| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yvyE [H]
Identifier: 238024864
GI number: 238024864
Start: 1909123
End: 1909713
Strand: Direct
Name: yvyE [H]
Synonym: bglu_2g15040
Alternate gene names: 238024864
Gene position: 1909123-1909713 (Clockwise)
Preceding gene: 238024863
Following gene: 238024870
Centisome position: 67.52
GC content: 72.25
Gene sequence:
>591_bases ATGACCTACACCCTCGCGCAAACCTGTACGCAGGAGATCGAGATCCGCAAGAGCCGGTTCATCGCCCAGGCGATTCCGGT GGCCGATCGCGATGCCGCGATGGCCGAGCTGCAACGCCTGCGCGACGCGCATCCCGCCGCCACGCACGTCTGCTGGGCGC TGCTCGCGGGCGGCCAGTCGGGCATGTCCGACGACGGCGAGCCGTCCGGCACGGCCGGCCGGCCGATCCTCGAAGTGCTG CGCCATCACGACCTGGATGGCGTGCTGGCCGCCGTGATTCGCTATTACGGCGGCGTGAAGCTCGGCGCGGGCGGCCTGGT GCGCGCCTACACCGATGCGATCGCGGGCGCGCTGCTCGGCGCGCAGCGCGTCGAGCGCATCGCGCTCGCGCGGCTCGCGA TCGAGATCGGCTATCCCGACGAGGCACGCGTGCGGCGCTGGATCGAACAGAGCGGCGCCGAACTGTTGGACAGTGCCTAC GGCATGACCGTGCGGCTGGTCGTGCGGCTGCCGGTGACCGAGGTGGCCGCCGCGCGCGAGACGCTGCGCGACGCCACGCA GGGGCGCGCGGGCTTCCCGGCCTTCGAGTGA
Upstream 100 bases:
>100_bases GCTCACGCCCGCCCCGCCTCGTGCTCCGCTGCACGACGCCGTCGGGCGCGGGCCCCGCGAACCCGCCGCCGAACCCGAGA CGCCGCGCCGCCGCCCGACC
Downstream 100 bases:
>100_bases ACGCGGCGGGCGCGCCCGCGCCGTCGCCGGCGGGCGCACCGCGCCCCGGCCCGGCGTCGGGCGCTAGGCCAGGAACAGCC GGTAGGCCGGGTTCGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQSGMSDDGEPSGTAGRPILEVL RHHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLGAQRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAY GMTVRLVVRLPVTEVAAARETLRDATQGRAGFPAFE
Sequences:
>Translated_196_residues MTYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQSGMSDDGEPSGTAGRPILEVL RHHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLGAQRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAY GMTVRLVVRLPVTEVAAARETLRDATQGRAGFPAFE >Mature_195_residues TYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQSGMSDDGEPSGTAGRPILEVLR HHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLGAQRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAYG MTVRLVVRLPVTEVAAARETLRDATQGRAGFPAFE
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=188, Percent_Identity=36.1702127659575, Blast_Score=87, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 21080; Mature: 20949
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLG CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH AQRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAYGMTVRLVVRLPVTEVAAARE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCHHHHHHHHH TLRDATQGRAGFPAFE HHHHHHCCCCCCCCCC >Mature Secondary Structure TYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLG CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH AQRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAYGMTVRLVVRLPVTEVAAARE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCHHHHHHHHH TLRDATQGRAGFPAFE HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]