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The map label for this gene is ydhJ [H]

Identifier: 238024608

GI number: 238024608

Start: 1559188

End: 1560237

Strand: Direct

Name: ydhJ [H]

Synonym: bglu_2g12230

Alternate gene names: 238024608

Gene position: 1559188-1560237 (Clockwise)

Preceding gene: 238024607

Following gene: 238024609

Centisome position: 55.15

GC content: 73.33

Gene sequence:

>1050_bases
GTGAAAAGAACCTGGTTCTCGGCAGGACAGATCCTGCTGACCCTGATCGTCGCCGTCGTCGCGGCCCTCGTGCTGTGGCG
CATCGTCAACTACTACATGTTCTCGCCCTGGACCCGCGACGGCCACGTGCGCGCCGACGTGATCCAGGTGGCGCCCGACG
TGTCGGGCCTCGTCACCGCGGTGCCCGTGGTGGACAACCAGGCGGTGCGGCAGGGCCAGGTGCTGTTCGTGATCGACCAG
GCCCGCTACACGCTCGCGCTGCGGCTGGCCGAGGCCGCGCTCGCGCAGCGCCGCGCCACGCTCGCGCAGGCGCGCCGCGA
ATACGCGCGCAACCTGAAGCTCGGCAACCTGGTGGCCAGCGAGCAGTTGGAGGAAAGCCGCACGCGCGTCGAACAAGGCG
AGGCGGCGCTGGCCGACGCCCAGGTCAACGTCGATACCGCGCGGCTCAACCTGCGGCGCACCACCGTCGTGAGCCCGGTG
GACGGCTACCTGAACGATCGCGCGCCGCGCGTGGGCGAATACGTGCCGGCCGGCCGCGCGGTGCTGTCGGTGGTCGACCA
GCATTCGTTCCGGGTGGACGGCTACTTCGAGGAAACCAAGCTGAGCGGCATCCATATCGGCCAGCCGGTGGACATCACCG
TGATGGGCGAGCCGCGCGTGCTGCGCGGCCACGTGCAGAGCATCGTCGCGGCGATCGAGGACCGCGATCGCTCGCAGGGC
GCGAACCTGCTGCCGAACGTGAATCCGGCTTTCAGCTGGGTGCGGCTCGCGCAGCGGATTCCGGTGCGCGTCTCGCTCGA
CGAGGTGCCCGACGATTTCCGCCTGATCGCGGGACGCACCGCGACCGTGGCGATGCGCGCGCCCGGCTCGCCCGCCGCGC
CGCGCCGGCTCGGCGCCGCGGCGGCCGGCACGGCGTCGGGGCTGCCGAGCCCGGCGCATGCGACGGGCGCCTCCGGCCCG
GCGCGCGTCGCAGGCACGGCCAGCGCCGCCCGGCCGACCGGCGCCTCGCCACCGGCATCGCAGGCGGCCACGGCCGGCGC
CGCGCCATGA

Upstream 100 bases:

>100_bases
ACCGTTTCGTCTGGCACCGGTCGATCTTCGACCTCGGCATCTACGTGTTCCTGCTGGCCGGCGTCGTGCTCATCTCCCAC
CATTTCGTGGCTACCCCAAC

Downstream 100 bases:

>100_bases
CGCGCCGCTTCGCGCCCGCGGCCGGCCGCCCGCCGGCATCGCCATCGCGCCGCGCCGCCGCCATGGCGGCACTCTCGGCG
GCGCTGGTGCTCGCGGCCTG

Product: multidrug resistance efflux pump protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTRDGHVRADVIQVAPDVSGLVTAVPVVDNQAVRQGQVLFVIDQ
ARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVASEQLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPV
DGYLNDRAPRVGEYVPAGRAVLSVVDQHSFRVDGYFEETKLSGIHIGQPVDITVMGEPRVLRGHVQSIVAAIEDRDRSQG
ANLLPNVNPAFSWVRLAQRIPVRVSLDEVPDDFRLIAGRTATVAMRAPGSPAAPRRLGAAAAGTASGLPSPAHATGASGP
ARVAGTASAARPTGASPPASQAATAGAAP

Sequences:

>Translated_349_residues
MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTRDGHVRADVIQVAPDVSGLVTAVPVVDNQAVRQGQVLFVIDQ
ARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVASEQLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPV
DGYLNDRAPRVGEYVPAGRAVLSVVDQHSFRVDGYFEETKLSGIHIGQPVDITVMGEPRVLRGHVQSIVAAIEDRDRSQG
ANLLPNVNPAFSWVRLAQRIPVRVSLDEVPDDFRLIAGRTATVAMRAPGSPAAPRRLGAAAAGTASGLPSPAHATGASGP
ARVAGTASAARPTGASPPASQAATAGAAP
>Mature_349_residues
MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTRDGHVRADVIQVAPDVSGLVTAVPVVDNQAVRQGQVLFVIDQ
ARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVASEQLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPV
DGYLNDRAPRVGEYVPAGRAVLSVVDQHSFRVDGYFEETKLSGIHIGQPVDITVMGEPRVLRGHVQSIVAAIEDRDRSQG
ANLLPNVNPAFSWVRLAQRIPVRVSLDEVPDDFRLIAGRTATVAMRAPGSPAAPRRLGAAAAGTASGLPSPAHATGASGP
ARVAGTASAARPTGASPPASQAATAGAAP

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=273, Percent_Identity=41.3919413919414, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1789637, Length=274, Percent_Identity=37.5912408759124, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1788711, Length=364, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790519, Length=318, Percent_Identity=29.874213836478, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789041, Length=304, Percent_Identity=27.9605263157895, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082036, Length=154, Percent_Identity=30.5194805194805, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081796, Length=251, Percent_Identity=25.4980079681275, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37117; Mature: 37117

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTRDGHVRADVIQVAPDVSGLVTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCCEEE
VPVVDNQAVRQGQVLFVIDQARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVAS
EECCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EQLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPVDGYLNDRAPRVGEYVPAGRA
HHHHHHHHHHHHCCHHHCCCEEEEEHHHEEEEHEEEECCCHHHHCCCCCCCCCCCCCHHH
VLSVVDQHSFRVDGYFEETKLSGIHIGQPVDITVMGEPRVLRGHVQSIVAAIEDRDRSQG
HHHHHHHCCEEECCEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
ANLLPNVNPAFSWVRLAQRIPVRVSLDEVPDDFRLIAGRTATVAMRAPGSPAAPRRLGAA
CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCHHHCCH
AAGTASGLPSPAHATGASGPARVAGTASAARPTGASPPASQAATAGAAP
HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTRDGHVRADVIQVAPDVSGLVTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCCEEE
VPVVDNQAVRQGQVLFVIDQARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVAS
EECCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EQLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPVDGYLNDRAPRVGEYVPAGRA
HHHHHHHHHHHHCCHHHCCCEEEEEHHHEEEEHEEEECCCHHHHCCCCCCCCCCCCCHHH
VLSVVDQHSFRVDGYFEETKLSGIHIGQPVDITVMGEPRVLRGHVQSIVAAIEDRDRSQG
HHHHHHHCCEEECCEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
ANLLPNVNPAFSWVRLAQRIPVRVSLDEVPDDFRLIAGRTATVAMRAPGSPAAPRRLGAA
CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCHHHCCH
AAGTASGLPSPAHATGASGPARVAGTASAARPTGASPPASQAATAGAAP
HCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]