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The map label for this gene is yobA [H]

Identifier: 238024854

GI number: 238024854

Start: 1895885

End: 1896253

Strand: Direct

Name: yobA [H]

Synonym: bglu_2g14940

Alternate gene names: 238024854

Gene position: 1895885-1896253 (Clockwise)

Preceding gene: 238024853

Following gene: 238024859

Centisome position: 67.06

GC content: 72.09

Gene sequence:

>369_bases
ATGACACTTCGCCAGTTCGCTGCACGCGGCGCTGCCGCCCTGCTGCTCGCGGCCGCCGCGCCGCTCGCGTTCGCGCACGC
GCATCCGACCGAACGCACGCCCGGCGCCGGCGCCACCGCGCCGGCCTCGACCACGGCCGTCACGATCGATTTCGACGAGG
GGCTCGAACCCGCGTTCAGCTCGATCAAGGTGACCGACGCGGCGGGCCAGTCCGTCACGCGCGGCAAGTCGAGCGTGGGC
GGTGATGCCGGCAAGCGCATGAGCGTCGCGCTCGCCGCGCTGAAGCCGGGCGTCTATACCGTCCACTGGGTCGCCGTCGC
CACCGACGGCCATCGCACCCAGGGCACCTATACGTTCACCGTGCAGTGA

Upstream 100 bases:

>100_bases
CTCAGTTCGCCGTGCCTGCTGGAAAGCCCGAAGACGATGTCGAAATGAGCGGCCGCGCCTTGCCATGGCCCCCCTCCATC
ACGCCACCAGGAAGCCTTCC

Downstream 100 bases:

>100_bases
GCGGCCGGGCTGCCCCGGCGCGCGATGCGCCGCCGGCAGCATCCGACATGAAACGGCGCCGCCGGCCAGACAGCCGGCGT
CGCCGTTTTCGATTTCCGTT

Product: Copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MTLRQFAARGAAALLLAAAAPLAFAHAHPTERTPGAGATAPASTTAVTIDFDEGLEPAFSSIKVTDAAGQSVTRGKSSVG
GDAGKRMSVALAALKPGVYTVHWVAVATDGHRTQGTYTFTVQ

Sequences:

>Translated_122_residues
MTLRQFAARGAAALLLAAAAPLAFAHAHPTERTPGAGATAPASTTAVTIDFDEGLEPAFSSIKVTDAAGQSVTRGKSSVG
GDAGKRMSVALAALKPGVYTVHWVAVATDGHRTQGTYTFTVQ
>Mature_121_residues
TLRQFAARGAAALLLAAAAPLAFAHAHPTERTPGAGATAPASTTAVTIDFDEGLEPAFSSIKVTDAAGQSVTRGKSSVGG
DAGKRMSVALAALKPGVYTVHWVAVATDGHRTQGTYTFTVQ

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=112, Percent_Identity=39.2857142857143, Blast_Score=83, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 12367; Mature: 12236

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRQFAARGAAALLLAAAAPLAFAHAHPTERTPGAGATAPASTTAVTIDFDEGLEPAFS
CCHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
SIKVTDAAGQSVTRGKSSVGGDAGKRMSVALAALKPGVYTVHWVAVATDGHRTQGTYTFT
EEEEECCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEE
VQ
EC
>Mature Secondary Structure 
TLRQFAARGAAALLLAAAAPLAFAHAHPTERTPGAGATAPASTTAVTIDFDEGLEPAFS
CHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
SIKVTDAAGQSVTRGKSSVGGDAGKRMSVALAALKPGVYTVHWVAVATDGHRTQGTYTFT
EEEEECCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEE
VQ
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]