Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024620
Identifier: 238024620
GI number: 238024620
Start: 1573756
End: 1574256
Strand: Direct
Name: 238024620
Synonym: bglu_2g12350
Alternate gene names: NA
Gene position: 1573756-1574256 (Clockwise)
Preceding gene: 238024619
Following gene: 238024621
Centisome position: 55.66
GC content: 64.07
Gene sequence:
>501_bases ATGAGCAACCTCAACAATCCCGCTGTCAGACGGCCATATATATCACGATATGATATATTCATCGATTCCGCCCGACCTGG AATCATGATGACCGAATCCACTCACCTTCTGCAGAAAGCCGATTTCGAACAGCTGTCCGAGTTCCGCTACCAGATGCGGC GCTTCGAGCGCTTCTCCGAGCGCGCGGCGCACAACGAGGGCGTGACGCCGCTGCAATACCTGATGCTGCTGCACATCAAG GGCTACCCGGCGCGCGAATGGGCCACCATCGGCGAGCTGGCCGAGCGGCTGCAGGCGCAGCATCACGGCGTGGTCGCGCT GGTCTCGCGCTGCGAGGCGGCCGGGCTCGTCAAGCGCCGGCCCAGCGCGAGCGACCGGCGCCAGGTGGAAGTCCATCTGC TGAAGGCAGGCGAGGCGGTGCTGGTGCGGCTCGCCGCGCTGCATCGCGCCGAACTCAAATCGCTGCGCGGCGCGTTCCAG GTGCCGCAAATCGACTACTAG
Upstream 100 bases:
>100_bases GCCGAGCAGGTGGTCGGACTCGTCACGCAGTCCGACCTGATCACCGGACTGTACCGGGGCACGCGGGAGCGCGAGGCGGC CTGAGCGACCCCCGAAAACA
Downstream 100 bases:
>100_bases CCCCATTTTCCCGCTCCCCGTTCCCCACCATCATGCATGCCACTGCGCCGCACCAGCGCGATTTCGCGCCGAACCTCCGC CTGCCCCGCATCGCCATGCT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; MarR-Family Transcriptional Regulator; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSNLNNPAVRRPYISRYDIFIDSARPGIMMTESTHLLQKADFEQLSEFRYQMRRFERFSERAAHNEGVTPLQYLMLLHIK GYPAREWATIGELAERLQAQHHGVVALVSRCEAAGLVKRRPSASDRRQVEVHLLKAGEAVLVRLAALHRAELKSLRGAFQ VPQIDY
Sequences:
>Translated_166_residues MSNLNNPAVRRPYISRYDIFIDSARPGIMMTESTHLLQKADFEQLSEFRYQMRRFERFSERAAHNEGVTPLQYLMLLHIK GYPAREWATIGELAERLQAQHHGVVALVSRCEAAGLVKRRPSASDRRQVEVHLLKAGEAVLVRLAALHRAELKSLRGAFQ VPQIDY >Mature_165_residues SNLNNPAVRRPYISRYDIFIDSARPGIMMTESTHLLQKADFEQLSEFRYQMRRFERFSERAAHNEGVTPLQYLMLLHIKG YPAREWATIGELAERLQAQHHGVVALVSRCEAAGLVKRRPSASDRRQVEVHLLKAGEAVLVRLAALHRAELKSLRGAFQV PQIDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19052; Mature: 18921
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLNNPAVRRPYISRYDIFIDSARPGIMMTESTHLLQKADFEQLSEFRYQMRRFERFSE CCCCCCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHH RAAHNEGVTPLQYLMLLHIKGYPAREWATIGELAERLQAQHHGVVALVSRCEAAGLVKRR HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PSASDRRQVEVHLLKAGEAVLVRLAALHRAELKSLRGAFQVPQIDY CCCCCCHHEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNLNNPAVRRPYISRYDIFIDSARPGIMMTESTHLLQKADFEQLSEFRYQMRRFERFSE CCCCCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHH RAAHNEGVTPLQYLMLLHIKGYPAREWATIGELAERLQAQHHGVVALVSRCEAAGLVKRR HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC PSASDRRQVEVHLLKAGEAVLVRLAALHRAELKSLRGAFQVPQIDY CCCCCCHHEEHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA