| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024844
Identifier: 238024844
GI number: 238024844
Start: 1887237
End: 1887668
Strand: Reverse
Name: 238024844
Synonym: bglu_2g14840
Alternate gene names: NA
Gene position: 1887668-1887237 (Counterclockwise)
Preceding gene: 238024855
Following gene: 238024843
Centisome position: 66.76
GC content: 61.81
Gene sequence:
>432_bases ATGCCGGCCGGCCATTATCTGTCAGGGAAAATCACGATGACCGAATCCCGCAATCCCCGATCCGCACAACATTATCCGCG TCCGGCGCCCCTGCAGGGCTGGGTCGCGATCGACCCTGCGGTGGTGCCGCCCGCGTCGCAGAAGGCGCTGCGCGATGCGA TCGCGCTCGAGAAGCAGCCGGCCACCGATTACAACGACCTGCTGTGGATCATGGCCCAGCAGTCGAGCGGGGTGGTGAAC GCACAGCGTCCGGATTCGACCGCGCGCGGCCTGTTTCAACTGCTGCGTGCGCAATACGGATTGAATCCGAACGGCGAGAA ATCATTCGGCATTGCGGTGGAGGAGGCGCAAGGCGGCTTGCGCTATATTTACGGCCGCTATCATTCGGCTTACCAGGCCA GGAAGTTCTGGGAAAGAAACCGCTGGTATTGA
Upstream 100 bases:
>100_bases GCTAATCCATCGAGAAAATCGATTGCGCACCGTGCATTTACGCGCGCGGGCGCAGCGTTTTATAGTCGCCGTCGGCTCAC CCGGCGGCGCCGGCAAGGCA
Downstream 100 bases:
>100_bases ACGCGATGATTTCCATTCGCTCCACGGTCGTGGCGGGCGTGGTATCGATCGTGCTGGCAGCCGGGTTCGGCGACGCGGCG CGCGCCGCGAAGCCGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPAGHYLSGKITMTESRNPRSAQHYPRPAPLQGWVAIDPAVVPPASQKALRDAIALEKQPATDYNDLLWIMAQQSSGVVN AQRPDSTARGLFQLLRAQYGLNPNGEKSFGIAVEEAQGGLRYIYGRYHSAYQARKFWERNRWY
Sequences:
>Translated_143_residues MPAGHYLSGKITMTESRNPRSAQHYPRPAPLQGWVAIDPAVVPPASQKALRDAIALEKQPATDYNDLLWIMAQQSSGVVN AQRPDSTARGLFQLLRAQYGLNPNGEKSFGIAVEEAQGGLRYIYGRYHSAYQARKFWERNRWY >Mature_142_residues PAGHYLSGKITMTESRNPRSAQHYPRPAPLQGWVAIDPAVVPPASQKALRDAIALEKQPATDYNDLLWIMAQQSSGVVNA QRPDSTARGLFQLLRAQYGLNPNGEKSFGIAVEEAQGGLRYIYGRYHSAYQARKFWERNRWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16119; Mature: 15988
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGHYLSGKITMTESRNPRSAQHYPRPAPLQGWVAIDPAVVPPASQKALRDAIALEKQP CCCCCEECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC ATDYNDLLWIMAQQSSGVVNAQRPDSTARGLFQLLRAQYGLNPNGEKSFGIAVEEAQGGL CCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC RYIYGRYHSAYQARKFWERNRWY EEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAGHYLSGKITMTESRNPRSAQHYPRPAPLQGWVAIDPAVVPPASQKALRDAIALEKQP CCCCEECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC ATDYNDLLWIMAQQSSGVVNAQRPDSTARGLFQLLRAQYGLNPNGEKSFGIAVEEAQGGL CCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC RYIYGRYHSAYQARKFWERNRWY EEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA