Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024642
Identifier: 238024642
GI number: 238024642
Start: 1612168
End: 1612527
Strand: Direct
Name: 238024642
Synonym: bglu_2g12570
Alternate gene names: NA
Gene position: 1612168-1612527 (Clockwise)
Preceding gene: 238024641
Following gene: 238024643
Centisome position: 57.02
GC content: 69.72
Gene sequence:
>360_bases GTGTCAGCACTACCCACCCATGACGAGCTCGAGCAACTGCTCGGCCAGGTCCTGATCATCGCGACGGCCGACGACGCGGC CGAGCCGCTGACCCAGGCCCGCCTGCTGAGCGCGCCGCCGGGCCTGGCGATGGATGAAGACCATACCTGCTACAAGGCGA ATTTCGAGCTGCCCGTCAACGTGAGGCTGCCGCAGGACACCTACCGCTTCTGTGCGCCGGACGGCCGCGCCTGGCTGCTG TTCGCCTCGCCGATGCGCCCGCTCGAAACCGGGGCTGGCACCCTCGGCATCGTCATTCACCGGCGCCTGGCCGACGATCC GCGGGCCGCCACCGCCGGTGCCTCGTCGTCGGACGCATAA
Upstream 100 bases:
>100_bases ACCGTAACCGAGCGAAAGTATAACGAAAGGATCGCCCTTTCGCGCCGCCACGGGGCGCGTGACGGGCGGGCGTATGGACC AAACGCCAAGGAAATGAAAC
Downstream 100 bases:
>100_bases CGGCAGTGGTGCGCCGTCGGCGCCAACCCTGCCCCTTTCCCCACCGATCTCCTTCAGGAGTCAAGATGTCCGATCAATAC CTTGGTGAAATCCGCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSALPTHDELEQLLGQVLIIATADDAAEPLTQARLLSAPPGLAMDEDHTCYKANFELPVNVRLPQDTYRFCAPDGRAWLL FASPMRPLETGAGTLGIVIHRRLADDPRAATAGASSSDA
Sequences:
>Translated_119_residues MSALPTHDELEQLLGQVLIIATADDAAEPLTQARLLSAPPGLAMDEDHTCYKANFELPVNVRLPQDTYRFCAPDGRAWLL FASPMRPLETGAGTLGIVIHRRLADDPRAATAGASSSDA >Mature_118_residues SALPTHDELEQLLGQVLIIATADDAAEPLTQARLLSAPPGLAMDEDHTCYKANFELPVNVRLPQDTYRFCAPDGRAWLLF ASPMRPLETGAGTLGIVIHRRLADDPRAATAGASSSDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12740; Mature: 12608
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALPTHDELEQLLGQVLIIATADDAAEPLTQARLLSAPPGLAMDEDHTCYKANFELPVN CCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE VRLPQDTYRFCAPDGRAWLLFASPMRPLETGAGTLGIVIHRRLADDPRAATAGASSSDA EECCCCHHEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SALPTHDELEQLLGQVLIIATADDAAEPLTQARLLSAPPGLAMDEDHTCYKANFELPVN CCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEE VRLPQDTYRFCAPDGRAWLLFASPMRPLETGAGTLGIVIHRRLADDPRAATAGASSSDA EECCCCHHEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA