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The map label for this gene is yfgC [C]

Identifier: 23501796

GI number: 23501796

Start: 880484

End: 881899

Strand: Reverse

Name: yfgC [C]

Synonym: BR0910

Alternate gene names: 23501796

Gene position: 881899-880484 (Counterclockwise)

Preceding gene: 23501798

Following gene: 23501795

Centisome position: 41.84

GC content: 58.55

Gene sequence:

>1416_bases
ATGGGAACGACGACTGCACCTTTCCCTGCAAAAACGCTTTCTTTTCGTAACCTTATACGCCGTTTTGTGGCCGCTTCCGG
AGCCATCGCCATTGCCGTGACAGGCGCTTTTCCTGCCTCGGCTCAAGCGCGCGGGGGCGGTGTGCCCATTATCCGCGATG
CCGAAATCGAGGCGCTCGTTGCCGATTATGCCGCACCTATCCTGAAGGTCGCAGGCCTTGGCAAGCGCGGGGTGCGGGTC
ATTCTGGTGAACTCGCCAAGCTTCAACGCCTTTGTCGATGGCCGCCGCATTTTCGTTAATACGGGCGCCATCATGCAAGC
CGAAACGCCAAATGAGATCATCGGCGTCATTGCACATGAATCGGGCCATCTCGCCGGAGGGCATCAGGACAGGCTGCGCG
AACAGTTAAGCCGTGCGCGCACCATGGCGATCATCGGAATGCTTCTGGGGGTCGGGGCTGGTGTTGCGGGTGCAGCCGGC
GGCAGCGGCAACGCGGCTGGTGCAGGTGCGGGCATTGCACTTGGCAGCAATGAAATGGCAATGCGCAGCCTGCTCAATTA
TCAGCGCACCGAAGAAATGACCGCCGACCGTCTTGCGGTCAATTATCTCAATGCCACGGGCCAATCGACCAAGGGCATGC
TGGAAACATTCCAGCGTTTTGCGTCCGCGCTGTCACTTTCGGGGACGCAGATCGATCAGTACAGGATCAGCCACCCGCTT
CCGCGCGAACGTATCGCCAATCTGGAAGAACTTGCGAAGAAGAGCCCCTATTACAACAAGACCGATTCCCCCGCCCTCCA
GCTTCGCCACGACATGGCTCGCGCAAAGATCGCGGCCTATTCCGGCAATATGGGCGCGCTCCAGCGCATGTTCCGCAACA
ATCCGGGCGGATTGGCCGCGCGCTACGGCAGTGCCATCACGACCTATCTGAACGGATCGGCGCGCGCAGCTCTGCCGAAA
TTCGACGCCCTTATCAAAGAACAGCCGAAGAACCCCTATTTCCAGGAAATGCGGGGAGAAGTTCTGATCAAGGCCAATGA
TGCGGCAGGCGCAGCAAAAGCCTTCCAGAAGGCGGTTTCGCTTGATCCGCACAAATCGCCGCTTCTGCGCATGAGCTACG
GTCGCGCGCTGATGCTGACAGGCACGAAGGCGAACATGCCTGCCGCCATCAGGGAGATCAAGGCGGGAATCGCCTCGGAT
CCTGAATTCCCGGATGGCTATAGCTATCTTGCACAAGCTTATGGCCAGCAGGGCGACATGGCCCGTGCAGACCTTGCGAC
AGCCGATATGAACTATTATGCGGGTAAGTTACAACAGGCCCAGATATTCGCAATCCGTGCGCAAAAACAGATGAAGCCGG
GAACTCCCGACTGGCTTCGCGCGCAGGACATCATCAACGCAAAGAAGTCCAAGTAG

Upstream 100 bases:

>100_bases
CGACCTCACCTGGAGAAGCGTATCCGCGACACCGGCCTATCGGTGATTGAATGCACAGGCTATAAGATTCGTCACCGTTT
CAAGAAGGACAACGCGAAAT

Downstream 100 bases:

>100_bases
GATCGGCACAGCCCATCACGACCTTGAGACAGAATTAGGATTTTCGGATGAAAAATGCGGCTTCCATTACGATAGCGAGC
GGTATTATCGGCTTGGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MGTTTAPFPAKTLSFRNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRV
ILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAG
GSGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
PRERIANLEELAKKSPYYNKTDSPALQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPK
FDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASD
PEFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK

Sequences:

>Translated_471_residues
MGTTTAPFPAKTLSFRNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRV
ILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAG
GSGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
PRERIANLEELAKKSPYYNKTDSPALQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPK
FDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASD
PEFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
>Mature_470_residues
GTTTAPFPAKTLSFRNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALVADYAAPILKVAGLGKRGVRVI
LVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHESGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGG
SGNAAGAGAGIALGSNEMAMRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPLP
RERIANLEELAKKSPYYNKTDSPALQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAARYGSAITTYLNGSARAALPKF
DALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVSLDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDP
EFPDGYSYLAQAYGQQGDMARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=424, Percent_Identity=21.4622641509434, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 50206; Mature: 50075

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTTAPFPAKTLSFRNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCHHHHHH
ADYAAPILKVAGLGKRGVRVILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHE
HHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEECCEEEECCCCCCEEEEEEEC
SGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGGSGNAAGAGAGIALGSNEMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHH
MRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PRERIANLEELAKKSPYYNKTDSPALQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAA
CHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
RYGSAITTYLNGSARAALPKFDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVS
HHCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHC
LDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDPEFPDGYSYLAQAYGQQGDM
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
ARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
HHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTTTAPFPAKTLSFRNLIRRFVAASGAIAIAVTGAFPASAQARGGGVPIIRDAEIEALV
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCHHHHHH
ADYAAPILKVAGLGKRGVRVILVNSPSFNAFVDGRRIFVNTGAIMQAETPNEIIGVIAHE
HHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEECCEEEECCCCCCEEEEEEEC
SGHLAGGHQDRLREQLSRARTMAIIGMLLGVGAGVAGAAGGSGNAAGAGAGIALGSNEMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHH
MRSLLNYQRTEEMTADRLAVNYLNATGQSTKGMLETFQRFASALSLSGTQIDQYRISHPL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCC
PRERIANLEELAKKSPYYNKTDSPALQLRHDMARAKIAAYSGNMGALQRMFRNNPGGLAA
CHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH
RYGSAITTYLNGSARAALPKFDALIKEQPKNPYFQEMRGEVLIKANDAAGAAKAFQKAVS
HHCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHC
LDPHKSPLLRMSYGRALMLTGTKANMPAAIREIKAGIASDPEFPDGYSYLAQAYGQQGDM
CCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
ARADLATADMNYYAGKLQQAQIFAIRAQKQMKPGTPDWLRAQDIINAKKSK
HHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]