Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is vanA [H]

Identifier: 238024817

GI number: 238024817

Start: 1854375

End: 1855454

Strand: Reverse

Name: vanA [H]

Synonym: bglu_2g14550

Alternate gene names: 238024817

Gene position: 1855454-1854375 (Counterclockwise)

Preceding gene: 238024819

Following gene: 238024816

Centisome position: 65.63

GC content: 63.52

Gene sequence:

>1080_bases
ATGTTTTTGAAGAATGCGTGGTACGTGGCGTGCACGCCCGATGAGATTGAAACCGGGCCGCTCGGTCGCAAGATCTGCGG
CGAATCGATCGTGTTTTTCCGAGGCGAGCGCGGCGAGGTGGTTGCGCTCGAGGATTTCTGTCCCCACCGTGGCGCGCCGC
TTTCACTCGGCTTTGTCCGTGACGGACGGCTCGTGTGCGGCTATCACGGGCTCGAGATGGGTTGCGACGGGAAGGTGGCA
GGGATGCCCGGTCAGCGGGTGGGAGGCTTTCCGGCAGCCCGGCGTTATGCTGCGGTCGAACGCAGCGGATTCATCTGGGT
ATGGCCCGGCGACGCATCGCATGCGGACCCCGCCCGGCTCCATCACTTGCCATGGGCCGAAGATCCGGCGTGGGCATACG
GTGGCGGGCTGTACCACATTCACTGCGACTACCGGCTGATGATCGACAATCTGATGGACCTGACGCACGAAACGTATGTC
CATGCGAGCAGTATCGGCCAGAAAGAGATCGACGAGGCGCCGCCCAAAACCGTCAGCCGGGGCGACGAGGTCATCACCAG
CCGTTTCATGCACAACATCGGCGCACCACCTTTCTGGAAGATGGCGCTGCGCGGCAATGGCCTTGCGGACGACGTGCCCG
TCGATCGCTGGCAAATCTGCCGCTTCACGCCGCCGAGCCACGTCATGATCGAGGTCGGCGTCGCGCACGCCGGCAATGGC
GGCTACGATGCGCCGGCCGAACTCAAGGCGTCGTCAATCGTCGTCGATTTCATTACACCCGAGACGGAAACCTCGATCTG
GTATTTCTGGGGCATGGCGCGTAATTTCCGGCCGGACGACGCCGAACTGACCGCGCAGATCCGGGAGGGCCAGGGCAAGA
TCTTCGCCGAGGATCTCGAGATGCTGGAGCGCCAGCAGCAGAACCTGCTGGCCTGGCCGGATCGTCAATTGCTGAAGCTC
AATATCGATGCGGGCGGCGTTCTCTCCCGCAAGGTCATCGACCGCCTGCTGGCAGAGGAGCGTGCATTGCCCGCCGGACG
TCCGGTGGTGCCGATCGTGCCGACCAGGGAGGCATCGTGA

Upstream 100 bases:

>100_bases
ATCCCTCTGGCGATGAGTACACTGAATCATATTCAGTGTACTGAATTTAATGATCGCATGGCAGGCGTGCAGGACCGACT
AGCACGGACAGGAGACGGAG

Downstream 100 bases:

>100_bases
GCGAGGCGACGTTGATCGTCGAGGTCGTGCGCAAATGGGACGAGGCACGCGGCATCTGCGGTTTCGAACTGAGGCGCCCG
GACCGTGCGCCGCTGCCCGG

Product: Vanillate monooxygenase

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA
GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV
HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG
GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL
NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS

Sequences:

>Translated_359_residues
MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA
GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV
HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG
GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL
NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS
>Mature_359_residues
MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRDGRLVCGYHGLEMGCDGKVA
GMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLHHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYV
HASSIGQKEIDEAPPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG
GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLEMLERQQQNLLAWPDRQLLKL
NIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 39841; Mature: 39841

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVR
CCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEE
DGRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARL
CCCEEEEECCCEECCCCCEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCHHHH
HHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTVSR
CCCCCCCCCCEEECCCEEEEEECCEEEHHHHHHHHHHHEEEHHHCCHHHHHCCCCHHHCC
GDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLE
CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHHH
MLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS
HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MFLKNAWYVACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVR
CCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEE
DGRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARL
CCCEEEEECCCEECCCCCEECCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCHHHH
HHLPWAEDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTVSR
CCCCCCCCCCEEECCCEEEEEECCEEEHHHHHHHHHHHEEEHHHCCHHHHHCCCCHHHCC
GDEVITSRFMHNIGAPPFWKMALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGNG
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC
GYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQIREGQGKIFAEDLE
CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEHHHHH
MLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERALPAGRPVVPIVPTREAS
HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9098058 [H]