Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is yxlA [H]

Identifier: 238024861

GI number: 238024861

Start: 1905914

End: 1907371

Strand: Reverse

Name: yxlA [H]

Synonym: bglu_2g15010

Alternate gene names: 238024861

Gene position: 1907371-1905914 (Counterclockwise)

Preceding gene: 238024862

Following gene: 238024860

Centisome position: 67.46

GC content: 69.27

Gene sequence:

>1458_bases
ATGGAACATCCCGGCACGGCCGACCTGAGCGGCGCCGCGGCGCCCGCGCAGGCACGCTTCTCGACGATCGAGACCCGCTC
GATCGACTATGTGCCCGACAGCGAGCGGCACGGCAGGGTCATCGACCAGGGGCCGTTCTGGTTCCTCGGCAATTTCCAGT
TCTTCACCATCGCGATCGGCTTCGTCGGCCCGGGCATGGGGCTTTCGCTTGGCTACACGATCCTCTCGGGCGTGCTGGGC
ATCCTGTTCGGCACCCTGTTCATGGCGTTCCACGCCTCGCAGGGCGCCCATCTGGGGCTGCCGCAGATGATCCAGTCGCG
CGCGCAGTTCGGCTATCGCGGCGTGGTGGTGGTGCTGCTCGCCACCGCGTTTACCTTCGTCGCGTTCAACGTGGTGGACG
TGGTACTGATGGCGAGCGGCCTGCATGCGATCTTCGGCTGGTCGCCCACCGCGATCACGCTCGCCACGGCGCTGCTCGCG
CTGCTGCTCGCCGTGTACGGCCACGACTGGCTGCACCGCGCGTTCAAGTGGATGCTCTACGCGAGCCTGCCGCTCTACGT
GGTGCTGTCGGCCGCGATCCTCACCGGCGGCGTGGCGCCGAAGGTCGGCCACGCGGGCGGCTTCAGCCTCGTCGCGTTCG
CCTCGCAGTTCGCGGCCAGCGCGAGCTACAACATCACCTACGCCCCCTACGTATCCGACTATTCGCGCTACCTGCCGCGC
CACACGCGGCCGCGCGCGATCATCGGCGCGGTGTTCGCCGGTGCCGCCTCGTCGGCGATCTGGCTGATCGCGCTCGGCGC
CTGGCTCGCCTCGCGGCTCGGCGCGTCGGACGGGCTGATCGCGCTGAACGCGGCCGGCAACATGCTCTTCCACGGCTTCG
GCGCGCTGATCTCGATCGTCTCGATCGGCGCGATGGTCGCCACCATGGGCCTCAACAACTACAGCGCGATGCTGACGCTG
ATCACCGGCCTCGATTCGTTTCGCGCCGTCAGGCCCACGCGCGCGATCCGCGTCGTGACGCTGGTGCTGGTGAGCGCCGC
CTGGGTCGCGATCTCGATGCTGTTGACCGGCAACGCGATCGATATCCTGTTCGCGGCGCTGACGATGATGCTCTATCTGC
TCGCGCCGTGGACCGCCGTGAATCTGGTCGACTACTTCTTCGTGCGGCGCGGCCGCTATGCGATCACGCACCTGTTCTCG
GCCGACGGCATCTACGGCGCCTGGGGCCTGCGCGGGCTTGCCTCCTATGCGATCGGCCTGCTCGCCTCGGTGCCGTTCTT
CGTGCTGCCGGGCGTTTACACGGGCGCGCTCGCGGCGCGCCTGGGCGGCGTGGACGTGGCCTGGGCGGTCGGGCTCGCGG
TGGCGACGCTCGCCTACCTGCTGCCCTGGCGCGGCGTGACGGCGCGCGATGAAGCTGCGGCGATCGGCGAGAGCGACGAC
GCGCTGGGGCTGCGCTAA

Upstream 100 bases:

>100_bases
CCGCCGGCGGCGCCTGAGCCTTCCCCCAAAGCAGCCGGACCTGACGTTGGCCGCCACCCGGCGCGGCGCATGAATCAGGA
TAACTGAACAAGGAACCCAC

Downstream 100 bases:

>100_bases
AGCGTGGCAGGCCACGTCAAGGTCGCGCCGATACATCGCCAATGCGTCATCGATATGATTTCGTCCGCCATCGCCGTTGA
CCGGCCGCGGGCTGCTCACC

Product: cytosine/purines, uracil, thiamine, allantoin permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG
ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA
LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR
HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL
ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS
ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD
ALGLR

Sequences:

>Translated_485_residues
MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG
ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA
LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR
HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL
ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS
ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD
ALGLR
>Mature_485_residues
MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIGFVGPGMGLSLGYTILSGVLG
ILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLLATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLA
LLLAVYGHDWLHRAFKWMLYASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR
HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIVSIGAMVATMGLNNYSAMLTL
ITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAIDILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFS
ADGIYGAWGLRGLASYAIGLLASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD
ALGLR

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320897, Length=389, Percent_Identity=24.4215938303342, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 51273; Mature: 51273

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIG
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEEEE
FVGPGMGLSLGYTILSGVLGILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
ATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLALLLAVYGHDWLHRAFKWMLY
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCC
HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
SIGAMVATMGLNNYSAMLTLITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFSADGIYGAWGLRGLASYAIGL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD
HHHCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ALGLR
CCCCC
>Mature Secondary Structure
MEHPGTADLSGAAAPAQARFSTIETRSIDYVPDSERHGRVIDQGPFWFLGNFQFFTIAIG
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEECCEEEEEEEE
FVGPGMGLSLGYTILSGVLGILFGTLFMAFHASQGAHLGLPQMIQSRAQFGYRGVVVVLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
ATAFTFVAFNVVDVVLMASGLHAIFGWSPTAITLATALLALLLAVYGHDWLHRAFKWMLY
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ASLPLYVVLSAAILTGGVAPKVGHAGGFSLVAFASQFAASASYNITYAPYVSDYSRYLPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCC
HTRPRAIIGAVFAGAASSAIWLIALGAWLASRLGASDGLIALNAAGNMLFHGFGALISIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
SIGAMVATMGLNNYSAMLTLITGLDSFRAVRPTRAIRVVTLVLVSAAWVAISMLLTGNAI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DILFAALTMMLYLLAPWTAVNLVDYFFVRRGRYAITHLFSADGIYGAWGLRGLASYAIGL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LASVPFFVLPGVYTGALAARLGGVDVAWAVGLAVATLAYLLPWRGVTARDEAAAIGESDD
HHHCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ALGLR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]