| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is fhuA [H]
Identifier: 238024840
GI number: 238024840
Start: 1880937
End: 1883237
Strand: Reverse
Name: fhuA [H]
Synonym: bglu_2g14800
Alternate gene names: 238024840
Gene position: 1883237-1880937 (Counterclockwise)
Preceding gene: 238024842
Following gene: 238024839
Centisome position: 66.61
GC content: 73.14
Gene sequence:
>2301_bases TTGCCGGCACGGAGCGGCCCGACAGGCCGTGCGCGCCGCCGCGCGCGAGATCGCCCGCCGCTCTTGGCCGCCCACCCTGG CAACCCGCATTCGACCCACGACATGACATACCGCCCGACAGCCTTCCGCCCGCCTTCCGCGCGCCGCCGCGCCTGCGCGG GCATGGTCGCCGTCGCCTCGCTGCTCGGCGCGCCGCGCGTCGTGCCGGCTGCCGCCGCGCCGGAGCCGGGCGAGGGCGGC ACGGCCACGGCGCTGCCGGCCATCGCGGTCGGCGCCAGGCGCCCGGGCGGCGCGGCCGGCGCTGCCGACCTGAGCACGCC GGTCGCCGCCGGCAGCCGGCTCGGGCTGGCGAGCCTCGACACGCCGGCCAGCGTCGAGACGCTCGACGGCGCGCGCCTGC GCGAGCGCGGCGACACCACCGTCACGCAGGCCGTCACGCGCGCGGCCGGCTTCGCGGCCGAGGCGGCCCCCGGCAACGGC GGCACGGCCGTCTCGGTGCGCGGCTTCGGCGGCCCCGAGTCGGTCACCACGCTCTACGACGGCACGCGCATGCTGGTGGG CGCGGGCACCGTGACGTTTCCGGCCGACACCTGGTCGGTCGAGCGCATCGAGGTGCTGCGCGGGCCGGCCTCGGTGCTGT ACGGCGAGGGTGGACTGGGCGGCGTGATCAACGTGGTGCCGAAAGTGCCGCGGCGCGAGCGCTCGACCACGCTGCTGGCC GGCGCCGGCGCCTATGGGGAGCGGCGCGTGGCGCTCGACGCCACCGGCGCGCTCGCTCCGATGCTGTCGTACCGCTTCTA CGTGAACGATGACCGCCAGCACGGCTGGCTGCCGCGCGGCGGGTCGCACATGACCTCGGTGGGCGGCGCGCTCAAGCTCG ACCCGAGCCCGTCGCTGTCGTTCACGCTCGACTACGACTTCGCGCGCCACAAGCCGATGGCCAACTTCGGCGTGCCGGTC GCGCATGGCGTGCTCGACACCGCGCTCGCGCGGCAGAACTACAACGTCGGCAACGCGTCGATCGCCTATTACGACCGCTG GGCGCGCCTGAACACGACCTGGCGCGCGAGGCCGGGCATCACGCTGCGCAACCGGCTCTACGCGATGCTGACCGACCGTC ACTGGCGCGACTCGGAAAGCTACGCGCTGCAGGCCGACGGCAGCGTGCTGCGCAGCGACTACATCGAGATCCTGCACCAC CAGCGGCAGTTGGGCGACCGGCTCGACGCGAGCTTCGACGGCCGCCTGCTGGGCCGCCAGAACCGGCTCGTGGTGGGCGC CGAGTTCAACGACGTGAGCTTCGCGGACAGCAGCAACTCGCCGTTCGGCGGCCAGTCGGTGGTGCCCGCGCTCGGCTTCG ACCCGGGCCTGTTCTCGAGCCCCGATCCCACCGTGCCGGCGTTTCGCACGCATACGCACCAGGCCGGCGTGTTCGCCGAG GACCGCCTCGAGCTGACCCGGCGGCTCGCGTGGATCGCGGGCCTGCGCTACGACCATATCGACTATCGGCGCGACAGCTT CGCGACGCGGGCCGCCGGCGCCGCCTCGTTCGACAAGACCTTCGCGCACACCAGCTGGCGCACCGGCCTCGTGTTCTCGC TCACGCCCGAGCTCGCGCTGTATGGCCAGTACACCACCGGCACCGACGGGGTGGGCTCGCTGATCACGCTGTCGAAGTCG AGCAGCGCGTTCACGCTGTCGACCGGCGACCAATGGGAGGCCGGCATGAAACAGGCGTTCGCCGGCGGACGCGGTTCGTG GACGCTCGCGTTCTACCAGATCGTCAAGCGCAACCTGCTCACCGCCGATCCGCAGCACCCGGACCAGACCATCCAGGTCG GCCGGCAATCGTCGCGCGGCGTGGAGTGGACGGGCGCGCTGCGGCTCGGCGGCGGCTGGTCGATCGATGCCAACGCCGCG TTCCTGCGCGCGCGCTACGATGCGTTCGACGAGTCGGTGGGCGGCGCGAGCGTCTCGCGCAGCGGCAAGGTGCCGATCAA CATTCCCCGGCAGACCGCCAACCTCTGGGTGGACTGGGCCTTCGCGCCGGGCTGGCGCGCGGGCGCGGGGCTGCGCTACG TGGGCTCGAGCTACGGCGACACCGCCAACACGGTGCGGATTGCGTCGTATACGCTGCTCGACGCGTCCGCCTCGTGGCGC GCCTGGAGGAACCTGACCTTGTCGCTCTACCTGCACAACCTGAGCAACCGCATCTACACGGAAACCAGCCAGAACGACGG CGGCGAGTGGCTGCTCGGCGCGCCGCGCTCGGGCGGCGTGACCGCCACCGTCACGTTCTGA
Upstream 100 bases:
>100_bases GCCCGCATCCGAGCGTCGGGCGCGGGCCGTCCGACCGATTGCCGACCGATTGTCGACCGATTTCCGGCGGCATATGCCGG CCCGATGTGCGTCCGGGCCC
Downstream 100 bases:
>100_bases GCCGCCCGCGATGAGCCGCCTGCAGATCACCGAACTCGACTGGACCCCTGCCGCGCGCCGTGCCCGCGCGCTGTTGCGGC GCGTGACGCTCGACGCGCGG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 766; Mature: 765
Protein sequence:
>766_residues MPARSGPTGRARRRARDRPPLLAAHPGNPHSTHDMTYRPTAFRPPSARRRACAGMVAVASLLGAPRVVPAAAAPEPGEGG TATALPAIAVGARRPGGAAGAADLSTPVAAGSRLGLASLDTPASVETLDGARLRERGDTTVTQAVTRAAGFAAEAAPGNG GTAVSVRGFGGPESVTTLYDGTRMLVGAGTVTFPADTWSVERIEVLRGPASVLYGEGGLGGVINVVPKVPRRERSTTLLA GAGAYGERRVALDATGALAPMLSYRFYVNDDRQHGWLPRGGSHMTSVGGALKLDPSPSLSFTLDYDFARHKPMANFGVPV AHGVLDTALARQNYNVGNASIAYYDRWARLNTTWRARPGITLRNRLYAMLTDRHWRDSESYALQADGSVLRSDYIEILHH QRQLGDRLDASFDGRLLGRQNRLVVGAEFNDVSFADSSNSPFGGQSVVPALGFDPGLFSSPDPTVPAFRTHTHQAGVFAE DRLELTRRLAWIAGLRYDHIDYRRDSFATRAAGAASFDKTFAHTSWRTGLVFSLTPELALYGQYTTGTDGVGSLITLSKS SSAFTLSTGDQWEAGMKQAFAGGRGSWTLAFYQIVKRNLLTADPQHPDQTIQVGRQSSRGVEWTGALRLGGGWSIDANAA FLRARYDAFDESVGGASVSRSGKVPINIPRQTANLWVDWAFAPGWRAGAGLRYVGSSYGDTANTVRIASYTLLDASASWR AWRNLTLSLYLHNLSNRIYTETSQNDGGEWLLGAPRSGGVTATVTF
Sequences:
>Translated_766_residues MPARSGPTGRARRRARDRPPLLAAHPGNPHSTHDMTYRPTAFRPPSARRRACAGMVAVASLLGAPRVVPAAAAPEPGEGG TATALPAIAVGARRPGGAAGAADLSTPVAAGSRLGLASLDTPASVETLDGARLRERGDTTVTQAVTRAAGFAAEAAPGNG GTAVSVRGFGGPESVTTLYDGTRMLVGAGTVTFPADTWSVERIEVLRGPASVLYGEGGLGGVINVVPKVPRRERSTTLLA GAGAYGERRVALDATGALAPMLSYRFYVNDDRQHGWLPRGGSHMTSVGGALKLDPSPSLSFTLDYDFARHKPMANFGVPV AHGVLDTALARQNYNVGNASIAYYDRWARLNTTWRARPGITLRNRLYAMLTDRHWRDSESYALQADGSVLRSDYIEILHH QRQLGDRLDASFDGRLLGRQNRLVVGAEFNDVSFADSSNSPFGGQSVVPALGFDPGLFSSPDPTVPAFRTHTHQAGVFAE DRLELTRRLAWIAGLRYDHIDYRRDSFATRAAGAASFDKTFAHTSWRTGLVFSLTPELALYGQYTTGTDGVGSLITLSKS SSAFTLSTGDQWEAGMKQAFAGGRGSWTLAFYQIVKRNLLTADPQHPDQTIQVGRQSSRGVEWTGALRLGGGWSIDANAA