| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024818
Identifier: 238024818
GI number: 238024818
Start: 1855641
End: 1856117
Strand: Direct
Name: 238024818
Synonym: bglu_2g14560
Alternate gene names: NA
Gene position: 1855641-1856117 (Clockwise)
Preceding gene: 238024815
Following gene: 238024821
Centisome position: 65.63
GC content: 61.84
Gene sequence:
>477_bases ATGAAAAAACGGAACGCTCCGAATGAGTCGCCGCTGCCACCGGATCTCTACGAGGAGCCTGGTCATTTGATCCGCCGCGC CCATCAGATCGCGGTTGCCATGTTCTACGAAAAGCTGGGGCGCGACGTTACACCGGTGCAGTACGCCGTCCTGCGCATGC TCGACGAGTGCCCCGGCCTGGATCAGGTCACGCTCGCGCAAAAGGTGGCGCTCGACACCTCGACCACCGCCGACATCGCC GCACGCCTGGAGAGCAAGGGGTGGATCGTGCGTGAGCTGCTGCCGAGGCGGCAGCGTCGCCTTCTGCTCACCCCTGAGGG CAAGGCCTTGATTGCCACGCTCATGCCGTTGGTGCGCGACCTGAAGAACACGCTCTTCGAAGAGATGGAGGAAGAGGACG CGCGCGATCTGATGCGTCTGCTGAGCAAGTTCGTTCATTTGAACAACGAACAAAGCCGAGCCCCGCTCAAACCGTGA
Upstream 100 bases:
>100_bases ATCGCCAGAGGGATCAACAAGGAGCGCGGTATACTGGTTTTCCCTCAACGCAGAGCCTATTGCAAGCAACCCGGCCAAAC AGGCACTACTCGTCCTTGCC
Downstream 100 bases:
>100_bases GGTGCTTCATGCCGTGATATGGCGGAGGGCCGTGCGAGGCAACGACGTACCTTTCCGCGGCGTTCGGGCAGCGGCCCGTG TGCTCGACCGGGGCACGAGT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator MarR Family; Regulatory Protein MarR; MarR Family Transcription Regulator Protein; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKKRNAPNESPLPPDLYEEPGHLIRRAHQIAVAMFYEKLGRDVTPVQYAVLRMLDECPGLDQVTLAQKVALDTSTTADIA ARLESKGWIVRELLPRRQRRLLLTPEGKALIATLMPLVRDLKNTLFEEMEEEDARDLMRLLSKFVHLNNEQSRAPLKP
Sequences:
>Translated_158_residues MKKRNAPNESPLPPDLYEEPGHLIRRAHQIAVAMFYEKLGRDVTPVQYAVLRMLDECPGLDQVTLAQKVALDTSTTADIA ARLESKGWIVRELLPRRQRRLLLTPEGKALIATLMPLVRDLKNTLFEEMEEEDARDLMRLLSKFVHLNNEQSRAPLKP >Mature_158_residues MKKRNAPNESPLPPDLYEEPGHLIRRAHQIAVAMFYEKLGRDVTPVQYAVLRMLDECPGLDQVTLAQKVALDTSTTADIA ARLESKGWIVRELLPRRQRRLLLTPEGKALIATLMPLVRDLKNTLFEEMEEEDARDLMRLLSKFVHLNNEQSRAPLKP
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18093; Mature: 18093
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRNAPNESPLPPDLYEEPGHLIRRAHQIAVAMFYEKLGRDVTPVQYAVLRMLDECPGL CCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DQVTLAQKVALDTSTTADIAARLESKGWIVRELLPRRQRRLLLTPEGKALIATLMPLVRD CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHH LKNTLFEEMEEEDARDLMRLLSKFVHLNNEQSRAPLKP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKRNAPNESPLPPDLYEEPGHLIRRAHQIAVAMFYEKLGRDVTPVQYAVLRMLDECPGL CCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DQVTLAQKVALDTSTTADIAARLESKGWIVRELLPRRQRRLLLTPEGKALIATLMPLVRD CHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCEECCCCCHHHHHHHHHHHHH LKNTLFEEMEEEDARDLMRLLSKFVHLNNEQSRAPLKP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA