| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ybzH [H]
Identifier: 238024824
GI number: 238024824
Start: 1861307
End: 1861612
Strand: Direct
Name: ybzH [H]
Synonym: bglu_2g14620
Alternate gene names: 238024824
Gene position: 1861307-1861612 (Clockwise)
Preceding gene: 238024821
Following gene: 238024825
Centisome position: 65.83
GC content: 65.69
Gene sequence:
>306_bases ATGACGCTCGACATCGACGCGATCCACAAGGCGCTCGCGAATCCGGTCCGCCGCGACATCCTGCTCTGGCTCAAGGAGCC CCACCGGCATTTTCCGGAGCAGGCCCACCTGCCGCTGCAGGAAGGCGTCTGCGCGGGCCAGATCGACGCGCGCTGCGGCC TGTCTCAATCGACCGTGTCGGCCCACCTCGCGACGCTGCAGCGCGCGGGGTTGGTGCAGTCATCGCGGTTGGGCCAGTGG GTGTTTTTCCGGCGCAACGAGACGGTGATCCGGGCGTTTCTCGATCAGTTGCACACCAAACTTTGA
Upstream 100 bases:
>100_bases CGCCATGCACCAGGGTTATTTTTATATATCGCGATATCACGATATATACTTCGTTCCACGACGATACAAGCGGAGCGCAT TGCGCCCTCGCCTTTCATCC
Downstream 100 bases:
>100_bases CGGCGTTGCCAAGCCGACCGGTGTCCGCACAACGGCTCGTTCGGCGTCTTCGATTTCGATAGATAAGGAATCCTTCATGC CTACCCTCTTTGATCCGCTA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTLDIDAIHKALANPVRRDILLWLKEPHRHFPEQAHLPLQEGVCAGQIDARCGLSQSTVSAHLATLQRAGLVQSSRLGQW VFFRRNETVIRAFLDQLHTKL
Sequences:
>Translated_101_residues MTLDIDAIHKALANPVRRDILLWLKEPHRHFPEQAHLPLQEGVCAGQIDARCGLSQSTVSAHLATLQRAGLVQSSRLGQW VFFRRNETVIRAFLDQLHTKL >Mature_100_residues TLDIDAIHKALANPVRRDILLWLKEPHRHFPEQAHLPLQEGVCAGQIDARCGLSQSTVSAHLATLQRAGLVQSSRLGQWV FFRRNETVIRAFLDQLHTKL
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 11458; Mature: 11327
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDIDAIHKALANPVRRDILLWLKEPHRHFPEQAHLPLQEGVCAGQIDARCGLSQSTVS CCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHH AHLATLQRAGLVQSSRLGQWVFFRRNETVIRAFLDQLHTKL HHHHHHHHHCCHHCCCCCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure TLDIDAIHKALANPVRRDILLWLKEPHRHFPEQAHLPLQEGVCAGQIDARCGLSQSTVS CCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHH AHLATLQRAGLVQSSRLGQWVFFRRNETVIRAFLDQLHTKL HHHHHHHHHCCHHCCCCCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]