| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yxlA [H]
Identifier: 238024861
GI number: 238024861
Start: 1905914
End: 1907371
Strand: Reverse
Name: yxlA [H]
Synonym: bglu_2g15010
Alternate gene names: 238024861
Gene position: 1907371-1905914 (Counterclockwise)
Preceding gene: 238024862
Following gene: 238024860
Centisome position: 67.46
GC content: 69.27
Gene sequence:
>1458_bases ATGGAACATCCCGGCACGGCCGACCTGAGCGGCGCCGCGGCGCCCGCGCAGGCACGCTTCTCGACGATCGAGACCCGCTC GATCGACTATGTGCCCGACAGCGAGCGGCACGGCAGGGTCATCGACCAGGGGCCGTTCTGGTTCCTCGGCAATTTCCAGT TCTTCACCATCGCGATCGGCTTCGTCGGCCCGGGCATGGGGCTTTCGCTTGGCTACACGATCCTCTCGGGCGTGCTGGGC ATCCTGTTCGGCACCCTGTTCATGGCGTTCCACGCCTCGCAGGGCGCCCATCTGGGGCTGCCGCAGATGATCCAGTCGCG CGCGCAGTTCGGCTATCGCGGCGTGGTGGTGGTGCTGCTCGCCACCGCGTTTACCTTCGTCGCGTTCAACGTGGTGGACG TGGTACTGATGGCGAGCGGCCTGCATGCGATCTTCGGCTGGTCGCCCACCGCGATCACGCTCGCCACGGCGCTGCTCGCG CTGCTGCTCGCCGTGTACGGCCACGACTGGCTGCACCGCGCGTTCAAGTGGATGCTCTACGCGAGCCTGCCGCTCTACGT GGTGCTGTCGGCCGCGATCCTCACCGGCGGCGTGGCGCCGAAGGTCGGCCACGCGGGCGGCTTCAGCCTCGTCGCGTTCG CCTCGCAGTTCGCGGCCAGCGCGAGCTACAACATCACCTACGCCCCCTACGTATCCGACTATTCGCGCTACCTGCCGCGC CACACGCGGCCGCGCGCGATCATCGGCGCGGTGTTCGCCGGTGCCGCCTCGTCGGCGATCTGGCTGATCGCGCTCGGCGC CTGGCTCGCCTCGCGGCTCGGCGCGTCGGACGGGCTGATCGCGCTGAACGCGGCCGGCAACATGCTCTTCCACGGCTTCG GCGCGCTGATCTCGATCGTCTCGATCGGCGCGATGGTCGCCACCATGGGCCTCAACAACTACAGCGCGATGCTGACGCTG ATCACCGGCCTCGATTCGTTTCGCGCCGTCAGGCCCACGCGCGCGATCCGCGTCGTGACGCTGGTGCTGGTGAGCGCCGC CTGGGTCGCGATCTCGATGCTGTTGACCGGCAACGCGATCGATATCCTGTTCGCGGCGCTGACGATGATGCTCTATCTGC TCGCGCCGTGGACCGCCGTGAATCTGGTCGACTACTTCTTCGTGCGGCGCGGCCGCTATGCGATCACGCACCTGTTCTCG GCCGACGGCATCTACGGCGCCTGGGGCCTGCGCGGGCTTGCCTCCTATGCGATCGGCCTGCTCGCCTCGGTGCCGTTCTT CGTGCTGCCGGGCGTTTACACGGGCGCGCTCGCGGCGCGCCTGGGCGGCGTGGACGTGGCCTGGGCGGTCGGGCTCGCGG TGGCGACGCTCGCCTACCTGCTGCCCTGGCGCGGCGTGACGGCGCGCGATGAAGCTGCGGCGATCGGCGAGAGCGACGAC GCGCTGGGGCTGCGCTAA
Upstream 100 bases:
>100_bases CCGCCGGCGGCGCCTGAGCCTTCCCCCAAAGCAGCCGGACCTGACGTTGGCCGCCACCCGGCGCGGCGCATGAATCAGGA TAACTGAACAAGGAACCCAC
Downstream 100 bases:
>100_bases AGCGTGGCAGGCCACGTCAAGGTCGCGCCGATACATCGCCAATGCGTCATCGATATGATTTCGTCCGCCATCGCCGTTGA CCGGCCGCGGGCTGCTCACC
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD ALGLR
Sequences:
>Translated_485_residues MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD ALGLR >Mature_485_residues MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD ALGLR
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320897, Length=389, Percent_Identity=24.4215938303342, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 51273; Mature: 51273
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEEEE FVGPGMGLSLGYTILSGVLGILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH ATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLALLLAVYGHDWLHRAFKWMLY HHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCC HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH SIGAMVATMGLNNYSAMLTLITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFSADGIYGAWGLRGLASYAIGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH LASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD HHHCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC ALGLR CCCCC >Mature Secondary Structure MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIG CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEEEE FVGPGMGLSLGYTILSGVLGILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH ATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLALLLAVYGHDWLHRAFKWMLY HHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCC HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH SIGAMVATMGLNNYSAMLTLITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFSADGIYGAWGLRGLASYAIGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH LASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD HHHCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC ALGLR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]