Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is bcpC [H]
Identifier: 238024710
GI number: 238024710
Start: 1728483
End: 1729634
Strand: Direct
Name: bcpC [H]
Synonym: bglu_2g13470
Alternate gene names: 238024710
Gene position: 1728483-1729634 (Clockwise)
Preceding gene: 238024709
Following gene: 238024711
Centisome position: 61.13
GC content: 72.14
Gene sequence:
>1152_bases ATGATCGAGGCGGCACAGTTCGTCGAGGCCGCGCGCGAGCGCGGCTTCGACTGGTATGCGGGCGTGCCCTGCTCGTACCT GACGCCGTTCATCAACTACGTGCTGCAGGACCCGGCGCTGCACTACGTGTCGGCCGCCAACGAGGGCGACGCGGTCGCCA TCGTGGCGGGCGCGACGCTCGGCGGCAAGCGCGGCATCGCGATGATGCAGAACTCCGGGCTCGGCAACGCGGTCAGCCCG CTCACCTCGCTGACCTGGACGTTCCGGCTGCCGCAGTTGCTGATCGTCACCTGGCGCGGCAAGCCCGGTGAGCACGACGA GCCGCAGCACGCGCTGATGGGGCCGATCACGCCGCAGATGCTCGACACCATGGAGATCCCGTGGGAGCAGTTCCCGACCG AGGCCGAGCAGATCGCCCCGGCGCTGGACCGCGCGATCCGCCACATGGACGAGACCGGCCGCCCCTACGCGCTGGTGATG CAGAAAGGCAGCGTCGCGCCATATCCGCTGAAGGACGCGCCGATGCCCGCGCCGCGCCCGCAGGCAGCGCCGCTCTCGAC GCGCGCCGCCGCGGCCGAGCTGCCGACGCGCCACGCCGCGCTGGCCGCCGTGATCGCGCGCACCCCGCTCGATTCGACCG TGGTGCTGGCCTCCACCGGTTTTTGCGGACGTGAGCTGTACGCGCTCGACGATCGCGCCAACCAGCTCTACATGGTCGGC TCGATGGGCTGCGTGACGCCGCTCGCGCTCGGTCTCGCGCTGGCACGCCCCGACCTGACCGTGGTGGCCGTGGACGGCGA CGGCGCCGCGCTGATGCGCATGGGCGCGTTTGCGACGCTCGGCGCCTACGGGCCGAAGAATCTGGTCCACGTGCTGCTCG ACAACGGTGCGCACGAATCGACGGGGGGCCAGTCCACCGTCTCGCCGTGCGTGTCGTTCGCGGGCGTGGCGGCAGCCTGC GGCTACGCGTTCGCGCGCGAGGGCGGCGATCTCGGCGTGCTCGACGCCGTGTTCGCCGAGCCCGCCGACGGCGTGCGCTT CGCCGGCGTGGCGATCCGCACCGGCGTGCCCGAAGGCCTGCCGCGCCCGAGCGTCACCCCGGTCGAGGTGAAGACTCGTC TGATGCGCCACATCGGCGCGGGAGCCCAATGA
Upstream 100 bases:
>100_bases ACTGGCGCGGCGTGAACGACCTCGACGAATTCCGCCGCGCAGGCGACTTCGCGCACGGCCAGACGCCGCTCGCGAGCGGC ACGGCCGACGGGGACGCGCA
Downstream 100 bases:
>100_bases TGCTGCTGCTGAATCCCGGCCCGGTCACGCTGACCGAGCGCGTCCGCCAAAGCCTGCTGCAAACCGACCTCTGCCACCGC GAAAGCGAGTTCTTCGACCT
Product: 3-phosphonopyruvate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MIEAAQFVEAARERGFDWYAGVPCSYLTPFINYVLQDPALHYVSAANEGDAVAIVAGATLGGKRGIAMMQNSGLGNAVSP LTSLTWTFRLPQLLIVTWRGKPGEHDEPQHALMGPITPQMLDTMEIPWEQFPTEAEQIAPALDRAIRHMDETGRPYALVM QKGSVAPYPLKDAPMPAPRPQAAPLSTRAAAAELPTRHAALAAVIARTPLDSTVVLASTGFCGRELYALDDRANQLYMVG SMGCVTPLALGLALARPDLTVVAVDGDGAALMRMGAFATLGAYGPKNLVHVLLDNGAHESTGGQSTVSPCVSFAGVAAAC GYAFAREGGDLGVLDAVFAEPADGVRFAGVAIRTGVPEGLPRPSVTPVEVKTRLMRHIGAGAQ
Sequences:
>Translated_383_residues MIEAAQFVEAARERGFDWYAGVPCSYLTPFINYVLQDPALHYVSAANEGDAVAIVAGATLGGKRGIAMMQNSGLGNAVSP LTSLTWTFRLPQLLIVTWRGKPGEHDEPQHALMGPITPQMLDTMEIPWEQFPTEAEQIAPALDRAIRHMDETGRPYALVM QKGSVAPYPLKDAPMPAPRPQAAPLSTRAAAAELPTRHAALAAVIARTPLDSTVVLASTGFCGRELYALDDRANQLYMVG SMGCVTPLALGLALARPDLTVVAVDGDGAALMRMGAFATLGAYGPKNLVHVLLDNGAHESTGGQSTVSPCVSFAGVAAAC GYAFAREGGDLGVLDAVFAEPADGVRFAGVAIRTGVPEGLPRPSVTPVEVKTRLMRHIGAGAQ >Mature_383_residues MIEAAQFVEAARERGFDWYAGVPCSYLTPFINYVLQDPALHYVSAANEGDAVAIVAGATLGGKRGIAMMQNSGLGNAVSP LTSLTWTFRLPQLLIVTWRGKPGEHDEPQHALMGPITPQMLDTMEIPWEQFPTEAEQIAPALDRAIRHMDETGRPYALVM QKGSVAPYPLKDAPMPAPRPQAAPLSTRAAAAELPTRHAALAAVIARTPLDSTVVLASTGFCGRELYALDDRANQLYMVG SMGCVTPLALGLALARPDLTVVAVDGDGAALMRMGAFATLGAYGPKNLVHVLLDNGAHESTGGQSTVSPCVSFAGVAAAC GYAFAREGGDLGVLDAVFAEPADGVRFAGVAIRTGVPEGLPRPSVTPVEVKTRLMRHIGAGAQ
Specific function: Unknown
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017684 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF02776 TPP_enzyme_N [H]
EC number: =4.1.1.82 [H]
Molecular weight: Translated: 40222; Mature: 40222
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAAQFVEAARERGFDWYAGVPCSYLTPFINYVLQDPALHYVSAANEGDAVAIVAGATL CCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCEEEEEEECCC GGKRGIAMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGKPGEHDEPQHALMGPITPQM CCCCCEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCHHHCCCCCHHH LDTMEIPWEQFPTEAEQIAPALDRAIRHMDETGRPYALVMQKGSVAPYPLKDAPMPAPRP HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC QAAPLSTRAAAAELPTRHAALAAVIARTPLDSTVVLASTGFCGRELYALDDRANQLYMVG CCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEC SMGCVTPLALGLALARPDLTVVAVDGDGAALMRMGAFATLGAYGPKNLVHVLLDNGAHES CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCC TGGQSTVSPCVSFAGVAAACGYAFAREGGDLGVLDAVFAEPADGVRFAGVAIRTGVPEGL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCC PRPSVTPVEVKTRLMRHIGAGAQ CCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIEAAQFVEAARERGFDWYAGVPCSYLTPFINYVLQDPALHYVSAANEGDAVAIVAGATL CCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCEEEEEEECCC GGKRGIAMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGKPGEHDEPQHALMGPITPQM CCCCCEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCHHHCCCCCHHH LDTMEIPWEQFPTEAEQIAPALDRAIRHMDETGRPYALVMQKGSVAPYPLKDAPMPAPRP HHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC QAAPLSTRAAAAELPTRHAALAAVIARTPLDSTVVLASTGFCGRELYALDDRANQLYMVG CCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEC SMGCVTPLALGLALARPDLTVVAVDGDGAALMRMGAFATLGAYGPKNLVHVLLDNGAHES CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCC TGGQSTVSPCVSFAGVAAACGYAFAREGGDLGVLDAVFAEPADGVRFAGVAIRTGVPEGL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCC PRPSVTPVEVKTRLMRHIGAGAQ CCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10786631 [H]