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The map label for this gene is yccS [H]

Identifier: 238024948

GI number: 238024948

Start: 2025575

End: 2027725

Strand: Reverse

Name: yccS [H]

Synonym: bglu_2g16030

Alternate gene names: 238024948

Gene position: 2027725-2025575 (Counterclockwise)

Preceding gene: 238024952

Following gene: 238024946

Centisome position: 71.72

GC content: 71.87

Gene sequence:

>2151_bases
ATGCTTCGCCATCTACTCCATCGCATCAGGCACGTCGCCACGGCTCGCCTGAGGACGCTCAATGTGCTCGCGGGCGCCTG
GTCGCGCCGCCGGCCCTTGTGGATGGTGTCGTTCTCGATCAATGACGCGAGCCTGTCGGAAGGACTGCGCGCCGCCTGTG
CTTCGACGGCGATGCTGGTGGCCGGCAACCTGCTGCACGAGCCCGGGTTCGCCTGGGCCGCGATCGGCGCGTTCTGGACC
TGCCTGGCCGACGCGGCGGGCTCGAACCGCACACGCTTCGCGTCGATGGCGAGTTTCGCGGTGCTGTCCGCGCTCTGCGG
CGGCATCACCGCGTTTGCCTCCGGCATCGGCACCGCCGCCGCGCTGCTCGCGGTGCTGGTGTTCACCTCGCTCGGCGCGC
TGGGACGGATCTGGGGCGCGGCCACCGCACAGGTTGCGATCCTGGCCGCGACCGCCTGCGTGGTGATGGCCGACCGGCCG
ATGCACGACTGGCACAACGGGCTCGCCTTCCTCGGCGTCTATTTGCTCGGCTGCGTGCTGGCGATCGTACTGAGCCTGAC
GGTCTGGCGCATCCATCCGTTCGCGCAGAGCCGTGCCGCGGTGCGCGGCGTCTACGTGCGGCTCGCCGACATCGCGCGCG
ACGCCTCGCGCCTGCTGACGGACGCGCAGCAGACGCAGCGGGCCTGGGAAATACACGCCGCGAAATACCGCTCCGACGCG
CGCTCGGCGCTCGAGGCGGCGCGTCGCACGCTGGCCCGCATGCCGGTGGCGAAGACGGACCGGCGCGAGTCGTATGCGAA
CCTGCTGATCGCGGTGGCCGACGGCGAGCGCTGGTTTGCGCATCTGATCGCGGTGGCGGGCGTCTGCCAGCGGGGCCGCC
AGACGCTGCGCGATCCGCGGCGTGCCGCGCGCGTGCTGGCCGGCATCGCCGAACTGCTGCATCGCACCGGCGACGCGATC
GACGAGGCGCCGTGGGAGCGGCCCGACGCGTTGCAGCGCCGGCTGCGCCGCTTCGCGCGCGGGCTCGACGCGGCGCTCGG
CGAATCGATGACGATGGCCTTGCAGCTGGGACCCGATCCGTCCGATCTCGCGCCGTCGCCGCGCCGGCAGGTGTCGTGGA
CGCGCAGCCTGCGCCTGGTGCTCGCGCGCGCCTGGGCGACGCTGCACGCGAACCTGTCATGGAAGTCGATCGGGCTGCGG
CACGCGGCGCGCGTCGCGGTGGCCACCACGCTCGGCTTTCTGGTGGTGCGGCTGCTCGGCGTGCCGTTCGGCTACTGGAC
CACGATGGCGACGCTGCTGATCCTGCAGCCGTCGATCGCCGGCACCTGGCCGCGCAGTGTCGAGCGTGCCGCCGGCAGCA
TCGTCGGCGGCCTGCTGGCGGCTGCGATCGGGCTCGCCGTGCATTCGCCGATCGGCATCTCGCTGGTGGTGTTTCCGCTG
GTCTGCGCGACCATGGCGCTACGGCCCGTCAGCTATAGTCTGTTCGTGCTGTTCCTCACGCCCACCTTCGTGCTGGTGGC
CGACTTCGCGATGCCGGCCGCGAGCGAGCTGTCCTATGCGCTGACGCGGCTCGGCAACAACGTGCTCGGCTGCGTGATCG
CGCTGGTCGCGACCTTCATGCTGTGGCCCACGCGCGAGCAGATCGACATTCGCGGCCAACTGGCCGCTGCGATCGCGGCG
AACCTGCGCTATCTGGTCGACGCGATCGAGGCACCGGGCCGTGCGAGCCGCGAGGCCGAGCGCCTGCGCCGCGAGGCGGG
GCTGGCCAGCAACAACGCGGAGGAGGCCTTCAACCGGATTCGGCTCGAACGGCTCGACGACACTCGTTTCGACACGGCCG
CCTCGACGGTGCTGGGGCTGCTGCGCCGGATGGCCGGTACCGCCGCATACTTGCGCGCCAGCGTGCACGGGCCGCGCATG
GAGATCGATCTGGTCGAATGGGTGGCCGCCGCGAGCGACGATATCGACACGATGCTCGCCACCGGCCGCGTGCCGCCGTG
CCGTCCGCTGCCGCCGCGCGAGAAGCTCGCGCAGCTCGAGATGGACGCGGTCGGGCAGATCGCGCTGCTGCAGCGCCTGA
TCGGCGATCTGCAATTGGACGACGGGCCGCTCGCGCGGCGCGGCGTGGCGCCGGCGCGCCGCGTGGGCTGA

Upstream 100 bases:

>100_bases
CCTTATCATCGACCCGGGGCGTCGACTGCGGTGCAAGAACGCGCACCGCGCCCCCACCGGTGTTCATCCGCCCCTCATCC
GTTTCCTCATCGAATTCGCA

Downstream 100 bases:

>100_bases
GACCGTCCGCGGCGCGGCAAGCCGGGCGCCGTCCCAGCTGGCTGCGGTACGCCTGCCGTCAGGCCTGTCGCAGTACGAAG
CAGTTCGGCTGCCCGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MLRHLLHRIRHVATARLRTLNVLAGAWSRRRPLWMVSFSINDASLSEGLRAACASTAMLVAGNLLHEPGFAWAAIGAFWT
CLADAAGSNRTRFASMASFAVLSALCGGITAFASGIGTAAALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADRP
MHDWHNGLAFLGVYLLGCVLAIVLSLTVWRIHPFAQSRAAVRGVYVRLADIARDASRLLTDAQQTQRAWEIHAAKYRSDA
RSALEAARRTLARMPVAKTDRRESYANLLIAVADGERWFAHLIAVAGVCQRGRQTLRDPRRAARVLAGIAELLHRTGDAI
DEAPWERPDALQRRLRRFARGLDAALGESMTMALQLGPDPSDLAPSPRRQVSWTRSLRLVLARAWATLHANLSWKSIGLR
HAARVAVATTLGFLVVRLLGVPFGYWTTMATLLILQPSIAGTWPRSVERAAGSIVGGLLAAAIGLAVHSPIGISLVVFPL
VCATMALRPVSYSLFVLFLTPTFVLVADFAMPAASELSYALTRLGNNVLGCVIALVATFMLWPTREQIDIRGQLAAAIAA
NLRYLVDAIEAPGRASREAERLRREAGLASNNAEEAFNRIRLERLDDTRFDTAASTVLGLLRRMAGTAAYLRASVHGPRM
EIDLVEWVAAASDDIDTMLATGRVPPCRPLPPREKLAQLEMDAVGQIALLQRLIGDLQLDDGPLARRGVAPARRVG

Sequences:

>Translated_716_residues
MLRHLLHRIRHVATARLRTLNVLAGAWSRRRPLWMVSFSINDASLSEGLRAACASTAMLVAGNLLHEPGFAWAAIGAFWT
CLADAAGSNRTRFASMASFAVLSALCGGITAFASGIGTAAALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADRP
MHDWHNGLAFLGVYLLGCVLAIVLSLTVWRIHPFAQSRAAVRGVYVRLADIARDASRLLTDAQQTQRAWEIHAAKYRSDA
RSALEAARRTLARMPVAKTDRRESYANLLIAVADGERWFAHLIAVAGVCQRGRQTLRDPRRAARVLAGIAELLHRTGDAI
DEAPWERPDALQRRLRRFARGLDAALGESMTMALQLGPDPSDLAPSPRRQVSWTRSLRLVLARAWATLHANLSWKSIGLR
HAARVAVATTLGFLVVRLLGVPFGYWTTMATLLILQPSIAGTWPRSVERAAGSIVGGLLAAAIGLAVHSPIGISLVVFPL
VCATMALRPVSYSLFVLFLTPTFVLVADFAMPAASELSYALTRLGNNVLGCVIALVATFMLWPTREQIDIRGQLAAAIAA
NLRYLVDAIEAPGRASREAERLRREAGLASNNAEEAFNRIRLERLDDTRFDTAASTVLGLLRRMAGTAAYLRASVHGPRM
EIDLVEWVAAASDDIDTMLATGRVPPCRPLPPREKLAQLEMDAVGQIALLQRLIGDLQLDDGPLARRGVAPARRVG
>Mature_716_residues
MLRHLLHRIRHVATARLRTLNVLAGAWSRRRPLWMVSFSINDASLSEGLRAACASTAMLVAGNLLHEPGFAWAAIGAFWT
CLADAAGSNRTRFASMASFAVLSALCGGITAFASGIGTAAALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADRP
MHDWHNGLAFLGVYLLGCVLAIVLSLTVWRIHPFAQSRAAVRGVYVRLADIARDASRLLTDAQQTQRAWEIHAAKYRSDA
RSALEAARRTLARMPVAKTDRRESYANLLIAVADGERWFAHLIAVAGVCQRGRQTLRDPRRAARVLAGIAELLHRTGDAI
DEAPWERPDALQRRLRRFARGLDAALGESMTMALQLGPDPSDLAPSPRRQVSWTRSLRLVLARAWATLHANLSWKSIGLR
HAARVAVATTLGFLVVRLLGVPFGYWTTMATLLILQPSIAGTWPRSVERAAGSIVGGLLAAAIGLAVHSPIGISLVVFPL
VCATMALRPVSYSLFVLFLTPTFVLVADFAMPAASELSYALTRLGNNVLGCVIALVATFMLWPTREQIDIRGQLAAAIAA
NLRYLVDAIEAPGRASREAERLRREAGLASNNAEEAFNRIRLERLDDTRFDTAASTVLGLLRRMAGTAAYLRASVHGPRM
EIDLVEWVAAASDDIDTMLATGRVPPCRPLPPREKLAQLEMDAVGQIALLQRLIGDLQLDDGPLARRGVAPARRVG

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=209, Percent_Identity=28.2296650717703, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77359; Mature: 77359

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLLHRIRHVATARLRTLNVLAGAWSRRRPLWMVSFSINDASLSEGLRAACASTAMLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
AGNLLHEPGFAWAAIGAFWTCLADAAGSNRTRFASMASFAVLSALCGGITAFASGIGTAA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADRPMHDWHNGLAFLGVYLLGCVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIVLSLTVWRIHPFAQSRAAVRGVYVRLADIARDASRLLTDAQQTQRAWEIHAAKYRSDA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALEAARRTLARMPVAKTDRRESYANLLIAVADGERWFAHLIAVAGVCQRGRQTLRDPR
HHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHH
RAARVLAGIAELLHRTGDAIDEAPWERPDALQRRLRRFARGLDAALGESMTMALQLGPDP
HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
SDLAPSPRRQVSWTRSLRLVLARAWATLHANLSWKSIGLRHAARVAVATTLGFLVVRLLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPFGYWTTMATLLILQPSIAGTWPRSVERAAGSIVGGLLAAAIGLAVHSPIGISLVVFPL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VCATMALRPVSYSLFVLFLTPTFVLVADFAMPAASELSYALTRLGNNVLGCVIALVATFM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LWPTREQIDIRGQLAAAIAANLRYLVDAIEAPGRASREAERLRREAGLASNNAEEAFNRI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
RLERLDDTRFDTAASTVLGLLRRMAGTAAYLRASVHGPRMEIDLVEWVAAASDDIDTMLA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH
TGRVPPCRPLPPREKLAQLEMDAVGQIALLQRLIGDLQLDDGPLARRGVAPARRVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCC
>Mature Secondary Structure
MLRHLLHRIRHVATARLRTLNVLAGAWSRRRPLWMVSFSINDASLSEGLRAACASTAMLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
AGNLLHEPGFAWAAIGAFWTCLADAAGSNRTRFASMASFAVLSALCGGITAFASGIGTAA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLAVLVFTSLGALGRIWGAATAQVAILAATACVVMADRPMHDWHNGLAFLGVYLLGCVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIVLSLTVWRIHPFAQSRAAVRGVYVRLADIARDASRLLTDAQQTQRAWEIHAAKYRSDA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALEAARRTLARMPVAKTDRRESYANLLIAVADGERWFAHLIAVAGVCQRGRQTLRDPR
HHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHH
RAARVLAGIAELLHRTGDAIDEAPWERPDALQRRLRRFARGLDAALGESMTMALQLGPDP
HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
SDLAPSPRRQVSWTRSLRLVLARAWATLHANLSWKSIGLRHAARVAVATTLGFLVVRLLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPFGYWTTMATLLILQPSIAGTWPRSVERAAGSIVGGLLAAAIGLAVHSPIGISLVVFPL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VCATMALRPVSYSLFVLFLTPTFVLVADFAMPAASELSYALTRLGNNVLGCVIALVATFM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LWPTREQIDIRGQLAAAIAANLRYLVDAIEAPGRASREAERLRREAGLASNNAEEAFNRI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
RLERLDDTRFDTAASTVLGLLRRMAGTAAYLRASVHGPRMEIDLVEWVAAASDDIDTMLA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH
TGRVPPCRPLPPREKLAQLEMDAVGQIALLQRLIGDLQLDDGPLARRGVAPARRVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]