| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ilvA [H]
Identifier: 238024865
GI number: 238024865
Start: 1909777
End: 1911420
Strand: Reverse
Name: ilvA [H]
Synonym: bglu_2g15050
Alternate gene names: 238024865
Gene position: 1911420-1909777 (Counterclockwise)
Preceding gene: 238024866
Following gene: 238024862
Centisome position: 67.61
GC content: 71.23
Gene sequence:
>1644_bases ATGTCATCGCCGTCCCCCCGTCGTCCGGAATCCGTCACACCGCCGCGCGCGCGTTCGTCCGAGGCGTTGGCCATGCCGCC GGCGGTGAAGCCGCCCGCGCAGCCGGCCGATTGCGCCGCCGCCGGCATCGATGCCTACCTGAAGAAGATCCTCACCGCGC GCGTCTACGACGTGGCGGTCGAAACCGCGCTCGAGGCGGCCCGCAACCTGTCCGCGCGCGTGCACAACCGCGTGCTGCTC AAGCGCGAGGACAACCAGCCGGTGTTCTCGTTCAAGCTGCGCGGCGCCTACAACCGCATGGCCCAGCTGGGCGCCGACGC GCTCGCGCGCGGCGTGATCACCGCCTCGGCCGGCAACCACGCCCAGGGCGTCGCGTTCTCGGCCGCGCGCCTGGGCGTGA AGGCGGTGATCATGGTGCCGGTCACCACCCCGCAGGTCAAGGTCGACGCGGTGCGCGCGCACGGCGGGCCGACCGTCGAG GTGATCCAGGCCGGCGAATCGTTCAGCGACGCCTATGCCCACGCGCTCGAGCTGCAGCGCCAGCGCGAGCTGACCTTCGT GCACCCGTTCGACGATCCCGAGGTGATCGCCGGCCAGGGCACCGTGGCGATGGAAGTGCTGCGCCAGCACCAGGGGCCGA TCCACGCGATCTTCGTGCCGATCGGCGGCGGCGGGCTCGCGGCCGGCGTGGCCGCCTACGTGAAGGCGGTGCGCCCGGAG ATCCGCGTGATCGGGGTGCAGACCGAGGACTCCTGCGCGATGGCGAAGTCGATCCGCGCCGGCGAGCGCGTGATGCTCGC CGAGGTGGGCCTGTTCTCGGACGGCACGGCCGTGAAGCAGGTCGGCGAGGAAACGTTCCGGCTCTGCCGCGCGCTGCTCG ACGAGGTGATCACGGTGGACACCGACGCGCTGTGCGCGGCGATCAAGGACGTGTTCCAGGACACGCGCAGCGTGCTGGAG CCGGCCGGCGCGCTGGCCGTGGCGGGCGCCAAGCGCTACGCGGCGCGCACCGGCATCGAGGGCGAGACGCTGGTGGCGAT CACCTCGGGCGCCAACATGAACTTCGACCGGATGCGCTTCGTGGCCGAGCGCGCCGAGGTGGGCGAGGCGCGCGAGGCGG TGTTCGCGGTGACGATCCCCGAGGAGCGCGGCAGCTTCCGGCGCTTCTGCGAGCTGGTGGGCGAGCGCAGCGTGACGGAG TTCAACTACCGGATCGCCGACGAGCGCGCCGCGCACATTTTCGTGGGCGTGCAGATCCGGCGCCGCGAGGAATCGGCCGA GATCGCGGCGAACTTCGGCGCGCACGGCTTCGAGGCGGCCGACCTGACCGGCGACGAGCTGTCGAAGGACCACATTCGCT ACATGGTGGGCGGGCGCTCGCCGCTCTCGCGCGACGAGCGGCTGTTCCGCTTCGAGTTTCCGGAGCGCCCGGGCGCGCTG ATGAAGTTTCTCTCGGCGATGGCGCCGAACTGGAACATCAGCCTGTTCCACTACCGCAACCAGGGCGCGGACTACAGCTC GATCCTGGTCGGGCTGCAGGTGCCCGGCGCCGATCACGCCACGTTCGACCGGTTCCTGGCCGCGCTCGGCTATCCCTATC ACGAAGAGACCGCGAACCCGGCCTACCGGCTGTTCCTGGCCTAG
Upstream 100 bases:
>100_bases AATGGTGGGTTAGCGCGCGCAGGAAGCCGACACGAAACCCGCCCCCGAGGCGGGTTTTTCGTATCCGTCTCCGGGCATGA ATCCCAGCCAGGAGCCTCCG
Downstream 100 bases:
>100_bases CGCCCGACGCCGGGCCGGGGCGCGGTGCGCCCGCCGGCGACGGCGCGGGCGCGCCCGCCGCGTTCACTCGAAGGCCGGGA AGCCCGCGCGCCCCTGCGTG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MSSPSPRRPESVTPPRARSSEALAMPPAVKPPAQPADCAAAGIDAYLKKILTARVYDVAVETALEAARNLSARVHNRVLL KREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNHAQGVAFSAARLGVKAVIMVPVTTPQVKVDAVRAHGGPTVE VIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPE IRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQVGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLE PAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTE FNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGAL MKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHATFDRFLAALGYPYHEETANPAYRLFLA
Sequences:
>Translated_547_residues MSSPSPRRPESVTPPRARSSEALAMPPAVKPPAQPADCAAAGIDAYLKKILTARVYDVAVETALEAARNLSARVHNRVLL KREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNHAQGVAFSAARLGVKAVIMVPVTTPQVKVDAVRAHGGPTVE VIQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPE IRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQVGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLE PAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTE FNYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGAL MKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHATFDRFLAALGYPYHEETANPAYRLFLA >Mature_546_residues SSPSPRRPESVTPPRARSSEALAMPPAVKPPAQPADCAAAGIDAYLKKILTARVYDVAVETALEAARNLSARVHNRVLLK REDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNHAQGVAFSAARLGVKAVIMVPVTTPQVKVDAVRAHGGPTVEV IQAGESFSDAYAHALELQRQRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEI RVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQVGEETFRLCRALLDEVITVDTDALCAAIKDVFQDTRSVLEP AGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEF NYRIADERAAHIFVGVQIRRREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGALM KFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHATFDRFLAALGYPYHEETANPAYRLFLA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=297, Percent_Identity=32.6599326599327, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI33469958, Length=317, Percent_Identity=28.391167192429, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1790207, Length=516, Percent_Identity=54.6511627906977, Blast_Score=526, Evalue=1e-150, Organism=Escherichia coli, GI1789505, Length=311, Percent_Identity=36.0128617363344, Blast_Score=165, Evalue=8e-42, Organism=Caenorhabditis elegans, GI71991565, Length=318, Percent_Identity=29.559748427673, Blast_Score=132, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17537387, Length=385, Percent_Identity=30.6493506493506, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17508781, Length=276, Percent_Identity=30.4347826086957, Blast_Score=121, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6320930, Length=516, Percent_Identity=48.062015503876, Blast_Score=472, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322631, Length=306, Percent_Identity=32.0261437908497, Blast_Score=140, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6319788, Length=271, Percent_Identity=25.0922509225092, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI21355833, Length=314, Percent_Identity=28.9808917197452, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=27.4509803921569, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 59216; Mature: 59085
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00889 CNMP_BINDING_2 ; PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSPRRPESVTPPRARSSEALAMPPAVKPPAQPADCAAAGIDAYLKKILTARVYDVAV CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETALEAARNLSARVHNRVLLKREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNH HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECHHHHHHHHHCHHHHHHCEEEECCCCC AQGVAFSAARLGVKAVIMVPVTTPQVKVDAVRAHGGPTVEVIQAGESFSDAYAHALELQR CCCHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH QRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPE HCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC IRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQVGEETFRLCRALLDEVITVD EEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRF HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH VAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEFNYRIADERAAHIFVGVQIR HHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEE RREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGAL ECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEECCCCCCHH MKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHATFDRFLAALGYPYHEETANP HHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCC AYRLFLA CEEEEEC >Mature Secondary Structure SSPSPRRPESVTPPRARSSEALAMPPAVKPPAQPADCAAAGIDAYLKKILTARVYDVAV CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ETALEAARNLSARVHNRVLLKREDNQPVFSFKLRGAYNRMAQLGADALARGVITASAGNH HHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECHHHHHHHHHCHHHHHHCEEEECCCCC AQGVAFSAARLGVKAVIMVPVTTPQVKVDAVRAHGGPTVEVIQAGESFSDAYAHALELQR CCCHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH QRELTFVHPFDDPEVIAGQGTVAMEVLRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPE HCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC IRVIGVQTEDSCAMAKSIRAGERVMLAEVGLFSDGTAVKQVGEETFRLCRALLDEVITVD EEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TDALCAAIKDVFQDTRSVLEPAGALAVAGAKRYAARTGIEGETLVAITSGANMNFDRMRF HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH VAERAEVGEAREAVFAVTIPEERGSFRRFCELVGERSVTEFNYRIADERAAHIFVGVQIR HHHHHHCCCCCCEEEEEEECHHCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEE RREESAEIAANFGAHGFEAADLTGDELSKDHIRYMVGGRSPLSRDERLFRFEFPERPGAL ECCHHHHHHHHCCCCCCEECCCCCCCCCHHHHEEEECCCCCCCCCCCEEEEECCCCCCHH MKFLSAMAPNWNISLFHYRNQGADYSSILVGLQVPGADHATFDRFLAALGYPYHEETANP HHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCC AYRLFLA CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA