| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23501907
Identifier: 23501907
GI number: 23501907
Start: 994932
End: 995552
Strand: Reverse
Name: 23501907
Synonym: BR1028
Alternate gene names: NA
Gene position: 995552-994932 (Counterclockwise)
Preceding gene: 23501911
Following gene: 23501904
Centisome position: 47.23
GC content: 57.17
Gene sequence:
>621_bases ATGAATTTCAAGAAACGGGTTCTGGCATTGGCTGCAGCTATGGCCATTCTGACCCCGCAGGCTGAAGCCGCCGCCATTTT TCGCAAGTTTCAATATTATACGATCAATGGCAAGACAGCCGCCGATCTCGACAAGGCACTTTCACGCAGCGGCCCCTTTC TCAAGAAAACCGGGCAACACCATCCCGGCGCGGCAGAAATCCGCTTTGATGCCAAGGTTCGCTATGGGCGCGAACCGGGT AAGCCCTGCAAGGTGCAGGATGTTTATGTGAACGTTCACGCGAAGGTCTCGCTCCCGCGCTGGAAGCAGCGCCGCAAGGC ATCGCCTGAACTGGCCCTGATCTGGGACACGCTGTTGCAGGATATCCGGCGTCACGAGGAGAGCCATATCGTGATCGCGC GCAGCCATGCAAGTGAAATGGAGCGCGAGATCCGCAGCTTGCGCAGCCGCGCCGATTGCGCCTCACTTCGTGCTGATATC GACAAGGTCACATCGCGTGTGATGGAAGCGCATGATGAAGCGCAGCAATATTTCGACCGGGTTGAGACCATCAATTTCGG GAACCGGTTTGAACGTCTTTTGACCTACGGGCTGGAGCGGATGCGCCAGACGGGCCATTGA
Upstream 100 bases:
>100_bases TTCATTTCATGAGTGGCGTTATAGTTCTCTTGACCTTTGCGTGCCATGTTTGCCACCGCAATTTTAAGTTTCTTCTGGTT TGAGAAAGAGGTGCCAGAAC
Downstream 100 bases:
>100_bases CCCGTCAACCCTGTGCTTTTGCAATATATTGACGGATGGCCTGCGTCATCAAAGCCGCTTCATGAAAGCCGGACAGGATC AGTTTGAGCTTTCCCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNFKKRVLALAAAMAILTPQAEAAAIFRKFQYYTINGKTAADLDKALSRSGPFLKKTGQHHPGAAEIRFDAKVRYGREPG KPCKVQDVYVNVHAKVSLPRWKQRRKASPELALIWDTLLQDIRRHEESHIVIARSHASEMEREIRSLRSRADCASLRADI DKVTSRVMEAHDEAQQYFDRVETINFGNRFERLLTYGLERMRQTGH
Sequences:
>Translated_206_residues MNFKKRVLALAAAMAILTPQAEAAAIFRKFQYYTINGKTAADLDKALSRSGPFLKKTGQHHPGAAEIRFDAKVRYGREPG KPCKVQDVYVNVHAKVSLPRWKQRRKASPELALIWDTLLQDIRRHEESHIVIARSHASEMEREIRSLRSRADCASLRADI DKVTSRVMEAHDEAQQYFDRVETINFGNRFERLLTYGLERMRQTGH >Mature_206_residues MNFKKRVLALAAAMAILTPQAEAAAIFRKFQYYTINGKTAADLDKALSRSGPFLKKTGQHHPGAAEIRFDAKVRYGREPG KPCKVQDVYVNVHAKVSLPRWKQRRKASPELALIWDTLLQDIRRHEESHIVIARSHASEMEREIRSLRSRADCASLRADI DKVTSRVMEAHDEAQQYFDRVETINFGNRFERLLTYGLERMRQTGH
Specific function: Unknown
COG id: COG5661
COG function: function code O; Predicted secreted Zn-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23674; Mature: 23674
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKRVLALAAAMAILTPQAEAAAIFRKFQYYTINGKTAADLDKALSRSGPFLKKTGQH CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHCCCC HPGAAEIRFDAKVRYGREPGKPCKVQDVYVNVHAKVSLPRWKQRRKASPELALIWDTLLQ CCCCEEEEEECEEECCCCCCCCCEEEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH DIRRHEESHIVIARSHASEMEREIRSLRSRADCASLRADIDKVTSRVMEAHDEAQQYFDR HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VETINFGNRFERLLTYGLERMRQTGH HHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFKKRVLALAAAMAILTPQAEAAAIFRKFQYYTINGKTAADLDKALSRSGPFLKKTGQH CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCHHHCCCC HPGAAEIRFDAKVRYGREPGKPCKVQDVYVNVHAKVSLPRWKQRRKASPELALIWDTLLQ CCCCEEEEEECEEECCCCCCCCCEEEEEEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH DIRRHEESHIVIARSHASEMEREIRSLRSRADCASLRADIDKVTSRVMEAHDEAQQYFDR HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VETINFGNRFERLLTYGLERMRQTGH HHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA