| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
Click here to switch to the map view.
The map label for this gene is 23501941
Identifier: 23501941
GI number: 23501941
Start: 1034486
End: 1035316
Strand: Reverse
Name: 23501941
Synonym: BR1063
Alternate gene names: NA
Gene position: 1035316-1034486 (Counterclockwise)
Preceding gene: 23501942
Following gene: 23501940
Centisome position: 49.12
GC content: 55.72
Gene sequence:
>831_bases ATGGCGCAGAGCGATGATAAGCCACTTGATCAGGAGGCGCTTGCCGAGGCCTATAATCGCGCATTGGCCCTGGAAAAAGC TGGCGATTTCGATGCCGCTGCCAAAGCCTATGAGGAAGTTCTGCAAATCGACCCCGACGATCACGGCGGCGCTGCGGTGC GGCTTGCCAGCATGGGGCGCGGTGCGGTTCCGCTGAAAGCGCCTGACGCCTATGTCGCAACGCTTTTCGACCAGCATGCG GAAATGTTTGATACCATTCTGGTGGATCAGCTTGGCTATGATGTTCCGTTGCAGTTACGCGAAATGCTGCTTGAAATGGA CGATGCGTTTAATGTCGAACGTATGCTTGATCTGGGCTGTGGAACGGGCCTTTCCGCCGATGCGCTGGACGATATGGCCG CACACAAAACCGGCGTCGACATTTCTGAAAACATGATCGAAGTGGCGTATGAAAAAGGCGATTACGATGCGCTGTTCGTG GGCGAGGCGGTACGCTTTCTCGAAAGCACAGAGGAAGAAAACTGGGATCTGATCGTAGCGACGGATGTGCTGCCTTACAT GGGCGAACTCGAACGGTTTTTTGCCGGTGTGGCGGAACATCTCAACTCCGGCGGGCATTTCGGTTTTTCCAGTGAGACAT TGGACGATAATCGTCTGGCCGGACGCGCTTTCGTTGTTGGCGATTATCAGCGTTTCGCTCATGCCCAATCTTACGTGCGC GCCATGCTGGACAGTCACGGAATGGATTGCATCCGCTGTGAGGACATCACTGTGCGTAGCGAGCAAGGCGCTCCGGTGCC GGGCCATCTCTATATTGCACGCCGCCGTTGA
Upstream 100 bases:
>100_bases GCTTTCACGGATAAGCGTAGGAGAAGCGGGGAGGGGCGCGCCCTCACAAAACTGCTTCGCACTTTCGGCTCGAAAAGACT CTAAGAAAAGGCAAATATTT
Downstream 100 bases:
>100_bases TCGCTTGCATCGTGAATGCTGAAGCAAGTCTCTTTTCGAGATAGCGCCGATTGCTTTATAGATCAGAACATTGATCATGC AGTTCCATAATCTATCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; 3-Demethylubiquinone-9 3-Methyltransferase; Methyltransferase Protein; TPR Repeat-Containing Methyltransferase; SAM-Dependent Methyltransferase; TPR Repeat-Containing Protein; Two Domain Fusion Protein; Methyltransferase Domain Family; Methyltransferase Domain Family Protein; SAM-Dependent Methyltransferases; TPR Domain-Containing Protein; Protein With TPR Motifs; LOW QUALITY PROTEIN Methyltransferase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAQSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGRGAVPLKAPDAYVATLFDQHA EMFDTILVDQLGYDVPLQLREMLLEMDDAFNVERMLDLGCGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFV GEAVRFLESTEEENWDLIVATDVLPYMGELERFFAGVAEHLNSGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVR AMLDSHGMDCIRCEDITVRSEQGAPVPGHLYIARRR
Sequences:
>Translated_276_residues MAQSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGRGAVPLKAPDAYVATLFDQHA EMFDTILVDQLGYDVPLQLREMLLEMDDAFNVERMLDLGCGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFV GEAVRFLESTEEENWDLIVATDVLPYMGELERFFAGVAEHLNSGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVR AMLDSHGMDCIRCEDITVRSEQGAPVPGHLYIARRR >Mature_275_residues AQSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGRGAVPLKAPDAYVATLFDQHAE MFDTILVDQLGYDVPLQLREMLLEMDDAFNVERMLDLGCGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVG EAVRFLESTEEENWDLIVATDVLPYMGELERFFAGVAEHLNSGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVRA MLDSHGMDCIRCEDITVRSEQGAPVPGHLYIARRR
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30366; Mature: 30235
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC GAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNVERMLDLGC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCC GTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIVA CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCEEEE TDVLPYMGELERFFAGVAEHLNSGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH AMLDSHGMDCIRCEDITVRSEQGAPVPGHLYIARRR HHHHHCCCCEEEECCEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure AQSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGR CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC GAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNVERMLDLGC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCC GTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIVA CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCEEEE TDVLPYMGELERFFAGVAEHLNSGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHH AMLDSHGMDCIRCEDITVRSEQGAPVPGHLYIARRR HHHHHCCCCEEEECCEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA