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The map label for this gene is marC [H]

Identifier: 238024616

GI number: 238024616

Start: 1569200

End: 1569868

Strand: Reverse

Name: marC [H]

Synonym: bglu_2g12310

Alternate gene names: 238024616

Gene position: 1569868-1569200 (Counterclockwise)

Preceding gene: 238024618

Following gene: 238024612

Centisome position: 55.52

GC content: 66.82

Gene sequence:

>669_bases
ATGATTTTCCACCGCCTGATTTCCGAAACCCTGTTCGGCTTCACCGGCCTGATGGGCATCCTCAATCCGTTCGGGATCGC
CTTCCTGTTTCTCGAGCGCACCGATTCGCTCAACGAGCACCAGCGCGCCGCGCTCGCGCGCAAGGTGGCGATCAACGCGT
TCATCGTGCTGATGGTGGCGTTTTTCCTCGGCACGCCGGTGCTGCACTTCTTCGGCATTTCGATGGAGGCGCTGCGCATC
GGCGGCGGCTTCGCGGTGGCCGTGTCCGGCTGGCAGATGCTGAACGCGCCGGACGTGCCCGGCGGCGAGGCCGAGGTCAA
GCCGCTCAACCCGCACAACGTGATGGCGCGCGCCTTCTTCCCGCTGACCATTCCGCTGACGGTCGGGCCGGGCTCGGTCG
CCACCGCGATCGCGCTGAACGCGAACCGCACCCACAAGCTCTCCGAGTTCCTGATGTCGAGCATCGTCTCGGTGGCCGTG
TCGGCGCTGGCCGCGCTCGTGATCTGGCAGACCTACAGCCGCGCCGAGGTGCTCGCGCGCTACCTCGGCGCCGAGGGCAC
CAAGGTCGCGCAGCGCGTGTCGGCATTCCTGCTGTTGTGCGTGGGGGTGCAGATCATGCTGACCGGGTTCTCGGCGTTCC
TGCAGCCGCTGGCCGATCAGGCCAAGTGA

Upstream 100 bases:

>100_bases
TCGTTCGCGCCGCCGCCGCATGCCCGAAGCGCTGCACTACAATGGCGCCGGCCTGATTCCGTCCGCCTGGCCGGACGCCG
TCGTCTTTCCTTCTCGACCG

Downstream 100 bases:

>100_bases
GGCGGCGGCGCGGCCCTCGCCGGGCGCTCAGGCGCCCGTCGCCGCGCGCAGCGGGTAGGTGAACAGCGCGAAGTGCACGA
CGTTGAGGCCGGCGTGGGCG

Product: putative membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIFHRLISETLFGFTGLMGILNPFGIAFLFLERTDSLNEHQRAALARKVAINAFIVLMVAFFLGTPVLHFFGISMEALRI
GGGFAVAVSGWQMLNAPDVPGGEAEVKPLNPHNVMARAFFPLTIPLTVGPGSVATAIALNANRTHKLSEFLMSSIVSVAV
SALAALVIWQTYSRAEVLARYLGAEGTKVAQRVSAFLLLCVGVQIMLTGFSAFLQPLADQAK

Sequences:

>Translated_222_residues
MIFHRLISETLFGFTGLMGILNPFGIAFLFLERTDSLNEHQRAALARKVAINAFIVLMVAFFLGTPVLHFFGISMEALRI
GGGFAVAVSGWQMLNAPDVPGGEAEVKPLNPHNVMARAFFPLTIPLTVGPGSVATAIALNANRTHKLSEFLMSSIVSVAV
SALAALVIWQTYSRAEVLARYLGAEGTKVAQRVSAFLLLCVGVQIMLTGFSAFLQPLADQAK
>Mature_222_residues
MIFHRLISETLFGFTGLMGILNPFGIAFLFLERTDSLNEHQRAALARKVAINAFIVLMVAFFLGTPVLHFFGISMEALRI
GGGFAVAVSGWQMLNAPDVPGGEAEVKPLNPHNVMARAFFPLTIPLTVGPGSVATAIALNANRTHKLSEFLMSSIVSVAV
SALAALVIWQTYSRAEVLARYLGAEGTKVAQRVSAFLLLCVGVQIMLTGFSAFLQPLADQAK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=31.2820512820513, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787494, Length=203, Percent_Identity=31.0344827586207, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23834; Mature: 23834

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFHRLISETLFGFTGLMGILNPFGIAFLFLERTDSLNEHQRAALARKVAINAFIVLMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFLGTPVLHFFGISMEALRIGGGFAVAVSGWQMLNAPDVPGGEAEVKPLNPHNVMARAFF
HHHHHHHHHHHCCCHHHEEECCCEEEEECCCEECCCCCCCCCCCEECCCCHHHHHHHEEE
PLTIPLTVGPGSVATAIALNANRTHKLSEFLMSSIVSVAVSALAALVIWQTYSRAEVLAR
EEEEEEEECCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGAEGTKVAQRVSAFLLLCVGVQIMLTGFSAFLQPLADQAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFHRLISETLFGFTGLMGILNPFGIAFLFLERTDSLNEHQRAALARKVAINAFIVLMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FFLGTPVLHFFGISMEALRIGGGFAVAVSGWQMLNAPDVPGGEAEVKPLNPHNVMARAFF
HHHHHHHHHHHCCCHHHEEECCCEEEEECCCEECCCCCCCCCCCEECCCCHHHHHHHEEE
PLTIPLTVGPGSVATAIALNANRTHKLSEFLMSSIVSVAVSALAALVIWQTYSRAEVLAR
EEEEEEEECCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGAEGTKVAQRVSAFLLLCVGVQIMLTGFSAFLQPLADQAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA