGCGATGATGT GGCTGCGGATGTCGCGCGCGCATTACGACAAGGTGCGCGAAATCGCGGTGCGCGAGGACGAGAGCGCGACCACGGTGCTG ACCGTCGTCTGCCTCGCGACGGTGGCGAGCGTGGCGGCGATCGCCGTCGAGCTGGCGAGCGCGAAGAGCCTCGGGCTGCG CGCGGGCCTCGAGCATTACGCGGTGACGGGCGCGACGCTGTTCGGCGCGTGGTTCCTGATTCCCACCATCTTCACGCTGC ATTACGCGCGGCTCTACTACCAGTCGCCGCCGGCGGCGCGCGCGCTGCAGTTTCCCGATCGCGATCTCACGCCCGATTAC TGGGACTTCCTCTATTTCTCGTTCACGATCGCGGTGGCCTCGCAGACCTCGGACGTGACGCTGAACAGCCGCGCGATCCG GCGCGCCGGGCTCGCGCAGTCGATTCTGTCGTTCTACTTCAACATGGCGGTGCTCGGCCTGTCGATCAACGTCGCGGCAG GGCTGCTCGGCAGCTAG
Upstream 100 bases:
>100_bases CTCGAATACAGCTGGAACGGCACGGCGATCGACGCCGTGTTCGAACTGAACCAGATCGGCTGACCGGGCCGGCGCGGTTC TCTCACTTTCGGAGCACTCG
Downstream 100 bases:
>100_bases CGGCGGCTGCACGCGGGCGGCCTGCCGCGCCGGCCGTTCGCCGTCTCAGCGCACCATGTCGTAGGGACCGCCGCGCGCCA GCGCACGGTGGTAGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKTLPMLLRNRPRMWIAFAIGVVFACAVPGLHHAFSRALVGWDVAVWLYLAMMWLRMSRAHYDKVREIAVREDESATTVL TVVCLATVASVAAIAVELASAKSLGLRAGLEHYAVTGATLFGAWFLIPTIFTLHYARLYYQSPPAARALQFPDRDLTPDY WDFLYFSFTIAVASQTSDVTLNSRAIRRAGLAQSILSFYFNMAVLGLSINVAAGLLGS
Sequences:
>Translated_218_residues MKTLPMLLRNRPRMWIAFAIGVVFACAVPGLHHAFSRALVGWDVAVWLYLAMMWLRMSRAHYDKVREIAVREDESATTVL TVVCLATVASVAAIAVELASAKSLGLRAGLEHYAVTGATLFGAWFLIPTIFTLHYARLYYQSPPAARALQFPDRDLTPDY WDFLYFSFTIAVASQTSDVTLNSRAIRRAGLAQSILSFYFNMAVLGLSINVAAGLLGS >Mature_218_residues MKTLPMLLRNRPRMWIAFAIGVVFACAVPGLHHAFSRALVGWDVAVWLYLAMMWLRMSRAHYDKVREIAVREDESATTVL TVVCLATVASVAAIAVELASAKSLGLRAGLEHYAVTGATLFGAWFLIPTIFTLHYARLYYQSPPAARALQFPDRDLTPDY WDFLYFSFTIAVASQTSDVTLNSRAIRRAGLAQSILSFYFNMAVLGLSINVAAGLLGS
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24068; Mature: 24068
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLPMLLRNRPRMWIAFAIGVVFACAVPGLHHAFSRALVGWDVAVWLYLAMMWLRMSRA CCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYDKVREIAVREDESATTVLTVVCLATVASVAAIAVELASAKSLGLRAGLEHYAVTGATL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGAWFLIPTIFTLHYARLYYQSPPAARALQFPDRDLTPDYWDFLYFSFTIAVASQTSDVT HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE LNSRAIRRAGLAQSILSFYFNMAVLGLSINVAAGLLGS ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTLPMLLRNRPRMWIAFAIGVVFACAVPGLHHAFSRALVGWDVAVWLYLAMMWLRMSRA CCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYDKVREIAVREDESATTVLTVVCLATVASVAAIAVELASAKSLGLRAGLEHYAVTGATL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGAWFLIPTIFTLHYARLYYQSPPAARALQFPDRDLTPDYWDFLYFSFTIAVASQTSDVT HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE LNSRAIRRAGLAQSILSFYFNMAVLGLSINVAAGLLGS ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA