Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024575
Identifier: 238024575
GI number: 238024575
Start: 1508023
End: 1508931
Strand: Reverse
Name: 238024575
Synonym: bglu_2g11850
Alternate gene names: NA
Gene position: 1508931-1508023 (Counterclockwise)
Preceding gene: 238024576
Following gene: 238024574
Centisome position: 53.37
GC content: 61.39
Gene sequence:
>909_bases ATGAAAGAAAGAATCAGCCTGGCGGCGGTCTTGGCGTCGCTCGCGACGGTCGGCATCGGTTCCGCCCAGGCGACGGAGAA TGGGCTTGTCAACTATCCGATTGGCGTGAACACCGTCCTCGACGGTGTGCTTCCCGCGCCGGGCGACACTCGTTTCTACA ATTACACGCAGTACTATGTCGCGAACAAGTTCGCCGGCGGGAAGGGCGATAGCGCCGTTCCCGGGTTCCGCAGCAGCGCC TTTGTCGACGCGCCTCGGGTCGTTCACACCTGGAACACGACGCTAGGTCCGTTCACCCTGTCCAGTGGGCTGATTGCCAC CATATTCCACCTCAAACTCGATACCCCGGGCGGAAATGGAACGCGTAGCGCATTCGGCGACACGATCGTGCAGCCCCTGA TGCTCGGCTACGTGAACCGGTCGCATTCGTTCTTCGCCTTTCTTACCAACGATGTCGCTCTACCCACCGGCGCGTACCAG GCCGATCGCGTCGCGAACACCGGGCTGAATACCTATGCCTGGATGCCTAGCCTGAACGTGACATGGTTTCCGGCCCCTGC TTGGGAACTGTCGGGCATGGCCCTGGTAGAACTCAACTCGCCGAACCACGCTACGAACTATCACTCGGGCGCTGTCGCCG CGTTCGACTGGCTCGTGGGATACGCCGTGACAAAACAGGTGCAACTCGGCGTGCAAGGCTTCTATCTCAAACAATTCACG GACGACACGGTCAACGGGCAGTCCGTCAACGAGAACGGCTTCAGAGGACAAGCCGTCGGCATCGGGCCGCAGGTTCGCTG GGAGTGGCGCCCCGGCTCGTCTGTCGTGCTGAAATACCAGCACGAGCTGGCCGTGCGCAATCGCCCGCAGGGCGAGCGAA TCTGGCTCGAAGTCAGCGTACCTCTCTAG
Upstream 100 bases:
>100_bases GTGATGGGTCGTTCGGCCAGGTTCCACGACGGTAACCGATGCCATGGCCGACCATGCCGGTAGATAACAATGAATGAGTC AGTATTCCTAAGGAGACGAA
Downstream 100 bases:
>100_bases CGCCTGCTATGCGCGCTGCGCCATAGCGCTCGACGAACACCTTGTCGCGCCGCGCGCCTTGGCCGTGCCGTCCGTCGACG GCCGAATGCCTCGGCCCTGA
Product: meta-pathway phenol degradation-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKERISLAAVLASLATVGIGSAQATENGLVNYPIGVNTVLDGVLPAPGDTRFYNYTQYYVANKFAGGKGDSAVPGFRSSA FVDAPRVVHTWNTTLGPFTLSSGLIATIFHLKLDTPGGNGTRSAFGDTIVQPLMLGYVNRSHSFFAFLTNDVALPTGAYQ ADRVANTGLNTYAWMPSLNVTWFPAPAWELSGMALVELNSPNHATNYHSGAVAAFDWLVGYAVTKQVQLGVQGFYLKQFT DDTVNGQSVNENGFRGQAVGIGPQVRWEWRPGSSVVLKYQHELAVRNRPQGERIWLEVSVPL
Sequences:
>Translated_302_residues MKERISLAAVLASLATVGIGSAQATENGLVNYPIGVNTVLDGVLPAPGDTRFYNYTQYYVANKFAGGKGDSAVPGFRSSA FVDAPRVVHTWNTTLGPFTLSSGLIATIFHLKLDTPGGNGTRSAFGDTIVQPLMLGYVNRSHSFFAFLTNDVALPTGAYQ ADRVANTGLNTYAWMPSLNVTWFPAPAWELSGMALVELNSPNHATNYHSGAVAAFDWLVGYAVTKQVQLGVQGFYLKQFT DDTVNGQSVNENGFRGQAVGIGPQVRWEWRPGSSVVLKYQHELAVRNRPQGERIWLEVSVPL >Mature_302_residues MKERISLAAVLASLATVGIGSAQATENGLVNYPIGVNTVLDGVLPAPGDTRFYNYTQYYVANKFAGGKGDSAVPGFRSSA FVDAPRVVHTWNTTLGPFTLSSGLIATIFHLKLDTPGGNGTRSAFGDTIVQPLMLGYVNRSHSFFAFLTNDVALPTGAYQ ADRVANTGLNTYAWMPSLNVTWFPAPAWELSGMALVELNSPNHATNYHSGAVAAFDWLVGYAVTKQVQLGVQGFYLKQFT DDTVNGQSVNENGFRGQAVGIGPQVRWEWRPGSSVVLKYQHELAVRNRPQGERIWLEVSVPL
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32675; Mature: 32675
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERISLAAVLASLATVGIGSAQATENGLVNYPIGVNTVLDGVLPAPGDTRFYNYTQYYV CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEEEEEE ANKFAGGKGDSAVPGFRSSAFVDAPRVVHTWNTTLGPFTLSSGLIATIFHLKLDTPGGNG EEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCEECCCCCEEEEEEEEEECCCCCC TRSAFGDTIVQPLMLGYVNRSHSFFAFLTNDVALPTGAYQADRVANTGLNTYAWMPSLNV CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCHHHHHCCCCCEEEECCCCCE TWFPAPAWELSGMALVELNSPNHATNYHSGAVAAFDWLVGYAVTKQVQLGVQGFYLKQFT EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECC DDTVNGQSVNENGFRGQAVGIGPQVRWEWRPGSSVVLKYQHELAVRNRPQGERIWLEVSV CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEHHHHCCCCCCCEEEEEEEC PL CC >Mature Secondary Structure MKERISLAAVLASLATVGIGSAQATENGLVNYPIGVNTVLDGVLPAPGDTRFYNYTQYYV CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCCEEEEEEEEE ANKFAGGKGDSAVPGFRSSAFVDAPRVVHTWNTTLGPFTLSSGLIATIFHLKLDTPGGNG EEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCEECCCCCEEEEEEEEEECCCCCC TRSAFGDTIVQPLMLGYVNRSHSFFAFLTNDVALPTGAYQADRVANTGLNTYAWMPSLNV CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCHHHHHCCCCCEEEECCCCCE TWFPAPAWELSGMALVELNSPNHATNYHSGAVAAFDWLVGYAVTKQVQLGVQGFYLKQFT EEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECC DDTVNGQSVNENGFRGQAVGIGPQVRWEWRPGSSVVLKYQHELAVRNRPQGERIWLEVSV CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEEEHHHHCCCCCCCEEEEEEEC PL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA