| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is bcr [H]
Identifier: 23501720
GI number: 23501720
Start: 811163
End: 812428
Strand: Reverse
Name: bcr [H]
Synonym: BR0833
Alternate gene names: 23501720
Gene position: 812428-811163 (Counterclockwise)
Preceding gene: 23501722
Following gene: 23501715
Centisome position: 38.54
GC content: 58.14
Gene sequence:
>1266_bases ATGCCGCTCGACATCAAGGACGGTTCGCCAAGCCATCAGACATCCATACGCGGACGCGGTGAATTTATTGCGCTCATCGC CGCCATCATGGCTATCAATGCCCTCGCTGTCGATATCATGTTGCCGGGCCTGCCGCAGATCGGCGCCAGCCTCGGTGTAC ATTCTGAAAATCATGTTCAGTTCGTAATCACGGCCTATCTGCTGGGTTTCGGTGTTTCGCAGCTTTTCTATGGCCCATTG AGCGACCGTTTCGGGCGCAGGCTGCCGCTTTTCGGCAGTCTGGCCATCTATGTTGTCGCCGCACTGGGCTCTGCCTTTGT AACCGACTTCACGACGCTCATCATTCTGCGTGTGCTGCAAGGGCTTGGCGCTGCCGCAACGCGCGTGATTGCCGTGTCCG TCGTTCGCGACAAGTTTTCCGGCCGCCAGATGGCGGAAGTCATGTCGCTTGTCATGATGGTTTTCATGATCCTTCCGGTC GTGGCGCCCGCCACCGGCCAGCTCATCATGCTGTTCGGCGAATGGCACCTGATCTTCATGTTCATGGCCATTATGGCGCT TGTCGTCGGCCTGTGGGCATTCCTTCGCCTGCCGGAAACGCTCCCCGTGAGCCGTCGCCGCCCGCTCACCATGAAAAGTA CGCTTGGCGGTTTCGTGATTGTCCTTACGAACCGCGTGGCGCTGTTCTATATGCTGGGGACCTCGTTCATTCTCGGCGCC CTCTTCGGCTATATCAATTCCGCACAGCAGATTTTTGTCGGCATCTATCAGCTCGGTACATTATTCCCGCTGGCCTTTGC CGCCGTGGCCATGACGCTTGCGCTTGCCTCGTTCCTGAATTCGCGGCTGGTGGGGCGCTTCGGGATGCGGCGCATTTCCC AGACCATGCTGCTCGTTTTCACGAGCTTCAGCCTTCTCTGGATGGTGCTGTCTATCGTCATGGATGGCCCCATTCCATTT GCGGTTCTGATGATAATCTATATGACCATCATGCTCTCGTTCAGCCTTGTGACCGCCAATTTCAATGCGCTGGCCATGGA ACCCCTGGGCGAAGTGGCTGGCACGGCTTCTTCCGTGCTGGGCTTCGCACAGACCGTCATCGGCGCGGCACTCGGCGCGG TGATAGGACAGGCTTTCGACGGCACCACCACGCCCGTTGCCACCGGCTATTGCGTGCTCGGTTTCGTGGCGCTTGCCTGT GTGCTTATCGCCGAACGCGGACGGTTGTTCAGGGTTCAAAATCCGCCAGCCGAACATGTGATCTAA
Upstream 100 bases:
>100_bases AGCGGCTGCGCGCACAAAGGTCCGGCAAGCCGCTCTGGGATCTTTATTCCGCGCTGCACCTTTCTGAGGCGGCGCACCAA TATGCCAGGGAATGCCAGCC
Downstream 100 bases:
>100_bases TCACCCTTCGCAAATGTAAAAGCCCGCCTGACCGGCGGGCTCAGACTGCTGACAAACCTCGGGCAGGGTCAAAATGGCCT CAGATTCACGGAACGTCACA
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MPLDIKDGSPSHQTSIRGRGEFIALIAAIMAINALAVDIMLPGLPQIGASLGVHSENHVQFVITAYLLGFGVSQLFYGPL SDRFGRRLPLFGSLAIYVVAALGSAFVTDFTTLIILRVLQGLGAAATRVIAVSVVRDKFSGRQMAEVMSLVMMVFMILPV VAPATGQLIMLFGEWHLIFMFMAIMALVVGLWAFLRLPETLPVSRRRPLTMKSTLGGFVIVLTNRVALFYMLGTSFILGA LFGYINSAQQIFVGIYQLGTLFPLAFAAVAMTLALASFLNSRLVGRFGMRRISQTMLLVFTSFSLLWMVLSIVMDGPIPF AVLMIIYMTIMLSFSLVTANFNALAMEPLGEVAGTASSVLGFAQTVIGAALGAVIGQAFDGTTTPVATGYCVLGFVALAC VLIAERGRLFRVQNPPAEHVI
Sequences:
>Translated_421_residues MPLDIKDGSPSHQTSIRGRGEFIALIAAIMAINALAVDIMLPGLPQIGASLGVHSENHVQFVITAYLLGFGVSQLFYGPL SDRFGRRLPLFGSLAIYVVAALGSAFVTDFTTLIILRVLQGLGAAATRVIAVSVVRDKFSGRQMAEVMSLVMMVFMILPV VAPATGQLIMLFGEWHLIFMFMAIMALVVGLWAFLRLPETLPVSRRRPLTMKSTLGGFVIVLTNRVALFYMLGTSFILGA LFGYINSAQQIFVGIYQLGTLFPLAFAAVAMTLALASFLNSRLVGRFGMRRISQTMLLVFTSFSLLWMVLSIVMDGPIPF AVLMIIYMTIMLSFSLVTANFNALAMEPLGEVAGTASSVLGFAQTVIGAALGAVIGQAFDGTTTPVATGYCVLGFVALAC VLIAERGRLFRVQNPPAEHVI >Mature_420_residues PLDIKDGSPSHQTSIRGRGEFIALIAAIMAINALAVDIMLPGLPQIGASLGVHSENHVQFVITAYLLGFGVSQLFYGPLS DRFGRRLPLFGSLAIYVVAALGSAFVTDFTTLIILRVLQGLGAAATRVIAVSVVRDKFSGRQMAEVMSLVMMVFMILPVV APATGQLIMLFGEWHLIFMFMAIMALVVGLWAFLRLPETLPVSRRRPLTMKSTLGGFVIVLTNRVALFYMLGTSFILGAL FGYINSAQQIFVGIYQLGTLFPLAFAAVAMTLALASFLNSRLVGRFGMRRISQTMLLVFTSFSLLWMVLSIVMDGPIPFA VLMIIYMTIMLSFSLVTANFNALAMEPLGEVAGTASSVLGFAQTVIGAALGAVIGQAFDGTTTPVATGYCVLGFVALACV LIAERGRLFRVQNPPAEHVI
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=361, Percent_Identity=30.4709141274238, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1790146, Length=352, Percent_Identity=29.8295454545455, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI87082312, Length=368, Percent_Identity=28.804347826087, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI48994889, Length=232, Percent_Identity=28.0172413793103, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1790794, Length=196, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324264, Length=168, Percent_Identity=30.3571428571429, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45251; Mature: 45120
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDIKDGSPSHQTSIRGRGEFIALIAAIMAINALAVDIMLPGLPQIGASLGVHSENHVQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHH FVITAYLLGFGVSQLFYGPLSDRFGRRLPLFGSLAIYVVAALGSAFVTDFTTLIILRVLQ HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAAATRVIAVSVVRDKFSGRQMAEVMSLVMMVFMILPVVAPATGQLIMLFGEWHLIFM HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH FMAIMALVVGLWAFLRLPETLPVSRRRPLTMKSTLGGFVIVLTNRVALFYMLGTSFILGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH LFGYINSAQQIFVGIYQLGTLFPLAFAAVAMTLALASFLNSRLVGRFGMRRISQTMLLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFSLLWMVLSIVMDGPIPFAVLMIIYMTIMLSFSLVTANFNALAMEPLGEVAGTASSVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GFAQTVIGAALGAVIGQAFDGTTTPVATGYCVLGFVALACVLIAERGRLFRVQNPPAEHV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC I C >Mature Secondary Structure PLDIKDGSPSHQTSIRGRGEFIALIAAIMAINALAVDIMLPGLPQIGASLGVHSENHVQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHH FVITAYLLGFGVSQLFYGPLSDRFGRRLPLFGSLAIYVVAALGSAFVTDFTTLIILRVLQ HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAAATRVIAVSVVRDKFSGRQMAEVMSLVMMVFMILPVVAPATGQLIMLFGEWHLIFM HCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH FMAIMALVVGLWAFLRLPETLPVSRRRPLTMKSTLGGFVIVLTNRVALFYMLGTSFILGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH LFGYINSAQQIFVGIYQLGTLFPLAFAAVAMTLALASFLNSRLVGRFGMRRISQTMLLVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFSLLWMVLSIVMDGPIPFAVLMIIYMTIMLSFSLVTANFNALAMEPLGEVAGTASSVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GFAQTVIGAALGAVIGQAFDGTTTPVATGYCVLGFVALACVLIAERGRLFRVQNPPAEHV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]