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The map label for this gene is cbbZ [H]

Identifier: 23501888

GI number: 23501888

Start: 971127

End: 971831

Strand: Reverse

Name: cbbZ [H]

Synonym: BR1008

Alternate gene names: 23501888

Gene position: 971831-971127 (Counterclockwise)

Preceding gene: 23501897

Following gene: 23501887

Centisome position: 46.11

GC content: 57.59

Gene sequence:

>705_bases
ATGTCCCCAGTCAGCCAGAAGCCCATCATTGTTTTCGACCTCGACGGAACATTGGTGGATACAGCCCCCGACCTTCTGGA
CAGTCTCAACCATTGCCTTGCCATTTCCGGCCTGAAAACCGCCGACCGGGGATCGCTGCGCCGTTTTGTGGGCCAGGGCG
CTCGCGTCATGATCGAGCGCGCCTTTGCCGCACAGCAGCAACAGCTCGATGACGCAAGGCTCGATAAACTGGTGGAAGAG
TTTCGCGCGCATTATGCCGCACATATGCCCGGCCATTCCTCGTTCTTTCCCGGCGCGCTGGAAGCCATGGACCGTTTTGC
AAGCAATGGTTATCAACTGGCCGTTTGCACCAATAAATATGAGGAACTGTCGGTCAAGCTTTTGACCTCAATGGGGGAAG
CCGCGCGCTTTGCGGCCATCTGCGGCGCCGACACATTCTCCTGGCGCAAACCCGACCCACGCCATCTAATCGAAACGATC
GCACGCGCTGGCGGCAATCGTGACCGCGCCTTGATGGTGGGCGACAGCCGCACCGACATAGACACGGCCAAGGCCGCAGG
AATTCCCGTGGTAGCCGTGGATTTCGGATATTCGGACTTGCCGGTTCAGCATTACGAACCAAGCCGCGTCATCTCACATT
ATAATGAATTCACACTTGAAATGGCCGGTGATCTGATTGCCGCCGTGGCTGATCCGGCACAATGA

Upstream 100 bases:

>100_bases
GCAGAAATTCGCCCATATTGGTTGGCGCCAGCGAACTTGAGCCCATGTGAAGGATCGGATAGGTATTTAATTATCGTTTT
TCATTCCGGAAAGAAATGCA

Downstream 100 bases:

>100_bases
TAAGTGGATTAGTAAAGCAACTTCTTATAGTTGCGTTTTCTTTTTCAAGCTTCTCCTTAGCGGCAGAAGCAAAGGACATG
CAGCAGACGGAGCTTCCAGG

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGSLRRFVGQGARVMIERAFAAQQQQLDDARLDKLVEE
FRAHYAAHMPGHSSFFPGALEAMDRFASNGYQLAVCTNKYEELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETI
ARAGGNRDRALMVGDSRTDIDTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMAGDLIAAVADPAQ

Sequences:

>Translated_234_residues
MSPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGSLRRFVGQGARVMIERAFAAQQQQLDDARLDKLVEE
FRAHYAAHMPGHSSFFPGALEAMDRFASNGYQLAVCTNKYEELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETI
ARAGGNRDRALMVGDSRTDIDTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMAGDLIAAVADPAQ
>Mature_233_residues
SPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGSLRRFVGQGARVMIERAFAAQQQQLDDARLDKLVEEF
RAHYAAHMPGHSSFFPGALEAMDRFASNGYQLAVCTNKYEELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETIA
RAGGNRDRALMVGDSRTDIDTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMAGDLIAAVADPAQ

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=206, Percent_Identity=30.5825242718447, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25513; Mature: 25382

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGSLRRFVGQGARVMIER
CCCCCCCCEEEEECCCCEECCHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCHHHHHHH
AFAAQQQQLDDARLDKLVEEFRAHYAAHMPGHSSFFPGALEAMDRFASNGYQLAVCTNKY
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCH
EELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETIARAGGNRDRALMVGDSRTDI
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCC
DTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMAGDLIAAVADPAQ
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGSLRRFVGQGARVMIER
CCCCCCCEEEEECCCCEECCHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCHHHHHHH
AFAAQQQQLDDARLDKLVEEFRAHYAAHMPGHSSFFPGALEAMDRFASNGYQLAVCTNKY
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCH
EELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETIARAGGNRDRALMVGDSRTDI
HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCC
DTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMAGDLIAAVADPAQ
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]