Click here to switch to the map view.

The map label for this gene is 23501849

Identifier: 23501849

GI number: 23501849

Start: 937800

End: 938825

Strand: Reverse

Name: 23501849

Synonym: BR0966

Alternate gene names: NA

Gene position: 938825-937800 (Counterclockwise)

Preceding gene: 23501855

Following gene: 23501847

Centisome position: 44.54

GC content: 50.88

Gene sequence:

>1026_bases
ATGGTTACAGTTGATTTGAAAGGCATCCACAAAGTTAACGCAAAGGGCCGCACGTATTATTATGCATGGCGTGGCGGCCC
GGCCCTTCGTGGAGAACCCGGATCGGCTGAATTTATGGCTTCGCTTCAAGAAGCAAATGATAGTCGGGTAATTCCAGATG
CTTCAAAGTTTCGCGCCGTTATCACGGCCTATAAGTCTAGCCACGACTACCAGAAGCTAGCCGACAGCACGAAACGCAAT
TGGAATGGATGGCTGGATAGGATCGGGAAAAAATTCGGGGACTTGAGCATAGCGCAGTTTGATCTACCTCAGAAAATACG
GCCAGTCATTCGAAAATGGCGCGGGGAGTTTGCCGATAAGCCACGAACTGCGGACTATGGAATGCAAGTCCTTTCCCGCG
TTCTGTCCTATGCTGTAGACCCTCTTGGCAAGATTAGCCAAAATCCATGTGAAGGCATTAAGCAGCTATACAAAAACGAC
CGTGCCGCCATCATATGGACAGATCAGGATATCGCGCGGCTCAAAACGAAATGTTCACCCGAAGTCGCATGGGCGGTTGA
TCTAGCAGCCCACACAGGCTTGCGCGCTGGCGATCTTTTGCGGCTGTCATGGTCTCATATCACCGATAACGCAATAATCC
TACCCACCGGGAAAAGTCGTCACACGAAGGAAGCGGTCATTCCTCTTTACGCGGAATTGAGGGCCTTGCTTCAAACGATC
CCACGCCGGTCTCCTATTGTCTTGACAAACACCAGGAAAGCACCTTGGACGGTAAACGGGTTTGGGTCATCGTTTTCAGA
CTGCCGCGAAGAAGCAAAGCTTGGCGATAGAGATTTACACTTTCACGACTTCCGTGGGACGGCGGCGACAAAGTTCTATA
TCGCCGGTCTGTCCGAACGTGTAATTGCTGAAATCATGGGGTGGGAAGAAGAAACCGTGCGGAACATTATCCGGCGGTAT
GTGAGCAGAACGGCTGCTATAGAGGCCACGATAAAACAGATTGACGAGGCCAGAAAGAGAACGTAG

Upstream 100 bases:

>100_bases
TGCACCGATGGGGCGATCCTGATTTATTCAGACAATGATGAACGGGTCATCGATCAGGATAGCGATCTGGACAAAGAGCT
AAGGGCATTCGAAGCAAAGC

Downstream 100 bases:

>100_bases
CTTGTAAAATACGCTGTAAAACTTTATAGATGATCGACATAAATTTTCGTCATAAAGCACTGAAATAATTTACAGTTTGC
GGGTATGATGTAATGGTAGC

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase; Phage-Related Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRVIPDASKFRAVITAYKSSHDYQKLADSTKRN
WNGWLDRIGKKFGDLSIAQFDLPQKIRPVIRKWRGEFADKPRTADYGMQVLSRVLSYAVDPLGKISQNPCEGIKQLYKND
RAAIIWTDQDIARLKTKCSPEVAWAVDLAAHTGLRAGDLLRLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTI
PRRSPIVLTNTRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSERVIAEIMGWEEETVRNIIRRY
VSRTAAIEATIKQIDEARKRT

Sequences:

>Translated_341_residues
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRVIPDASKFRAVITAYKSSHDYQKLADSTKRN
WNGWLDRIGKKFGDLSIAQFDLPQKIRPVIRKWRGEFADKPRTADYGMQVLSRVLSYAVDPLGKISQNPCEGIKQLYKND
RAAIIWTDQDIARLKTKCSPEVAWAVDLAAHTGLRAGDLLRLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTI
PRRSPIVLTNTRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSERVIAEIMGWEEETVRNIIRRY
VSRTAAIEATIKQIDEARKRT
>Mature_341_residues
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRVIPDASKFRAVITAYKSSHDYQKLADSTKRN
WNGWLDRIGKKFGDLSIAQFDLPQKIRPVIRKWRGEFADKPRTADYGMQVLSRVLSYAVDPLGKISQNPCEGIKQLYKND
RAAIIWTDQDIARLKTKCSPEVAWAVDLAAHTGLRAGDLLRLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTI
PRRSPIVLTNTRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSERVIAEIMGWEEETVRNIIRRY
VSRTAAIEATIKQIDEARKRT

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38517; Mature: 38517

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRVIPDASKFRAV
CEEEEECCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
ITAYKSSHDYQKLADSTKRNWNGWLDRIGKKFGDLSIAQFDLPQKIRPVIRKWRGEFADK
HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC
PRTADYGMQVLSRVLSYAVDPLGKISQNPCEGIKQLYKNDRAAIIWTDQDIARLKTKCSP
CCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCC
EVAWAVDLAAHTGLRAGDLLRLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTI
CHHHHHHHHHHCCCCCCCEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
PRRSPIVLTNTRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSER
CCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHEECCHHHH
VIAEIMGWEEETVRNIIRRYVSRTAAIEATIKQIDEARKRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTVDLKGIHKVNAKGRTYYYAWRGGPALRGEPGSAEFMASLQEANDSRVIPDASKFRAV
CEEEEECCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH
ITAYKSSHDYQKLADSTKRNWNGWLDRIGKKFGDLSIAQFDLPQKIRPVIRKWRGEFADK
HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC
PRTADYGMQVLSRVLSYAVDPLGKISQNPCEGIKQLYKNDRAAIIWTDQDIARLKTKCSP
CCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCC
EVAWAVDLAAHTGLRAGDLLRLSWSHITDNAIILPTGKSRHTKEAVIPLYAELRALLQTI
CHHHHHHHHHHCCCCCCCEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
PRRSPIVLTNTRKAPWTVNGFGSSFSDCREEAKLGDRDLHFHDFRGTAATKFYIAGLSER
CCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHEECCHHHH
VIAEIMGWEEETVRNIIRRYVSRTAAIEATIKQIDEARKRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA