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The map label for this gene is omp32 [H]

Identifier: 238024624

GI number: 238024624

Start: 1578819

End: 1579928

Strand: Reverse

Name: omp32 [H]

Synonym: bglu_2g12390

Alternate gene names: 238024624

Gene position: 1579928-1578819 (Counterclockwise)

Preceding gene: 238024627

Following gene: 238024618

Centisome position: 55.88

GC content: 66.58

Gene sequence:

>1110_bases
ATGAAACTTCGCATCGGAACCATCGCGGCGCTGAGCCTCGCCATGCCGGCGGCCGCGTTCGCGCAGTCGAGCGTCACGCT
GTACGGCCGGATCGACGGCGGCGTGCAGTACATCAACCACGTCGCCAACGCGACGCGTACCGGCGCCCGCAGCCTCTGGA
GCGCGGAGGGCGGCGACTGGGGCACCAGCATGTTCGGCCTGAAGGGCGTGGAGGATCTGGGCGGCGGGACGTCGACGATC
TTCGACCTCGAAACCGCGTTCCAGGTGATGAACGGCAGCACGGGCGGCGGCCGCATGTTCTCGCGGCGCGCTTACGTGGG
CCTGAAGAACGACGCCTGGGGCACGCTGCAGGCCGGGCGCAACCTGTTCATCGACAGCGACGGCGTCTGGGAATTCGATC
CGTTCGTGCAGCAGGCGTTCTCGTCGGCCTCGCTGGTGCGCGGCCGCAACTGGCAGCAGACCAACAACAATATCGAATAC
CACAGCCCGGTGTGGAATGGCTTCGACGTGCAGGGGCAGTTCGCGTTCGGCAACCAGGCCCGCTTCAACACCGGTCCCGC
CAACGATTTCGGCCGCTCCGACGGCATCATGCTGTCGTACCATTCGCCGCTGTTCGACGTGCGCGGCATCTATGACGAGC
TGCGCAACGGCAACGGCAGGATGGACAACGTGTTTACGGCCTCGCGCGAGTATTTCGTCGGCACCAACGTCTATCTGCAG
AAGTTCAAGATCCAGGCCGCCTACACGCACTACTCGGCGCCCGACACGCCCGCCGGCCTCGCCGATCGCGCCGATCACGT
CTGGCTCGGCGCGACCTACACGGCCACCCCGGCCTGGGCCGTCACGGCCGGCGGCTTCTACGTGCGGGTGGGCAGCGGCG
GCGGCGATGCCACGCACGATCCGGCGGGCCACGCGATCATGTACGTGCTCGGCACCACCTACAACCTGTCGAAGCGCACG
TTCCTGTACGGTACGGTCGCCTACATGCGCAATGGCGGCAACTCGGATTTCTCGCTGATCGCCGCGTCGCGCGACTCGAC
CACCGGCACCAACCCGATGACGGGCGAATCGCAGACGGGCGCCTACGTCGGCATCATGCACAACTTCTGA

Upstream 100 bases:

>100_bases
GCCGGCGGCACGGGCCCGAGACGCTTCACGGCCGCCTCCAGCAGCGCGGCGGCGCGCCGGAAGTGCCAGTCAATCTGAGA
GAGAGATACAGGCAGGGGAT

Downstream 100 bases:

>100_bases
TGCGCACGCCGGCGGTGCGCCGCCGGCAGCCGGGCAGCGAACCCGGGCAGCGAACCCGGGCAGCAAACCCGGGCCGGCAG
CGGCGCGCGCCGTGGCGCGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKLRIGTIAALSLAMPAAAFAQSSVTLYGRIDGGVQYINHVANATRTGARSLWSAEGGDWGTSMFGLKGVEDLGGGTSTI
FDLETAFQVMNGSTGGGRMFSRRAYVGLKNDAWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTNNNIEY
HSPVWNGFDVQGQFAFGNQARFNTGPANDFGRSDGIMLSYHSPLFDVRGIYDELRNGNGRMDNVFTASREYFVGTNVYLQ
KFKIQAAYTHYSAPDTPAGLADRADHVWLGATYTATPAWAVTAGGFYVRVGSGGGDATHDPAGHAIMYVLGTTYNLSKRT
FLYGTVAYMRNGGNSDFSLIAASRDSTTGTNPMTGESQTGAYVGIMHNF

Sequences:

>Translated_369_residues
MKLRIGTIAALSLAMPAAAFAQSSVTLYGRIDGGVQYINHVANATRTGARSLWSAEGGDWGTSMFGLKGVEDLGGGTSTI
FDLETAFQVMNGSTGGGRMFSRRAYVGLKNDAWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTNNNIEY
HSPVWNGFDVQGQFAFGNQARFNTGPANDFGRSDGIMLSYHSPLFDVRGIYDELRNGNGRMDNVFTASREYFVGTNVYLQ
KFKIQAAYTHYSAPDTPAGLADRADHVWLGATYTATPAWAVTAGGFYVRVGSGGGDATHDPAGHAIMYVLGTTYNLSKRT
FLYGTVAYMRNGGNSDFSLIAASRDSTTGTNPMTGESQTGAYVGIMHNF
>Mature_369_residues
MKLRIGTIAALSLAMPAAAFAQSSVTLYGRIDGGVQYINHVANATRTGARSLWSAEGGDWGTSMFGLKGVEDLGGGTSTI
FDLETAFQVMNGSTGGGRMFSRRAYVGLKNDAWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTNNNIEY
HSPVWNGFDVQGQFAFGNQARFNTGPANDFGRSDGIMLSYHSPLFDVRGIYDELRNGNGRMDNVFTASREYFVGTNVYLQ
KFKIQAAYTHYSAPDTPAGLADRADHVWLGATYTATPAWAVTAGGFYVRVGSGGGDATHDPAGHAIMYVLGTTYNLSKRT
FLYGTVAYMRNGGNSDFSLIAASRDSTTGTNPMTGESQTGAYVGIMHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39841; Mature: 39841

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRIGTIAALSLAMPAAAFAQSSVTLYGRIDGGVQYINHVANATRTGARSLWSAEGGDW
CEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GTSMFGLKGVEDLGGGTSTIFDLETAFQVMNGSTGGGRMFSRRAYVGLKNDAWGTLQAGR
CCHHHCCCCHHHCCCCCCEEEEHHHHHHHHCCCCCCCCEEECEEEEEECCCCCEEHHCCC
NLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTNNNIEYHSPVWNGFDVQGQFAFGNQA
EEEECCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCC
RFNTGPANDFGRSDGIMLSYHSPLFDVRGIYDELRNGNGRMDNVFTASREYFVGTNVYLQ
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCEEEE
KFKIQAAYTHYSAPDTPAGLADRADHVWLGATYTATPAWAVTAGGFYVRVGSGGGDATHD
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCC
PAGHAIMYVLGTTYNLSKRTFLYGTVAYMRNGGNSDFSLIAASRDSTTGTNPMTGESQTG
CCCCEEEEEEECCEECCCCEEEEEEEEEHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
AYVGIMHNF
EEEEEEECC
>Mature Secondary Structure
MKLRIGTIAALSLAMPAAAFAQSSVTLYGRIDGGVQYINHVANATRTGARSLWSAEGGDW
CEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GTSMFGLKGVEDLGGGTSTIFDLETAFQVMNGSTGGGRMFSRRAYVGLKNDAWGTLQAGR
CCHHHCCCCHHHCCCCCCEEEEHHHHHHHHCCCCCCCCEEECEEEEEECCCCCEEHHCCC
NLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTNNNIEYHSPVWNGFDVQGQFAFGNQA
EEEECCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCC
RFNTGPANDFGRSDGIMLSYHSPLFDVRGIYDELRNGNGRMDNVFTASREYFVGTNVYLQ
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCEEEE
KFKIQAAYTHYSAPDTPAGLADRADHVWLGATYTATPAWAVTAGGFYVRVGSGGGDATHD
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCEEEEEECCCCCCCCC
PAGHAIMYVLGTTYNLSKRTFLYGTVAYMRNGGNSDFSLIAASRDSTTGTNPMTGESQTG
CCCCEEEEEEECCEECCCCEEEEEEEEEHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
AYVGIMHNF
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]