Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024931

Identifier: 238024931

GI number: 238024931

Start: 2002971

End: 2004269

Strand: Direct

Name: 238024931

Synonym: bglu_2g15850

Alternate gene names: NA

Gene position: 2002971-2004269 (Clockwise)

Preceding gene: 238024927

Following gene: 238024937

Centisome position: 70.84

GC content: 61.59

Gene sequence:

>1299_bases
ATGAGTTACACGATTTCAAATCCACGCTCGACACTGCACGCTCTCGAACCCATCGGCCTCGGCACGCCCGAGGTTGAAAG
CCTGCTCAGCTACTTCTGCCGGCTGGCCGTGTCGCATAGCGTGTCTGTGGCGGCGCTTTGCCGGCAAGTCGCCAAAACTG
TTGGCTGGGAGCTTTCAGAGAAGCACGAATGGCACGTGGGGAACATCGGCGGCATCGGGGAACCAGCAAGCAACTGGTCT
GCCGCGCTCTCAGCTCTTACGAGCGCCGAACGACTCGACAGACTCACACTGCTGCCATGGCGTGACGTTATTGCTCAAAC
CAGCCTGGCCGCGACGCGCTCACGTTGGTGTCCGGCATGCTTCGCAGAGGACCGGGACAGCGGCAAAACGCCTTATTTCC
GCCTGGCATGGGACGTGGGGGCAGTGAATGTATGCGCCAAGCACAAGGTCGATCTGGTGCACATCTGTCCGGATTGCGGA
CGCGCTGACGCGCGGCACAAGTCGGCCTACGTCGTCCCCGGCTGGTGCGCGCACTGCGGGGCTTTTCTCGGCGATGGAGA
GCCGCCTGCGCCTGCTTCTCCGGAGGAGCTCTGGAAGGCGACTCAGGTCGGGGCGATGCTGGAAGCTCAAGCGTCACTCG
AAGCGCCGCCTGCCCGCCAAGGAATGCTTGACGCGATACAAACGCTTGTTACCCAGGTCGACAACGGAAAGGGAGCAGTT
TTTGCGCGGCGTCTGGGCCTGAGCAAGACTACGGTGCATCACTGGTTGAAGGAAGGCGGCGCTCCTGCGTTAACAGCACA
TTTGCGCATCGCGTCACAGACCGGATTGCCGCTCCAGCGGTTGCTAACGGGCAATTTGGACGATTGGACTCCGTCCACGG
CAGAAATCCACCAGTTGGCGATGCTGTTCCCCGCTGAGACAAAACGGGCGACCGCCCGCTCAATCGACTGGGAGAAGGTT
CGCAGCGAATTGCACACGTTCAGCAGACTGCCGTCCATCATTAGCGTAGCGGAGGCAGCACGCCGCCTCGACGTCGATAC
CAGGCTGCTGTACCAGAATGCGAACAAGGAAGCGCGCGTCCTTGCCGAACGCTGGAGGCAATATATGCAGCGCCGGAAAG
AACAGAGCCTGGTCAATGCCCGCACCGTCATCGAGGCGGCATGCCGGGACATCATCGCCGACGGCAAGGCCATCAACCTG
CGGGAGCTTAATGCTCGAGTGCCCAAGGAGGTTCTGGGCAGCATCCGCGGCGTCATAGACGTGCTCCAGGAGGTCAAGGA
GGCGCTGGGCGTGAGCTAG

Upstream 100 bases:

>100_bases
TGGCCGAAATCCTCGACGGCGAGGAGGCCATCAATCCCGATCTCACCCGCATCATGCGTGGGCCGCAGCGTCAGGCATCA
GCTGGCAGAAGGAGTGCCGC

Downstream 100 bases:

>100_bases
GCACCCGCACCCCCTTCACAGCGAAAAAGCCGGCGCGCACGCCGGCTTTTTTACGCCCATTCGCGGCTGCACGCCGCGAA
CAAAGTTTTCACGCTACCAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSYTISNPRSTLHALEPIGLGTPEVESLLSYFCRLAVSHSVSVAALCRQVAKTVGWELSEKHEWHVGNIGGIGEPASNWS
AALSALTSAERLDRLTLLPWRDVIAQTSLAATRSRWCPACFAEDRDSGKTPYFRLAWDVGAVNVCAKHKVDLVHICPDCG
RADARHKSAYVVPGWCAHCGAFLGDGEPPAPASPEELWKATQVGAMLEAQASLEAPPARQGMLDAIQTLVTQVDNGKGAV
FARRLGLSKTTVHHWLKEGGAPALTAHLRIASQTGLPLQRLLTGNLDDWTPSTAEIHQLAMLFPAETKRATARSIDWEKV
RSELHTFSRLPSIISVAEAARRLDVDTRLLYQNANKEARVLAERWRQYMQRRKEQSLVNARTVIEAACRDIIADGKAINL
RELNARVPKEVLGSIRGVIDVLQEVKEALGVS

Sequences:

>Translated_432_residues
MSYTISNPRSTLHALEPIGLGTPEVESLLSYFCRLAVSHSVSVAALCRQVAKTVGWELSEKHEWHVGNIGGIGEPASNWS
AALSALTSAERLDRLTLLPWRDVIAQTSLAATRSRWCPACFAEDRDSGKTPYFRLAWDVGAVNVCAKHKVDLVHICPDCG
RADARHKSAYVVPGWCAHCGAFLGDGEPPAPASPEELWKATQVGAMLEAQASLEAPPARQGMLDAIQTLVTQVDNGKGAV
FARRLGLSKTTVHHWLKEGGAPALTAHLRIASQTGLPLQRLLTGNLDDWTPSTAEIHQLAMLFPAETKRATARSIDWEKV
RSELHTFSRLPSIISVAEAARRLDVDTRLLYQNANKEARVLAERWRQYMQRRKEQSLVNARTVIEAACRDIIADGKAINL
RELNARVPKEVLGSIRGVIDVLQEVKEALGVS
>Mature_431_residues
SYTISNPRSTLHALEPIGLGTPEVESLLSYFCRLAVSHSVSVAALCRQVAKTVGWELSEKHEWHVGNIGGIGEPASNWSA
ALSALTSAERLDRLTLLPWRDVIAQTSLAATRSRWCPACFAEDRDSGKTPYFRLAWDVGAVNVCAKHKVDLVHICPDCGR
ADARHKSAYVVPGWCAHCGAFLGDGEPPAPASPEELWKATQVGAMLEAQASLEAPPARQGMLDAIQTLVTQVDNGKGAVF
ARRLGLSKTTVHHWLKEGGAPALTAHLRIASQTGLPLQRLLTGNLDDWTPSTAEIHQLAMLFPAETKRATARSIDWEKVR
SELHTFSRLPSIISVAEAARRLDVDTRLLYQNANKEARVLAERWRQYMQRRKEQSLVNARTVIEAACRDIIADGKAINLR
ELNARVPKEVLGSIRGVIDVLQEVKEALGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47328; Mature: 47196

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTISNPRSTLHALEPIGLGTPEVESLLSYFCRLAVSHSVSVAALCRQVAKTVGWELSE
CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
KHEWHVGNIGGIGEPASNWSAALSALTSAERLDRLTLLPWRDVIAQTSLAATRSRWCPAC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
FAEDRDSGKTPYFRLAWDVGAVNVCAKHKVDLVHICPDCGRADARHKSAYVVPGWCAHCG
HHCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCHHHHHH
AFLGDGEPPAPASPEELWKATQVGAMLEAQASLEAPPARQGMLDAIQTLVTQVDNGKGAV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHH
FARRLGLSKTTVHHWLKEGGAPALTAHLRIASQTGLPLQRLLTGNLDDWTPSTAEIHQLA
HHHHHCCCHHHHHHHHHHCCCCEEEHHEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
MLFPAETKRATARSIDWEKVRSELHTFSRLPSIISVAEAARRLDVDTRLLYQNANKEARV
HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
LAERWRQYMQRRKEQSLVNARTVIEAACRDIIADGKAINLRELNARVPKEVLGSIRGVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHH
VLQEVKEALGVS
HHHHHHHHHCCC
>Mature Secondary Structure 
SYTISNPRSTLHALEPIGLGTPEVESLLSYFCRLAVSHSVSVAALCRQVAKTVGWELSE
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
KHEWHVGNIGGIGEPASNWSAALSALTSAERLDRLTLLPWRDVIAQTSLAATRSRWCPAC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
FAEDRDSGKTPYFRLAWDVGAVNVCAKHKVDLVHICPDCGRADARHKSAYVVPGWCAHCG
HHCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCHHHHHH
AFLGDGEPPAPASPEELWKATQVGAMLEAQASLEAPPARQGMLDAIQTLVTQVDNGKGAV
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHH
FARRLGLSKTTVHHWLKEGGAPALTAHLRIASQTGLPLQRLLTGNLDDWTPSTAEIHQLA
HHHHHCCCHHHHHHHHHHCCCCEEEHHEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
MLFPAETKRATARSIDWEKVRSELHTFSRLPSIISVAEAARRLDVDTRLLYQNANKEARV
HHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
LAERWRQYMQRRKEQSLVNARTVIEAACRDIIADGKAINLRELNARVPKEVLGSIRGVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHH
VLQEVKEALGVS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA