| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024972
Identifier: 238024972
GI number: 238024972
Start: 2051779
End: 2052684
Strand: Reverse
Name: 238024972
Synonym: bglu_2g16290
Alternate gene names: NA
Gene position: 2052684-2051779 (Counterclockwise)
Preceding gene: 238024975
Following gene: 238024968
Centisome position: 72.6
GC content: 72.63
Gene sequence:
>906_bases ATGAAGATCTTCATCACGGGAGCGGGCGGGTTCATCGGCGGCTCGATCGCGGCGCGGCTTGCCGCCGACGGGCATCAGGT GGCCGGCCTGGTGCGGCGCGAGGCGCAGGGCGAGGAACTGCGCGCGATCGGCGTCGAGCCGCGCCTCGGCTCGCTCGACG ATCGCGCGCTGCTGGTGCGCGAGGCGCGGGCGGCCGATGCCGTGATCAACGCGGCCGACAGCGACCATCGCGGCGCGGTC GAGGCGTTGATCGAGGGCCTGCGCGATTCCGGCAAGGTGCTGCTGCATACGAGCGGATCGAGCATCGTCGGCGACGCCGC CGGCGGCGAGGCCGGCGGGCAGATCCACCACGAGGACGCGCTGCCCGAGCCGAGCGCCGACAAGGCGCCGCGCGTGGCGA TCGACCGGCTCGTGCTGGCCGCCGCGCAGGCGGGGATTCGTCCCGCCGTGCTCTGCAACACGCTGATCTACGGCCACGGC CGCGGCCTGCCGCGCGAGAGCGTGCAACTGCCGCGGCTGGTGCGGCAGGCGCGAAAGAGCGGCGTGGTGCGCCATGTCGG CCCGGGCCGCAACATCTGGTCGAACGTCCATATCGACGACGTGGTCGAGGTCTATCGGCTCGCGCTCGAACGCACGCCGG CCGAGGGCAGGTTCTACTTCATCGAGAACGGCGAGGCCGCGTTCCGCGACATGTCGGCCGCGATCGCGACCGCGATGGGG CTCGGCGCGCCCGAGGACTGGCCGCTCGCGCAAGCGGAGGCGGAATGGGGCTACGAAATGGCGAACTACGGGCTGGGCTC GAACAGCCGCGTGCGCGGCGAGCGCGCCCGGCGCCTGCTGGGCTGGCAACCGAAGCACGCCTCGGTGATCGACTGGATCA CGGGCGAGATGATGCGCGGCGCCTGA
Upstream 100 bases:
>100_bases TGACCCGGATTCAAGAATGACTTGAGCCTAACACGGTTTTTACGCGTTCCGTCCGCCCTCACACTGGCAGCCATCGAACC AATCGGACCAGGAGTCCAGC
Downstream 100 bases:
>100_bases GCGAGCGGCGGCGGGCCGCGCCGCGAACCAACCAGGACCAGGGTGGGTGGCGGCCGCGCTGCCGCCGCGCCTACTCGTCG GCTTCCTTGAACGCCTTCGG
Product: putative NAD dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase; Polysaccharide Synthesis Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; Epimerase/Dehydratase; UDP-Glucose 4-Epimerase; Signal Peptide; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; Male Sterility Protein-Like Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKIFITGAGGFIGGSIAARLAADGHQVAGLVRREAQGEELRAIGVEPRLGSLDDRALLVREARAADAVINAADSDHRGAV EALIEGLRDSGKVLLHTSGSSIVGDAAGGEAGGQIHHEDALPEPSADKAPRVAIDRLVLAAAQAGIRPAVLCNTLIYGHG RGLPRESVQLPRLVRQARKSGVVRHVGPGRNIWSNVHIDDVVEVYRLALERTPAEGRFYFIENGEAAFRDMSAAIATAMG LGAPEDWPLAQAEAEWGYEMANYGLGSNSRVRGERARRLLGWQPKHASVIDWITGEMMRGA
Sequences:
>Translated_301_residues MKIFITGAGGFIGGSIAARLAADGHQVAGLVRREAQGEELRAIGVEPRLGSLDDRALLVREARAADAVINAADSDHRGAV EALIEGLRDSGKVLLHTSGSSIVGDAAGGEAGGQIHHEDALPEPSADKAPRVAIDRLVLAAAQAGIRPAVLCNTLIYGHG RGLPRESVQLPRLVRQARKSGVVRHVGPGRNIWSNVHIDDVVEVYRLALERTPAEGRFYFIENGEAAFRDMSAAIATAMG LGAPEDWPLAQAEAEWGYEMANYGLGSNSRVRGERARRLLGWQPKHASVIDWITGEMMRGA >Mature_301_residues MKIFITGAGGFIGGSIAARLAADGHQVAGLVRREAQGEELRAIGVEPRLGSLDDRALLVREARAADAVINAADSDHRGAV EALIEGLRDSGKVLLHTSGSSIVGDAAGGEAGGQIHHEDALPEPSADKAPRVAIDRLVLAAAQAGIRPAVLCNTLIYGHG RGLPRESVQLPRLVRQARKSGVVRHVGPGRNIWSNVHIDDVVEVYRLALERTPAEGRFYFIENGEAAFRDMSAAIATAMG LGAPEDWPLAQAEAEWGYEMANYGLGSNSRVRGERARRLLGWQPKHASVIDWITGEMMRGA
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=308, Percent_Identity=26.9480519480519, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32077; Mature: 32077
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFITGAGGFIGGSIAARLAADGHQVAGLVRREAQGEELRAIGVEPRLGSLDDRALLVR CEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH EARAADAVINAADSDHRGAVEALIEGLRDSGKVLLHTSGSSIVGDAAGGEAGGQIHHEDA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCEEECCCC LPEPSADKAPRVAIDRLVLAAAQAGIRPAVLCNTLIYGHGRGLPRESVQLPRLVRQARKS CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC GVVRHVGPGRNIWSNVHIDDVVEVYRLALERTPAEGRFYFIENGEAAFRDMSAAIATAMG CCEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHC LGAPEDWPLAQAEAEWGYEMANYGLGSNSRVRGERARRLLGWQPKHASVIDWITGEMMRG CCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC A C >Mature Secondary Structure MKIFITGAGGFIGGSIAARLAADGHQVAGLVRREAQGEELRAIGVEPRLGSLDDRALLVR CEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHH EARAADAVINAADSDHRGAVEALIEGLRDSGKVLLHTSGSSIVGDAAGGEAGGQIHHEDA HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCCEEECCCC LPEPSADKAPRVAIDRLVLAAAQAGIRPAVLCNTLIYGHGRGLPRESVQLPRLVRQARKS CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC GVVRHVGPGRNIWSNVHIDDVVEVYRLALERTPAEGRFYFIENGEAAFRDMSAAIATAMG CCEEECCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHC LGAPEDWPLAQAEAEWGYEMANYGLGSNSRVRGERARRLLGWQPKHASVIDWITGEMMRG CCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA