| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23501925
Identifier: 23501925
GI number: 23501925
Start: 1016847
End: 1017692
Strand: Reverse
Name: 23501925
Synonym: BR1047
Alternate gene names: NA
Gene position: 1017692-1016847 (Counterclockwise)
Preceding gene: 23501926
Following gene: 23501924
Centisome position: 48.28
GC content: 59.34
Gene sequence:
>846_bases ATGTCCTACAAGACGGTGGTTGCCTATTCCCGCAGTGAAGCGGAGTTGAAAAGGGTCCTGTCCGCCATCGGGCTGTTGAG GCAGAAAGTGCCCGATATCCACGTGATCGGACTCTATGCCATCCCTTCTCCCATCGTCTATGCCGACCCTAACGGCTTTA TCGATCCCGGCATGTTCGAGCTGCACGACAAGCAGCACAAGGAATTATCCGAACGGCTGAAGCATGTCTTCGAGGAAGAA ATGCGCCGTCAGGGGATCAATTATGAGTTTCGCGTTACCCGGTCGGATACCGGAACGGCAGCCGATGGCGTTCTCGCCTC CTGCCTTGGTGCGGAACTGCTGATTGCGGGCCAGCCCGACCCCAATGACCCGGCAACCAATGACGAAACCGCTGATACCA TTGTTTTCAACGCAAGCTGCCCGGTTCTGCTGGTACCCTATGCGCCGGTTCTGCCCATGGTTTCGCTTGATCGGATCGTG GTCGCGTTTAACGGAAAGCGCGAAGCCGCACGTGCCGCTTTCGATGCCCTGCCACTCATCAAGCAAGCTGGCAGGACTGA AATCATCTGGATCGATCCACCGGAAGCGGAGGGAGAAGATGAGACGCTTGGCGGCAGCGAACTGGCCGAGGCGCTGGCAC GCCATGGGGTGGGGGTTGAAGTGCTGGCGCTTGCCTCCCAGGGCCGCCATGCGCAGGACGCGCTACGCGAGCATCTGATT GCCGAGCGCGCCGATCTTCTGGTTATGGGGGCATACAGCCATTCGCGCCTGCGTGAGCTTGTGTTTGGTGGTGTCACCCG CTCCCTGCTCAACGACCTGCCCATCCTGACGCTTTTCGCGCGCTAA
Upstream 100 bases:
>100_bases TGAAGCAGGAGGGGGCGGCGTGATGCCGGTCAACTCTTTTTCATGCACAACTCATTACACTATATGTTAAAATAAAAATA TAGCCGGAAGGAGATCGGTC
Downstream 100 bases:
>100_bases AGCATTTTCGAGCCAAAAGTGCGAAGCGGTTTTGCGTCGGATAATGCGACTAAGAAAAGTGTGCATTTTCGAGCCATACG TGCGAAGCACCTACGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein; Universal Stress Protein UspA Family
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSYKTVVAYSRSEAELKRVLSAIGLLRQKVPDIHVIGLYAIPSPIVYADPNGFIDPGMFELHDKQHKELSERLKHVFEEE MRRQGINYEFRVTRSDTGTAADGVLASCLGAELLIAGQPDPNDPATNDETADTIVFNASCPVLLVPYAPVLPMVSLDRIV VAFNGKREAARAAFDALPLIKQAGRTEIIWIDPPEAEGEDETLGGSELAEALARHGVGVEVLALASQGRHAQDALREHLI AERADLLVMGAYSHSRLRELVFGGVTRSLLNDLPILTLFAR
Sequences:
>Translated_281_residues MSYKTVVAYSRSEAELKRVLSAIGLLRQKVPDIHVIGLYAIPSPIVYADPNGFIDPGMFELHDKQHKELSERLKHVFEEE MRRQGINYEFRVTRSDTGTAADGVLASCLGAELLIAGQPDPNDPATNDETADTIVFNASCPVLLVPYAPVLPMVSLDRIV VAFNGKREAARAAFDALPLIKQAGRTEIIWIDPPEAEGEDETLGGSELAEALARHGVGVEVLALASQGRHAQDALREHLI AERADLLVMGAYSHSRLRELVFGGVTRSLLNDLPILTLFAR >Mature_280_residues SYKTVVAYSRSEAELKRVLSAIGLLRQKVPDIHVIGLYAIPSPIVYADPNGFIDPGMFELHDKQHKELSERLKHVFEEEM RRQGINYEFRVTRSDTGTAADGVLASCLGAELLIAGQPDPNDPATNDETADTIVFNASCPVLLVPYAPVLPMVSLDRIVV AFNGKREAARAAFDALPLIKQAGRTEIIWIDPPEAEGEDETLGGSELAEALARHGVGVEVLALASQGRHAQDALREHLIA ERADLLVMGAYSHSRLRELVFGGVTRSLLNDLPILTLFAR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30699; Mature: 30568
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKTVVAYSRSEAELKRVLSAIGLLRQKVPDIHVIGLYAIPSPIVYADPNGFIDPGMFE CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCHHH LHDKQHKELSERLKHVFEEEMRRQGINYEFRVTRSDTGTAADGVLASCLGAELLIAGQPD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCC PNDPATNDETADTIVFNASCPVLLVPYAPVLPMVSLDRIVVAFNGKREAARAAFDALPLI CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHH KQAGRTEIIWIDPPEAEGEDETLGGSELAEALARHGVGVEVLALASQGRHAQDALREHLI HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHH AERADLLVMGAYSHSRLRELVFGGVTRSLLNDLPILTLFAR HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure SYKTVVAYSRSEAELKRVLSAIGLLRQKVPDIHVIGLYAIPSPIVYADPNGFIDPGMFE CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCHHH LHDKQHKELSERLKHVFEEEMRRQGINYEFRVTRSDTGTAADGVLASCLGAELLIAGQPD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCC PNDPATNDETADTIVFNASCPVLLVPYAPVLPMVSLDRIVVAFNGKREAARAAFDALPLI CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHCEEEEEECCCHHHHHHHHHHHHHH KQAGRTEIIWIDPPEAEGEDETLGGSELAEALARHGVGVEVLALASQGRHAQDALREHLI HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHH AERADLLVMGAYSHSRLRELVFGGVTRSLLNDLPILTLFAR HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA