| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is treZ [H]
Identifier: 238024914
GI number: 238024914
Start: 1978014
End: 1980071
Strand: Direct
Name: treZ [H]
Synonym: bglu_2g15590
Alternate gene names: 238024914
Gene position: 1978014-1980071 (Clockwise)
Preceding gene: 238024913
Following gene: 238024915
Centisome position: 69.96
GC content: 73.86
Gene sequence:
>2058_bases ATGACCCAATCCCTGATTTCCGCTCCCGGCCGCCACGCGTATCCGACCTCGTTCGGCGCCACCTGCATCGATTTGCACCG CACCCACTTCCGCTTCTGGGCGCCTGCCTGCGAAGCGGTGAGCGTGGAGCTGGAGGACGGCGAACGCCGCGCCAGCGTGG CCATGACGGCGCGCGAGGGCGGCTGGTTCGACGCCACCGTGCCGTTCGGCCCCGGCACGCGCTACCGCTACCGGCTCGAC GGCGGCGAGGCCGTGCCCGATCCCGCCTCGCGCTTCCAGCCGGAGGGCGTCCACGGCCCGAGCCAGGTGGTCGATCCCTG CGCCTATCGCTGGCGCCAGGACGACTGGCGCGGCCGGCCCTGGCACGAGACCGTGCTCTACGAGCTGCACGTGGGCGCGC TCGGCGGCTATCGCGGCGTGACGCAGCGGCTCGGCGAACTCGCCGCGCTGGGCGTGACCGCGATCGAGCTGATGCCGCTC GCCGAATGTCCCGGCACGCGCAACTGGGGCTACGACGGCGTGCTGCCGTTCGCGCCGTCGTCGTCCTACGGGCGGCCCGA GGAACTGAAGGCGCTGGTGGATGCCGCGCACGAGTTGGGGCTGCAGGTATTCGTCGACGTGGTCTACAACCACTTCGGCC CCGACGGCAACTGGCTCGCGCGCTACGCGCCGTCGTTCTTCCGCGCAGGCAAGACCACCGGCTGGGGGCCGGCGATCGAC TTCCGTCGCGACGAGGTGGGCCGCTTCTTCATCGACAACGCGCTCTACTGGCTCGAGGAATACCGCATCGACGGGCTGCG CATCGACGCCGCGCACGCGATCGACGACGACCACTGGCTCGGCGAGCTGGCCGCGCTGGTGCGCGCCTATGCGGGCAGCG AGCGGCACGTCCATCTGGTGCTGGAAAACGAGCGCAACAGCGCGCACCTGCTGGCCGACGTCGGCTTCGACGCGCAGTGG AACGACGACTTCCACAACAGCGCCCACGTGCTGCTCACGGGCGAGCGCGACGGCTATTACCGGGCCTATGCGGACAAGCC GCTGCAGCACTTCGCGCGCACCCTGGCCGAAGGCTTCGCCTACCAGGGCGAGCCCTCGCCGCTGCACGACGGCCGCCCGC GCGGCGAGCCCAGCGCGCACCTGCCGCCCACCGCATTCGTCGCGTTCCTGCAGAACCACGACCAGATCGGCAACCGCGCG TTCGGCGAGCGGCTGCGCGCCCTCGTCAACGACGACGCGCTGCGCGCGGCCACCGCGCTGCTGCTGCTCGCGCCGCAGGT GCCGCTGCTGTTCATGGGCGAGGAAACCGGCTCGACGCAGCCGTTCCAGTTCTTCACCGATTACGAAGGCGAGCTGGCCG ACGCGGTGCGCGAGGGGCGCCGCCGCGAGTTCGCCGCGTTTCCGGCATTCGCCAATCCCGAGCGCCGCGACCTGATTCCC GACCCGAACGATCCGGCCACCTTCGCGCGCTCCTCGCCCGAAGCCGTCGAGGCCGACCGCGAGAGCGACGACGCCCGCAG CTGGCGGGCGTTCTATCGCGGCGCGCTGGCGGTGCGCAACGGCTTCCTCGTGCCGCATCTGCCCGGCACGCGCGCCGAGG GCGTCAGCCTGCTCGACGGCGGCGCCGGCACCGGCGCGGCCCACGACGATCCGCGCCACGGCAACCCCGGCGTCGCCCCC GACCGCTCGCGCCTGCTGCCGGACGACCCCGCGCAGCCGGCCGAGCGCGAGGCGGCCGCGACGCTCGCCGCCGCGATCGA GCGCGACCAGGCGGGCGGCGGCGCTCCGGGCCACCCGGCCAGCCACCACGCACCCGCCGGCCAGGCGCCGCGCGCGCTGA TCGCGTGCTGGCGGCTCGGCAACGGCGCGCGGCTCGCGATCGCGCTGAATCTCGACGACACGCCGGTCGCGCTGCCCGAC CCGCCGTCCGGCAAGATCGTGTTCGAGACCCCGCCGCGCGTGCGCGACGCGCTCGCCGACGGGCGGCTCGGCCCCCACGC CTGCCTCGCCTGGCTCGACGCGCCGGCCGGCACGCCGGCCGAGGGGCGCGGACGATGA
Upstream 100 bases:
>100_bases GGGAGCCCGAACCCGAGCCGACCGCCGGCCCCGCGCCGGCCCATGACGAACCCACGCCGGTGTCCTGAGCACGACACCGG CCCGCCTCCGAGACATCGCG
Downstream 100 bases:
>100_bases GCACCGGCCAGCACACCTCGCTCGCCGCGCTGGCCCGCGCCGCCGGGCTCGAACCCGAATGGACCGATGCGGCCGACCAG CCGCGGCGGGTCGGCGACGA
Product: 1,4-alpha-glucan branching protein
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MTQSLISAPGRHAYPTSFGATCIDLHRTHFRFWAPACEAVSVELEDGERRASVAMTAREGGWFDATVPFGPGTRYRYRLD GGEAVPDPASRFQPEGVHGPSQVVDPCAYRWRQDDWRGRPWHETVLYELHVGALGGYRGVTQRLGELAALGVTAIELMPL AECPGTRNWGYDGVLPFAPSSSYGRPEELKALVDAAHELGLQVFVDVVYNHFGPDGNWLARYAPSFFRAGKTTGWGPAID FRRDEVGRFFIDNALYWLEEYRIDGLRIDAAHAIDDDHWLGELAALVRAYAGSERHVHLVLENERNSAHLLADVGFDAQW NDDFHNSAHVLLTGERDGYYRAYADKPLQHFARTLAEGFAYQGEPSPLHDGRPRGEPSAHLPPTAFVAFLQNHDQIGNRA FGERLRALVNDDALRAATALLLLAPQVPLLFMGEETGSTQPFQFFTDYEGELADAVREGRRREFAAFPAFANPERRDLIP DPNDPATFARSSPEAVEADRESDDARSWRAFYRGALAVRNGFLVPHLPGTRAEGVSLLDGGAGTGAAHDDPRHGNPGVAP DRSRLLPDDPAQPAEREAAATLAAAIERDQAGGGAPGHPASHHAPAGQAPRALIACWRLGNGARLAIALNLDDTPVALPD PPSGKIVFETPPRVRDALADGRLGPHACLAWLDAPAGTPAEGRGR
Sequences:
>Translated_685_residues MTQSLISAPGRHAYPTSFGATCIDLHRTHFRFWAPACEAVSVELEDGERRASVAMTAREGGWFDATVPFGPGTRYRYRLD GGEAVPDPASRFQPEGVHGPSQVVDPCAYRWRQDDWRGRPWHETVLYELHVGALGGYRGVTQRLGELAALGVTAIELMPL AECPGTRNWGYDGVLPFAPSSSYGRPEELKALVDAAHELGLQVFVDVVYNHFGPDGNWLARYAPSFFRAGKTTGWGPAID FRRDEVGRFFIDNALYWLEEYRIDGLRIDAAHAIDDDHWLGELAALVRAYAGSERHVHLVLENERNSAHLLADVGFDAQW NDDFHNSAHVLLTGERDGYYRAYADKPLQHFARTLAEGFAYQGEPSPLHDGRPRGEPSAHLPPTAFVAFLQNHDQIGNRA FGERLRALVNDDALRAATALLLLAPQVPLLFMGEETGSTQPFQFFTDYEGELADAVREGRRREFAAFPAFANPERRDLIP DPNDPATFARSSPEAVEADRESDDARSWRAFYRGALAVRNGFLVPHLPGTRAEGVSLLDGGAGTGAAHDDPRHGNPGVAP DRSRLLPDDPAQPAEREAAATLAAAIERDQAGGGAPGHPASHHAPAGQAPRALIACWRLGNGARLAIALNLDDTPVALPD PPSGKIVFETPPRVRDALADGRLGPHACLAWLDAPAGTPAEGRGR >Mature_684_residues TQSLISAPGRHAYPTSFGATCIDLHRTHFRFWAPACEAVSVELEDGERRASVAMTAREGGWFDATVPFGPGTRYRYRLDG GEAVPDPASRFQPEGVHGPSQVVDPCAYRWRQDDWRGRPWHETVLYELHVGALGGYRGVTQRLGELAALGVTAIELMPLA ECPGTRNWGYDGVLPFAPSSSYGRPEELKALVDAAHELGLQVFVDVVYNHFGPDGNWLARYAPSFFRAGKTTGWGPAIDF RRDEVGRFFIDNALYWLEEYRIDGLRIDAAHAIDDDHWLGELAALVRAYAGSERHVHLVLENERNSAHLLADVGFDAQWN DDFHNSAHVLLTGERDGYYRAYADKPLQHFARTLAEGFAYQGEPSPLHDGRPRGEPSAHLPPTAFVAFLQNHDQIGNRAF GERLRALVNDDALRAATALLLLAPQVPLLFMGEETGSTQPFQFFTDYEGELADAVREGRRREFAAFPAFANPERRDLIPD PNDPATFARSSPEAVEADRESDDARSWRAFYRGALAVRNGFLVPHLPGTRAEGVSLLDGGAGTGAAHDDPRHGNPGVAPD RSRLLPDDPAQPAEREAAATLAAAIERDQAGGGAPGHPASHHAPAGQAPRALIACWRLGNGARLAIALNLDDTPVALPDP PSGKIVFETPPRVRDALADGRLGPHACLAWLDAPAGTPAEGRGR
Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI189458812, Length=164, Percent_Identity=34.1463414634146, Blast_Score=84, Evalue=4e-16, Organism=Escherichia coli, GI1789839, Length=166, Percent_Identity=34.3373493975904, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI2367229, Length=273, Percent_Identity=25.6410256410256, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554896, Length=201, Percent_Identity=30.8457711442786, Blast_Score=76, Evalue=6e-14, Organism=Caenorhabditis elegans, GI32564391, Length=201, Percent_Identity=30.8457711442786, Blast_Score=76, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6320826, Length=166, Percent_Identity=31.9277108433735, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573410, Length=196, Percent_Identity=30.6122448979592, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR022567 - InterPro: IPR012768 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02922 CBM_48; PF11941 DUF3459 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 74694; Mature: 74562
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSLISAPGRHAYPTSFGATCIDLHRTHFRFWAPACEAVSVELEDGERRASVAMTAREG CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCEEEEEEEECCC GWFDATVPFGPGTRYRYRLDGGEAVPDPASRFQPEGVHGPSQVVDPCAYRWRQDDWRGRP CEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC WHETVLYELHVGALGGYRGVTQRLGELAALGVTAIELMPLAECPGTRNWGYDGVLPFAPS HHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCEECCCC SSYGRPEELKALVDAAHELGLQVFVDVVYNHFGPDGNWLARYAPSFFRAGKTTGWGPAID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHCCCCCCCCCCCC FRRDEVGRFFIDNALYWLEEYRIDGLRIDAAHAIDDDHWLGELAALVRAYAGSERHVHLV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEE LENERNSAHLLADVGFDAQWNDDFHNSAHVLLTGERDGYYRAYADKPLQHFARTLAEGFA EECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHHHHHCC YQGEPSPLHDGRPRGEPSAHLPPTAFVAFLQNHDQIGNRAFGERLRALVNDDALRAATAL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH LLLAPQVPLLFMGEETGSTQPFQFFTDYEGELADAVREGRRREFAAFPAFANPERRDLIP HHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC DPNDPATFARSSPEAVEADRESDDARSWRAFYRGALAVRNGFLVPHLPGTRAEGVSLLDG CCCCCHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECC GAGTGAAHDDPRHGNPGVAPDRSRLLPDDPAQPAEREAAATLAAAIERDQAGGGAPGHPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC SHHAPAGQAPRALIACWRLGNGARLAIALNLDDTPVALPDPPSGKIVFETPPRVRDALAD CCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHC GRLGPHACLAWLDAPAGTPAEGRGR CCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TQSLISAPGRHAYPTSFGATCIDLHRTHFRFWAPACEAVSVELEDGERRASVAMTAREG CCCHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCCCEEEEEEEECCC GWFDATVPFGPGTRYRYRLDGGEAVPDPASRFQPEGVHGPSQVVDPCAYRWRQDDWRGRP CEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC WHETVLYELHVGALGGYRGVTQRLGELAALGVTAIELMPLAECPGTRNWGYDGVLPFAPS HHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCEECCCC SSYGRPEELKALVDAAHELGLQVFVDVVYNHFGPDGNWLARYAPSFFRAGKTTGWGPAID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHCCCCCCCCCCCC FRRDEVGRFFIDNALYWLEEYRIDGLRIDAAHAIDDDHWLGELAALVRAYAGSERHVHLV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEE LENERNSAHLLADVGFDAQWNDDFHNSAHVLLTGERDGYYRAYADKPLQHFARTLAEGFA EECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHCCHHHHHHHHHHHHCC YQGEPSPLHDGRPRGEPSAHLPPTAFVAFLQNHDQIGNRAFGERLRALVNDDALRAATAL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH LLLAPQVPLLFMGEETGSTQPFQFFTDYEGELADAVREGRRREFAAFPAFANPERRDLIP HHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC DPNDPATFARSSPEAVEADRESDDARSWRAFYRGALAVRNGFLVPHLPGTRAEGVSLLDG CCCCCHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECC GAGTGAAHDDPRHGNPGVAPDRSRLLPDDPAQPAEREAAATLAAAIERDQAGGGAPGHPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC SHHAPAGQAPRALIACWRLGNGARLAIALNLDDTPVALPDPPSGKIVFETPPRVRDALAD CCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHC GRLGPHACLAWLDAPAGTPAEGRGR CCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]