| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is vanA [H]
Identifier: 238024817
GI number: 238024817
Start: 1854375
End: 1855454
Strand: Reverse
Name: vanA [H]
Synonym: bglu_2g14550
Alternate gene names: 238024817
Gene position: 1855454-1854375 (Counterclockwise)
Preceding gene: 238024819
Following gene: 238024816
Centisome position: 65.63
GC content: 63.52
Gene sequence:
>1080_bases ATGTTTTTGAAGAATGCGTGGTACGTGGCGTGCACGCCCGATGAGATTGAAACCGGGCCGCTCGGTCGCAAGATCTGCGG CGAATCGATCGTGTTTTTCCGAGGCGAGCGCGGCGAGGTGGTTGCGCTCGAGGATTTCTGTCCCCACCGTGGCGCGCCGC TTTCACTCGGCTTTGTCCGTGACGGACGGCTCGTGTGCGGCTATCACGGGCTCGAGATGGGTTGCGACGGGAAGGTGGCA GGGATGCCCGGTCAGCGGGTGGGAGGCTTTCCGGCAGCCCGGCGTTATGCTGCGGTCGAACGCAGCGGATTCATCTGGGT ATGGCCCGGCGACGCATCGCATGCGGACCCCGCCCGGCTCCATCACTTGCCATGGGCCGAAGATCCGGCGTGGGCATACG GTGGCGGGCTGTACCACATTCACTGCGACTACCGGCTGATGATCGACAATCTGATGGACCTGACGCACGAAACGTATGTC CATGCGAGCAGTATCGGCCAGAAAGAGATCGACGAGGCGCCGCCCAAAACCGTCAGCCGGGGCGACGAGGTCATCACCAG CCGTTTCATGCACAACATCGGCGCACCACCTTTCTGGAAGATGGCGCTGCGCGGCAATGGCCTTGCGGACGACGTGCCCG TCGATCGCTGGCAAATCTGCCGCTTCACGCCGCCGAGCCACGTCATGATCGAGGTCGGCGTCGCGCACGCCGGCAATGGC GGCTACGATGCGCCGGCCGAACTCAAGGCGTCGTCAATCGTCGTCGATTTCATTACACCCGAGACGGAAACCTCGATCTG GTATTTCTGGGGCATGGCGCGTAATTTCCGGCCGGACGACGCCGAACTGACCGCGCAGATCCGGGAGGGCCAGGGCAAGA TCTTCGCCGAGGATCTCGAGATGCTGGAGCGCCAGCAGCAGAACCTGCTGGCCTGGCCGGATCGTCAATTGCTGAAGCTC AATATCGATGCGGGCGGCGTTCTCTCCCGCAAGGTCATCGACCGCCTGCTGGCAGAGGAGCGTGCATTGCCCGCCGGACG TCCGGTGGTGCCGATCGTGCCGACCAGGGAGGCATCGTGA
Upstream 100 bases:
>100_bases ATCCCTCTGGCGATGAGTACACTGAATCATATTCAGTGTACTGAATTTAATGATCGCATGGCAGGCGTGCAGGACCGACT AGCACGGACAGGAGACGGAG
Downstream 100 bases:
>100_bases GCGAGGCGACGTTGATCGTCGAGGTCGTGCGCAAATGGGACGAGGCACGCGGCATCTGCGGTTTCGAACTGAGGCGCCCG GACCGTGCGCCGCTGCCCGG
Product: Vanillate monooxygenase
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS
Sequences:
>Translated_359_residues MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS >Mature_359_residues MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 39841; Mature: 39841
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00570 RING_HYDROXYL_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVR CCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEE DGRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARL CCCEEEEECCCEECCCCCEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCHHHH HHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTVSR CCCCCCCCCCEEECCCEEEEEECCEEEHHHHHHHHHHHEEEHHHCCHHHHHCCCCHHHCC GDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLE CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHHH MLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC >Mature Secondary Structure MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVR CCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEE DGRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARL CCCEEEEECCCEECCCCCEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCHHHH HHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTVSR CCCCCCCCCCEEECCCEEEEEECCEEEHHHHHHHHHHHEEEHHHCCHHHHHCCCCHHHCC GDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLE CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHHH MLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]