| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yqeY [H]
Identifier: 238024934
GI number: 238024934
Start: 2009180
End: 2009626
Strand: Reverse
Name: yqeY [H]
Synonym: bglu_2g15890
Alternate gene names: 238024934
Gene position: 2009626-2009180 (Counterclockwise)
Preceding gene: 238024935
Following gene: 238024933
Centisome position: 71.08
GC content: 67.56
Gene sequence:
>447_bases ATGAGTTTGAAAGATCAGATCAGCGAAGACATGAAGACCGCCATGCGCGCCAAGGACACCCTGCGGCTCGGCACGATCCG GTTGCTGCTGTCCGCGATCAAGCAGCGCGAGGTCGACGAGCGCGTCACGCTCGACGACGCCGGCGTGACGACGATCGTCG AGCGGATGCTGAAGCAGCGCAAGGATTCGATCTCGCAGTTCCAGGCGGCCGGCCGCGACGACCTGGTCGCGCAGGAGCAG GCGGAAATGGCGGTGCTGATTGCCTACCTGCCGGCGCAATTGTCCGATGCCGAGGTGGCCGACGCCGTGCAGGAGGTGGT GGTCGCGCTCGGCGCGTCCGGCCCGCAGGATCTGGGCCGCGTGATGGCCGCGCTCAAGACCCGGCTGGCCGGCAAGGCCG ACATGACGGCGGTGGCTGCGCTCGCCAAGGCGGCGCTCGTCAAGTAA
Upstream 100 bases:
>100_bases CCGGATTCGAGCAAACCCGCTTGAGACACTCTCAAGCGGGTTTTTGTGTTGAGGTCCGGCATTCCGGCATTCGATGTTTT TTCCTCACCCGGGTAAAGCC
Downstream 100 bases:
>100_bases GCGAAGGCGGGCACGCACGCCGTGCCCGCCGCGTTCGACCCAGGCCGCCGTCGTGATCCCGCATTCGTTTCTTCAGGACC TGCTCAACCGCGTCGATATC
Product: GatB/Yqey domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSLKDQISEDMKTAMRAKDTLRLGTIRLLLSAIKQREVDERVTLDDAGVTTIVERMLKQRKDSISQFQAAGRDDLVAQEQ AEMAVLIAYLPAQLSDAEVADAVQEVVVALGASGPQDLGRVMAALKTRLAGKADMTAVAALAKAALVK
Sequences:
>Translated_148_residues MSLKDQISEDMKTAMRAKDTLRLGTIRLLLSAIKQREVDERVTLDDAGVTTIVERMLKQRKDSISQFQAAGRDDLVAQEQ AEMAVLIAYLPAQLSDAEVADAVQEVVVALGASGPQDLGRVMAALKTRLAGKADMTAVAALAKAALVK >Mature_147_residues SLKDQISEDMKTAMRAKDTLRLGTIRLLLSAIKQREVDERVTLDDAGVTTIVERMLKQRKDSISQFQAAGRDDLVAQEQA EMAVLIAYLPAQLSDAEVADAVQEVVVALGASGPQDLGRVMAALKTRLAGKADMTAVAALAKAALVK
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324789, Length=82, Percent_Identity=42.6829268292683, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 15865; Mature: 15733
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKDQISEDMKTAMRAKDTLRLGTIRLLLSAIKQREVDERVTLDDAGVTTIVERMLKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KDSISQFQAAGRDDLVAQEQAEMAVLIAYLPAQLSDAEVADAVQEVVVALGASGPQDLGR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH VMAALKTRLAGKADMTAVAALAKAALVK HHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SLKDQISEDMKTAMRAKDTLRLGTIRLLLSAIKQREVDERVTLDDAGVTTIVERMLKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KDSISQFQAAGRDDLVAQEQAEMAVLIAYLPAQLSDAEVADAVQEVVVALGASGPQDLGR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH VMAALKTRLAGKADMTAVAALAKAALVK HHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]