Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024615
Identifier: 238024615
GI number: 238024615
Start: 1568309
End: 1569172
Strand: Direct
Name: 238024615
Synonym: bglu_2g12300
Alternate gene names: NA
Gene position: 1568309-1569172 (Clockwise)
Preceding gene: 339717975
Following gene: 238024617
Centisome position: 55.47
GC content: 76.39
Gene sequence:
>864_bases ATGTCCCACCTCTCCCCCCTGCTGCCCTGGGCAGCCATCTTCGCCGCCGCGCTGCTCGCCTGGTGCCCGCGCCTGCGCGC CGCCAGCCTCGTGCTGGCGGCCGTCGGCTACGCCGCCGCGTTCGCGGCCGGCCAGCTCACCGCGCTCGCACTCGCGCCGC TCGCGGGCCTCGCGCTGGCGGCCTGGGCGATCCGCGCGGGCCGCGCCTGGCCGCTGCGCCTCGCGGGCGGCATGCTGTTC ACGATCCTGGCGGCGGCGCTCTCGCTGCATCTGCTGCCCGGCTTCCACAACCCGCGCGTGATCACCGCGGTCCGCTTCAC GCCGGACGCGGTGCCGTTCACGATGTACCTGAATGCCGACAAGGCGCTGGTCGGCTTCTGGCTGCTGTGGGTGCTGCCGT CGGCCGTGCGGCCGGTGCGCTGGAGCAAGTCGCTGCCGCTCGGCGCGGCCGCCGCGCTCGGCACGGCGCTGGTCTGCCTG GCCCTGGCGGCCGCGCTCGGCGCGGTGGGTTGGGCGCCGAAATGGCCGGCGGCCGGCTGGCTCTGGCTTGCCAACAACCT GCTGATCGTCGCGCTCGCCGAGGAGGCGCTGTTTCGCGGCTGGCTCCAGCGCGGCCTCGAGCTCGGCCTCGCGCGCGCCC CGGGCGGCCAGTGGCTGGCCCTGCTCGCGGCCTCGCTCGTGTTCGGTGCGGCCCATGCCTCGGGCGGCGTCGCGTTCGTC GCGCTGGCCACGCTGTCGGGGCTCGGCTATGGCCTCGCCTACCGCTTCGGCGGCCTGCGCGCGGCCTGGCTCGCCCACGC CGGCCTCAACGTCGTGCACTTCGCGCTGTTCACCTACCCGCTGCGCGCGGCGACGGGCGCCTGA
Upstream 100 bases:
>100_bases CGGCGCCAGGCCTGGACCGGCCTTTCACCGGAGCTACATCAGCAAAACGCCGCAGTGCCTGGGCTATGATGTGCGCCCGT CAGTCTCATCGGTCCCCTAT
Downstream 100 bases:
>100_bases GCGCCCGGCGAGGGCCGCGCCGCCGCCTCACTTGGCCTGATCGGCCAGCGGCTGCAGGAACGCCGAGAACCCGGTCAGCA TGATCTGCACCCCCACGCAC
Product: Abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; CAAX Amino Protease; CAAX Protease Family Protein; Membrane-Associated Protease; Membrane-Associated CAAX Amino Terminal Protease; Membrane Associated Protease; Caax Amino Terminal Protease Family; CAAX Amino Terminal Protease
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSHLSPLLPWAAIFAAALLAWCPRLRAASLVLAAVGYAAAFAAGQLTALALAPLAGLALAAWAIRAGRAWPLRLAGGMLF TILAAALSLHLLPGFHNPRVITAVRFTPDAVPFTMYLNADKALVGFWLLWVLPSAVRPVRWSKSLPLGAAAALGTALVCL ALAAALGAVGWAPKWPAAGWLWLANNLLIVALAEEALFRGWLQRGLELGLARAPGGQWLALLAASLVFGAAHASGGVAFV ALATLSGLGYGLAYRFGGLRAAWLAHAGLNVVHFALFTYPLRAATGA
Sequences:
>Translated_287_residues MSHLSPLLPWAAIFAAALLAWCPRLRAASLVLAAVGYAAAFAAGQLTALALAPLAGLALAAWAIRAGRAWPLRLAGGMLF TILAAALSLHLLPGFHNPRVITAVRFTPDAVPFTMYLNADKALVGFWLLWVLPSAVRPVRWSKSLPLGAAAALGTALVCL ALAAALGAVGWAPKWPAAGWLWLANNLLIVALAEEALFRGWLQRGLELGLARAPGGQWLALLAASLVFGAAHASGGVAFV ALATLSGLGYGLAYRFGGLRAAWLAHAGLNVVHFALFTYPLRAATGA >Mature_286_residues SHLSPLLPWAAIFAAALLAWCPRLRAASLVLAAVGYAAAFAAGQLTALALAPLAGLALAAWAIRAGRAWPLRLAGGMLFT ILAAALSLHLLPGFHNPRVITAVRFTPDAVPFTMYLNADKALVGFWLLWVLPSAVRPVRWSKSLPLGAAAALGTALVCLA LAAALGAVGWAPKWPAAGWLWLANNLLIVALAEEALFRGWLQRGLELGLARAPGGQWLALLAASLVFGAAHASGGVAFVA LATLSGLGYGLAYRFGGLRAAWLAHAGLNVVHFALFTYPLRAATGA
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29757; Mature: 29625
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLSPLLPWAAIFAAALLAWCPRLRAASLVLAAVGYAAAFAAGQLTALALAPLAGLALA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAIRAGRAWPLRLAGGMLFTILAAALSLHLLPGFHNPRVITAVRFTPDAVPFTMYLNAD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCC KALVGFWLLWVLPSAVRPVRWSKSLPLGAAAALGTALVCLALAAALGAVGWAPKWPAAGW HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH LWLANNLLIVALAEEALFRGWLQRGLELGLARAPGGQWLALLAASLVFGAAHASGGVAFV HEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ALATLSGLGYGLAYRFGGLRAAWLAHAGLNVVHFALFTYPLRAATGA HHHHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SHLSPLLPWAAIFAAALLAWCPRLRAASLVLAAVGYAAAFAAGQLTALALAPLAGLALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAIRAGRAWPLRLAGGMLFTILAAALSLHLLPGFHNPRVITAVRFTPDAVPFTMYLNAD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEECCC KALVGFWLLWVLPSAVRPVRWSKSLPLGAAAALGTALVCLALAAALGAVGWAPKWPAAGW HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH LWLANNLLIVALAEEALFRGWLQRGLELGLARAPGGQWLALLAASLVFGAAHASGGVAFV HEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ALATLSGLGYGLAYRFGGLRAAWLAHAGLNVVHFALFTYPLRAATGA HHHHHHHCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA