Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 23100913

GI number: 23100913

Start: 3596148

End: 3596582

Strand: Reverse

Name: ohrR [H]

Synonym: OB3458

Alternate gene names: 23100913

Gene position: 3596582-3596148 (Counterclockwise)

Preceding gene: 23100915

Following gene: 23100912

Centisome position: 99.06

GC content: 36.55

Gene sequence:

>435_bases
ATGGCAAATGATATATTAAAACTAGATAATCAAATATGCTTTCCGTTATATGCAGCGACTCGAGAAATGACAAAGCGATA
CCGTCCATTGTTAGAAGAGTTAAACGTTACTTATCCGCAATATATCGTCTTACTTGTTCTATGGGAAACAGATCGAATCT
CTGTAAAAGCATTAGGTGAAAGACTTTTGTTGGACTCAGGTACATTGACACCAATGCTGAAACGGATGGAAGAACATGGC
TTTATACAGCGTATGCGGTCAAAAGAAGATGAACGTATTGTTGAGGTCGTCTTAACAGAGCAAGGAAAACAAGCAGAAAA
ACAAGCGGAAAAAATTCCAATTAAGTTTATTGAACAGACGAATTTAAATGAAGCAGAGGCAGTGCAACTCAAAAAAATAT
TATTTAAAATGCTAGGTAATGAGCCACGAGCGTAA

Upstream 100 bases:

>100_bases
TTTAAGTTTTGAACAATTAAATTGTACACAATTTAATTGGGTTTCGTCAACTACTATAATTTTATTGAACTTGTTATAAT
AAGTGTAGGAGTGATTAATA

Downstream 100 bases:

>100_bases
TAAGAGGTAGAAATAATATATCAATTTGCAGTGCATGATATTCGAAAAAATCGAACGAAGCCTAGATATCCGATAAGTGG
TATCTAGGCTTTTTTATAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MANDILKLDNQICFPLYAATREMTKRYRPLLEELNVTYPQYIVLLVLWETDRISVKALGERLLLDSGTLTPMLKRMEEHG
FIQRMRSKEDERIVEVVLTEQGKQAEKQAEKIPIKFIEQTNLNEAEAVQLKKILFKMLGNEPRA

Sequences:

>Translated_144_residues
MANDILKLDNQICFPLYAATREMTKRYRPLLEELNVTYPQYIVLLVLWETDRISVKALGERLLLDSGTLTPMLKRMEEHG
FIQRMRSKEDERIVEVVLTEQGKQAEKQAEKIPIKFIEQTNLNEAEAVQLKKILFKMLGNEPRA
>Mature_143_residues
ANDILKLDNQICFPLYAATREMTKRYRPLLEELNVTYPQYIVLLVLWETDRISVKALGERLLLDSGTLTPMLKRMEEHGF
IQRMRSKEDERIVEVVLTEQGKQAEKQAEKIPIKFIEQTNLNEAEAVQLKKILFKMLGNEPRA

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16819; Mature: 16688

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDILKLDNQICFPLYAATREMTKRYRPLLEELNVTYPQYIVLLVLWETDRISVKALGE
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHH
RLLLDSGTLTPMLKRMEEHGFIQRMRSKEDERIVEVVLTEQGKQAEKQAEKIPIKFIEQT
HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCC
NLNEAEAVQLKKILFKMLGNEPRA
CCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ANDILKLDNQICFPLYAATREMTKRYRPLLEELNVTYPQYIVLLVLWETDRISVKALGE
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHH
RLLLDSGTLTPMLKRMEEHGFIQRMRSKEDERIVEVVLTEQGKQAEKQAEKIPIKFIEQT
HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCC
NLNEAEAVQLKKILFKMLGNEPRA
CCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]