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The map label for this gene is ynfJ [C]

Identifier: 238024654

GI number: 238024654

Start: 1635988

End: 1637271

Strand: Reverse

Name: ynfJ [C]

Synonym: bglu_2g12690

Alternate gene names: 238024654

Gene position: 1637271-1635988 (Counterclockwise)

Preceding gene: 238024655

Following gene: 238024652

Centisome position: 57.91

GC content: 73.99

Gene sequence:

>1284_bases
GTGCGCGACGGGGGCGCTGCCGCGGACACCGGCGCCGCCGCGATTCGTCCGCTCGTGCGTTTCGTGATCGTGACGCTGCT
GACGGGCGTGGGCGCCGGGCTCGGCGGCATGCTGCTGGCGCAGTTGCTGCACGCGATCCAGCACCTCGCCTATGGCTACA
GCCTGGCGCACGTGATCAGCGGCGAAACCTTTCTCGACGGCGTCTCGCATGCGGCGCCGCCGCGCCGCGTGGCGGTGCTG
GCGGCCTGCGGCCTGGTGGCCGGATTCGGCTGGTGGGCCGTGTATCGCTACGGCAAGCCGCTCGTCAGCATCAAGCGTGC
CGTGCAGGCCGCCGACCCGCGCATGCCGGTGGCGAGCACGCTGGCGCATGCGCTGCTGCAGATCGTGACGGTGGCGCTGG
GCTCGCCGCTCGGCCGCGAGGTGGCGCCGCGCGAGATCGGCGCGCTGTGGGCCGGCTGGATCGCGCATCGCGTCGGGCTG
CCGGCCGCGGACCAGCGGCTGATGGTGGCCTGCGGGGCCGGCGCGGGGCTCGCCGCGGTCTACAACGTACCGCTCGGCGG
TGCCGTGTTCGTGCTCGAGGTGCTGCTCGGCACGTTCGGCTGGCGCGCCGCGGCGCCGGCGCTGGTGACGTCGTCGATCG
CCGCCGTGGTGGCCTGGATCGGGCTCGGCAACGAGCACCAGTACACGCTCGCGCCGCTTGCGATCGATGCCTCGCTGGTG
GTGTGGGCCGCCGTCTGCGGGCCGCTGTTCGGTCTCGCGGCCTACGGCTTCACACGCCTTACCAGCGCCGCGCGCGTGCG
CGCGCCGAGGGACTGGCGGCTGCCGGTGCTGGCGGTGCTGAACTTCACCATCATCGGCGGCCTGTCGATCGCGCTGCCGG
CGCTGCTCGGCAACGGCAAGGGAACGGCCTCGCTCGGCTTCGACGGCGCGCTCACGGTGGGCATGGCCGCCGTGCTGCTG
GTGTTGAAGGTGGCCATCGAGTGGGGCAGCCTGCGGGCCGGCGCCGAGGGCGGACTGCTGACGCCGGGCCTGGCCAACGG
CGCGCTGCTGGCGATCGTGCTCGGCGGCGCGTGGCAGTTGGTCTGGCCGGGGGCGGCGCCCGGCGCGTTCGCCGTCGTCG
GCGCGGCGGCGTTCCTCGCCGCGTCGATGCAGATGCCGCTGACGGCGATCGTGCTGATCGCCGAGTTCACGCGCATCGGC
CACGACTTCCTGATCCCGATGCTGCTCGCGGTGGGCGGATCGATCGCCGCATACCGGCTGGTATCGCGGCGCGCGAGCCG
CTGA

Upstream 100 bases:

>100_bases
GCTCACCATGTCCTCGTCAGCCACTTCGACTGCTTCCACCGCCCCGGCATCCGCGCCGGGCCTGACCGCGCCGTTCGCGG
CATCGGCGCCAGCGGCTGCC

Downstream 100 bases:

>100_bases
GCGCCCGGGCGCCGGGCGCCGGGCGCGGCGGCAGCCGTCAGGCCAGGCTGCCGGTCGGCAGTTGCGGCTCGCGCGCCTCG
GCCGCGCCGGCGTGCGTCGT

Product: voltage gated Cl- channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRDGGAAADTGAAAIRPLVRFVIVTLLTGVGAGLGGMLLAQLLHAIQHLAYGYSLAHVISGETFLDGVSHAAPPRRVAVL
AACGLVAGFGWWAVYRYGKPLVSIKRAVQAADPRMPVASTLAHALLQIVTVALGSPLGREVAPREIGALWAGWIAHRVGL
PAADQRLMVACGAGAGLAAVYNVPLGGAVFVLEVLLGTFGWRAAAPALVTSSIAAVVAWIGLGNEHQYTLAPLAIDASLV
VWAAVCGPLFGLAAYGFTRLTSAARVRAPRDWRLPVLAVLNFTIIGGLSIALPALLGNGKGTASLGFDGALTVGMAAVLL
VLKVAIEWGSLRAGAEGGLLTPGLANGALLAIVLGGAWQLVWPGAAPGAFAVVGAAAFLAASMQMPLTAIVLIAEFTRIG
HDFLIPMLLAVGGSIAAYRLVSRRASR

Sequences:

>Translated_427_residues
MRDGGAAADTGAAAIRPLVRFVIVTLLTGVGAGLGGMLLAQLLHAIQHLAYGYSLAHVISGETFLDGVSHAAPPRRVAVL
AACGLVAGFGWWAVYRYGKPLVSIKRAVQAADPRMPVASTLAHALLQIVTVALGSPLGREVAPREIGALWAGWIAHRVGL
PAADQRLMVACGAGAGLAAVYNVPLGGAVFVLEVLLGTFGWRAAAPALVTSSIAAVVAWIGLGNEHQYTLAPLAIDASLV
VWAAVCGPLFGLAAYGFTRLTSAARVRAPRDWRLPVLAVLNFTIIGGLSIALPALLGNGKGTASLGFDGALTVGMAAVLL
VLKVAIEWGSLRAGAEGGLLTPGLANGALLAIVLGGAWQLVWPGAAPGAFAVVGAAAFLAASMQMPLTAIVLIAEFTRIG
HDFLIPMLLAVGGSIAAYRLVSRRASR
>Mature_427_residues
MRDGGAAADTGAAAIRPLVRFVIVTLLTGVGAGLGGMLLAQLLHAIQHLAYGYSLAHVISGETFLDGVSHAAPPRRVAVL
AACGLVAGFGWWAVYRYGKPLVSIKRAVQAADPRMPVASTLAHALLQIVTVALGSPLGREVAPREIGALWAGWIAHRVGL
PAADQRLMVACGAGAGLAAVYNVPLGGAVFVLEVLLGTFGWRAAAPALVTSSIAAVVAWIGLGNEHQYTLAPLAIDASLV
VWAAVCGPLFGLAAYGFTRLTSAARVRAPRDWRLPVLAVLNFTIIGGLSIALPALLGNGKGTASLGFDGALTVGMAAVLL
VLKVAIEWGSLRAGAEGGLLTPGLANGALLAIVLGGAWQLVWPGAAPGAFAVVGAAAFLAASMQMPLTAIVLIAEFTRIG
HDFLIPMLLAVGGSIAAYRLVSRRASR

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=363, Percent_Identity=28.099173553719, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 43541; Mature: 43541

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGGAAADTGAAAIRPLVRFVIVTLLTGVGAGLGGMLLAQLLHAIQHLAYGYSLAHVIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GETFLDGVSHAAPPRRVAVLAACGLVAGFGWWAVYRYGKPLVSIKRAVQAADPRMPVAST
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LAHALLQIVTVALGSPLGREVAPREIGALWAGWIAHRVGLPAADQRLMVACGAGAGLAAV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHE
YNVPLGGAVFVLEVLLGTFGWRAAAPALVTSSIAAVVAWIGLGNEHQYTLAPLAIDASLV
EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
VWAAVCGPLFGLAAYGFTRLTSAARVRAPRDWRLPVLAVLNFTIIGGLSIALPALLGNGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GTASLGFDGALTVGMAAVLLVLKVAIEWGSLRAGAEGGLLTPGLANGALLAIVLGGAWQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VWPGAAPGAFAVVGAAAFLAASMQMPLTAIVLIAEFTRIGHDFLIPMLLAVGGSIAAYRL
EECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VSRRASR
HHHHCCC
>Mature Secondary Structure
MRDGGAAADTGAAAIRPLVRFVIVTLLTGVGAGLGGMLLAQLLHAIQHLAYGYSLAHVIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GETFLDGVSHAAPPRRVAVLAACGLVAGFGWWAVYRYGKPLVSIKRAVQAADPRMPVAST
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LAHALLQIVTVALGSPLGREVAPREIGALWAGWIAHRVGLPAADQRLMVACGAGAGLAAV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHE
YNVPLGGAVFVLEVLLGTFGWRAAAPALVTSSIAAVVAWIGLGNEHQYTLAPLAIDASLV
EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
VWAAVCGPLFGLAAYGFTRLTSAARVRAPRDWRLPVLAVLNFTIIGGLSIALPALLGNGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GTASLGFDGALTVGMAAVLLVLKVAIEWGSLRAGAEGGLLTPGLANGALLAIVLGGAWQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VWPGAAPGAFAVVGAAAFLAASMQMPLTAIVLIAEFTRIGHDFLIPMLLAVGGSIAAYRL
EECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VSRRASR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]