FLRARYDAFDESVGGASVSRSGKVPINIPRQTANLWVDWAFAPGWRAGAGLRYVGSSYGDTANTVRIASYTLLDASASWR AWRNLTLSLYLHNLSNRIYTETSQNDGGEWLLGAPRSGGVTATVTF >Mature_765_residues PARSGPTGRARRRARDRPPLLAAHPGNPHSTHDMTYRPTAFRPPSARRRACAGMVAVASLLGAPRVVPAAAAPEPGEGGT ATALPAIAVGARRPGGAAGAADLSTPVAAGSRLGLASLDTPASVETLDGARLRERGDTTVTQAVTRAAGFAAEAAPGNGG TAVSVRGFGGPESVTTLYDGTRMLVGAGTVTFPADTWSVERIEVLRGPASVLYGEGGLGGVINVVPKVPRRERSTTLLAG AGAYGERRVALDATGALAPMLSYRFYVNDDRQHGWLPRGGSHMTSVGGALKLDPSPSLSFTLDYDFARHKPMANFGVPVA HGVLDTALARQNYNVGNASIAYYDRWARLNTTWRARPGITLRNRLYAMLTDRHWRDSESYALQADGSVLRSDYIEILHHQ RQLGDRLDASFDGRLLGRQNRLVVGAEFNDVSFADSSNSPFGGQSVVPALGFDPGLFSSPDPTVPAFRTHTHQAGVFAED RLELTRRLAWIAGLRYDHIDYRRDSFATRAAGAASFDKTFAHTSWRTGLVFSLTPELALYGQYTTGTDGVGSLITLSKSS SAFTLSTGDQWEAGMKQAFAGGRGSWTLAFYQIVKRNLLTADPQHPDQTIQVGRQSSRGVEWTGALRLGGGWSIDANAAF LRARYDAFDESVGGASVSRSGKVPINIPRQTANLWVDWAFAPGWRAGAGLRYVGSSYGDTANTVRIASYTLLDASASWRA WRNLTLSLYLHNLSNRIYTETSQNDGGEWLLGAPRSGGVTATVTF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=794, Percent_Identity=24.5591939546599, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1787344, Length=773, Percent_Identity=23.9327296248383, Blast_Score=94, Evalue=5e-20, Organism=Escherichia coli, GI1787723, Length=185, Percent_Identity=30.2702702702703, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81851; Mature: 81720
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARSGPTGRARRRARDRPPLLAAHPGNPHSTHDMTYRPTAFRPPSARRRACAGMVAVAS CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH LLGAPRVVPAAAAPEPGEGGTATALPAIAVGARRPGGAAGAADLSTPVAAGSRLGLASLD HHCCCCEECCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECC TPASVETLDGARLRERGDTTVTQAVTRAAGFAAEAAPGNGGTAVSVRGFGGPESVTTLYD CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEC GTRMLVGAGTVTFPADTWSVERIEVLRGPASVLYGEGGLGGVINVVPKVPRRERSTTLLA CCEEEEECCEEEECCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEE GAGAYGERRVALDATGALAPMLSYRFYVNDDRQHGWLPRGGSHMTSVGGALKLDPSPSLS ECCCCCCEEEEEECCCHHHHHHEEEEEEECCCCCCCCCCCCCCHHHCCCEEEECCCCCEE FTLDYDFARHKPMANFGVPVAHGVLDTALARQNYNVGNASIAYYDRWARLNTTWRARPGI EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCEECCCCC TLRNRLYAMLTDRHWRDSESYALQADGSVLRSDYIEILHHQRQLGDRLDASFDGRLLGRQ CHHHHEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC NRLVVGAEFNDVSFADSSNSPFGGQSVVPALGFDPGLFSSPDPTVPAFRTHTHQAGVFAE CCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHH DRLELTRRLAWIAGLRYDHIDYRRDSFATRAAGAASFDKTFAHTSWRTGLVFSLTPELAL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCEEE YGQYTTGTDGVGSLITLSKSSSAFTLSTGDQWEAGMKQAFAGGRGSWTLAFYQIVKRNLL EEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHC TADPQHPDQTIQVGRQSSRGVEWTGALRLGGGWSIDANAAFLRARYDAFDESVGGASVSR CCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHHHHCCCCCCCCC SGKVPINIPRQTANLWVDWAFAPGWRAGAGLRYVGSSYGDTANTVRIASYTLLDASASWR CCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCCCH AWRNLTLSLYLHNLSNRIYTETSQNDGGEWLLGAPRSGGVTATVTF HHHCCEEEEEEEHHCCCEEEECCCCCCCCEEEECCCCCCEEEEEEC >Mature Secondary Structure PARSGPTGRARRRARDRPPLLAAHPGNPHSTHDMTYRPTAFRPPSARRRACAGMVAVAS CCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH LLGAPRVVPAAAAPEPGEGGTATALPAIAVGARRPGGAAGAADLSTPVAAGSRLGLASLD HHCCCCEECCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEECC TPASVETLDGARLRERGDTTVTQAVTRAAGFAAEAAPGNGGTAVSVRGFGGPESVTTLYD CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEC GTRMLVGAGTVTFPADTWSVERIEVLRGPASVLYGEGGLGGVINVVPKVPRRERSTTLLA CCEEEEECCEEEECCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEE GAGAYGERRVALDATGALAPMLSYRFYVNDDRQHGWLPRGGSHMTSVGGALKLDPSPSLS ECCCCCCEEEEEECCCHHHHHHEEEEEEECCCCCCCCCCCCCCHHHCCCEEEECCCCCEE FTLDYDFARHKPMANFGVPVAHGVLDTALARQNYNVGNASIAYYDRWARLNTTWRARPGI EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCEECCCCC TLRNRLYAMLTDRHWRDSESYALQADGSVLRSDYIEILHHQRQLGDRLDASFDGRLLGRQ CHHHHEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC NRLVVGAEFNDVSFADSSNSPFGGQSVVPALGFDPGLFSSPDPTVPAFRTHTHQAGVFAE CCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHH DRLELTRRLAWIAGLRYDHIDYRRDSFATRAAGAASFDKTFAHTSWRTGLVFSLTPELAL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCEEE YGQYTTGTDGVGSLITLSKSSSAFTLSTGDQWEAGMKQAFAGGRGSWTLAFYQIVKRNLL EEECCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHC TADPQHPDQTIQVGRQSSRGVEWTGALRLGGGWSIDANAAFLRARYDAFDESVGGASVSR CCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHHHHCCCCCCCCC SGKVPINIPRQTANLWVDWAFAPGWRAGAGLRYVGSSYGDTANTVRIASYTLLDASASWR CCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCCCH AWRNLTLSLYLHNLSNRIYTETSQNDGGEWLLGAPRSGGVTATVTF HHHCCEEEEEEEHHCCCEEEECCCCCCCCEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]