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The map label for this gene is 238024852

Identifier: 238024852

GI number: 238024852

Start: 1894694

End: 1895338

Strand: Direct

Name: 238024852

Synonym: bglu_2g14920

Alternate gene names: NA

Gene position: 1894694-1895338 (Clockwise)

Preceding gene: 238024851

Following gene: 238024853

Centisome position: 67.01

GC content: 68.06

Gene sequence:

>645_bases
ATGTCCACCCGATCTGCCCCTCCCGCGTTCCGCGCCTCGCGGCGCGCGGCCACCCTCGCGATCGTCGGCGCGCTCGCCGG
CGTTTCGCTGCTGTCCGGCTGCAAGCCGAGCGAGCCTTCGTTCACCAATCTCGACATCACCGGCAACACGCAGTTCGGCC
GCGACTTCTCGCTGCCCGACACCGACGGCAGGATCCGCACGCTGGCCGACTATCGCGGCAAGGTCGTGGTGCTGCTGTTC
GGCTACACGCATTGCCCCGACGTCTGCCCGACCACGCTCGCCGAACTGGCGCAGGCGCTGAACCAGCTCGGCCCCGACGT
CGCGAAACGCGTGCAGGTGCTGTTCGTCAGCGTCGATCCGAAGCGCGACACGAACCCGGTGCTCGCGCAATACGTGAGCG
CCTTCGATCCGTCGTTCCGCGCGCTGCGGCCCGCCAACGAGGCACAGCTGAAACAGGTGAGCCGCGACTTCCGCATCACC
TACGAGCAGGTGGCCGGCTCCAATGCCGACAACTATTCGATGAACCACACCGCCGCCAGCATCGTGTTCGATCCGAGCGG
CAAGCCGCGCCTGTTCGCGCGCGACGGCCAGGGCACCGCGCCGTGGGTTCACGATCTGCCGCTGCTGCTCAAGCAAGACG
CGTGA

Upstream 100 bases:

>100_bases
CGCCCGACGGCCGCATGGGCTCGCCCGTGCGGCTGCCGCGTCCGCCCGGCGCGCGATCGAGGCTTTCCTTCGATGCTCCG
TTTTCGTGGCGACCTTCACC

Downstream 100 bases:

>100_bases
GCCGCAGGCCGCGCTGCCCCACCCTCGAATCCCATCAGGAGTCCAATATGAACATCGCATTCCGTCTGCTCGCCGCCGTC
CCCCTCGCTGCTGCCTGCGC

Product: Electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTRSAPPAFRASRRAATLAIVGALAGVSLLSGCKPSEPSFTNLDITGNTQFGRDFSLPDTDGRIRTLADYRGKVVVLLF
GYTHCPDVCPTTLAELAQALNQLGPDVAKRVQVLFVSVDPKRDTNPVLAQYVSAFDPSFRALRPANEAQLKQVSRDFRIT
YEQVAGSNADNYSMNHTAASIVFDPSGKPRLFARDGQGTAPWVHDLPLLLKQDA

Sequences:

>Translated_214_residues
MSTRSAPPAFRASRRAATLAIVGALAGVSLLSGCKPSEPSFTNLDITGNTQFGRDFSLPDTDGRIRTLADYRGKVVVLLF
GYTHCPDVCPTTLAELAQALNQLGPDVAKRVQVLFVSVDPKRDTNPVLAQYVSAFDPSFRALRPANEAQLKQVSRDFRIT
YEQVAGSNADNYSMNHTAASIVFDPSGKPRLFARDGQGTAPWVHDLPLLLKQDA
>Mature_213_residues
STRSAPPAFRASRRAATLAIVGALAGVSLLSGCKPSEPSFTNLDITGNTQFGRDFSLPDTDGRIRTLADYRGKVVVLLFG
YTHCPDVCPTTLAELAQALNQLGPDVAKRVQVLFVSVDPKRDTNPVLAQYVSAFDPSFRALRPANEAQLKQVSRDFRITY
EQVAGSNADNYSMNHTAASIVFDPSGKPRLFARDGQGTAPWVHDLPLLLKQDA

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=134, Percent_Identity=37.3134328358209, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI281182722, Length=134, Percent_Identity=37.3134328358209, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI281182716, Length=134, Percent_Identity=37.3134328358209, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI153791313, Length=134, Percent_Identity=37.3134328358209, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4759068, Length=194, Percent_Identity=32.9896907216495, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17531419, Length=176, Percent_Identity=27.8409090909091, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6319498, Length=185, Percent_Identity=30.8108108108108, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319511, Length=142, Percent_Identity=30.2816901408451, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19920710, Length=178, Percent_Identity=30.8988764044944, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 23192; Mature: 23061

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRSAPPAFRASRRAATLAIVGALAGVSLLSGCKPSEPSFTNLDITGNTQFGRDFSLPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC
TDGRIRTLADYRGKVVVLLFGYTHCPDVCPTTLAELAQALNQLGPDVAKRVQVLFVSVDP
CCCCEEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHEEEEEEEEECC
KRDTNPVLAQYVSAFDPSFRALRPANEAQLKQVSRDFRITYEQVAGSNADNYSMNHTAAS
CCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCEEEE
IVFDPSGKPRLFARDGQGTAPWVHDLPLLLKQDA
EEECCCCCCEEEEECCCCCCCHHHHCHHHHCCCC
>Mature Secondary Structure 
STRSAPPAFRASRRAATLAIVGALAGVSLLSGCKPSEPSFTNLDITGNTQFGRDFSLPD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCC
TDGRIRTLADYRGKVVVLLFGYTHCPDVCPTTLAELAQALNQLGPDVAKRVQVLFVSVDP
CCCCEEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHEEEEEEEEECC
KRDTNPVLAQYVSAFDPSFRALRPANEAQLKQVSRDFRITYEQVAGSNADNYSMNHTAAS
CCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCEEEE
IVFDPSGKPRLFARDGQGTAPWVHDLPLLLKQDA
EEECCCCCCEEEEECCCCCCCHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]