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The map label for this gene is yycI [H]

Identifier: 23100904

GI number: 23100904

Start: 3585314

End: 3586258

Strand: Reverse

Name: yycI [H]

Synonym: OB3449

Alternate gene names: 23100904

Gene position: 3586258-3585314 (Counterclockwise)

Preceding gene: 23100905

Following gene: 23100903

Centisome position: 98.78

GC content: 35.66

Gene sequence:

>945_bases
ATGCAATGGTCTCATATTAAAACACTTTTTATCCTCAGTTTCCTTGTCTTAAATATTTATTTGCTTTTCCAATTCGTTCA
ACGTCAAGATCAGAATGACCTTCCATCTTTGAGCAACGATAATCAGACGTTAGATGAACAATTGGAATCAGAAAATATTC
AAATTGACGATGCTGTCCTTAATAGAGAAGTTCCTGATTTTCGCTATCTATCCGTGGCTCAACGCCTATTTGAATCAGCT
GAAGTAGAAGATTTAAATGGTATAGATGGATTACAAGTGACTACAAGCATAGATAATACGCTTCTATTTGCACAATTTGA
GGAACCTATTGAGATGCCAGAAGAAGGTACAGAAAGTGAAATGCTTCAAAGTATCATTGCACCATATGTTATGCAAGCCG
GCCAGTATACCTATGGTACATGGAATAAAGAATTAAATGTTATTGCTTACTTTCAAACAAAAGAAGGCGCACCAATATTT
CTTAATCAGCAGGCAATACTTCTCTTTTATTTAAATGATGATAATGAGATCACACATTATACGCAAACCATGCTTGGGGA
TGCGGATAAACAAGGAGATAGATCGATAGTGACTCCGAAAACGGCTATTGGCTATTTGTTAAGGGGAAGTAATGGTTACC
TCAGACAAGATCAGGAAGTCAGTGATATAGATATAGGATATTATTCTCGTATTGAACCTGAAGATGGTGGAGAAATTGTC
TTTGCACCAACGTGGAAAGTGACAATCGATGATGCGGTTGATTATTTTGTTAATGGTTTTGAAGGTATTATTTACCCAGG
CGACTATACGCAATTTTTTACAGATACCATTAATGAAAATATTTTAGTGCAAGCAAGACGATTAAATGAAGAAAATGAAA
TAAGAGAAAACATCATACAATTGATGGAAGGAAAGCTGGAGGAAATCGGGAGTGAAGTTGAATGA

Upstream 100 bases:

>100_bases
ACGTATCAATGGAACCAGAATGGTTTATGAAAATAAATAATAATTGGTCAGCTGTACCGTATTATCAGCCTGGTGCAGCT
GCTAAAGGAGGGGATTGAGG

Downstream 100 bases:

>100_bases
CCCTACGTTTTAGTGTACTAGCCTCAGGCAGTACAGGGAACGCATTTTATATAGAAACAGAGCAGCAAAAGATGCTAGTT
GACGCAGGATTAAGTGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQWSHIKTLFILSFLVLNIYLLFQFVQRQDQNDLPSLSNDNQTLDEQLESENIQIDDAVLNREVPDFRYLSVAQRLFESA
EVEDLNGIDGLQVTTSIDNTLLFAQFEEPIEMPEEGTESEMLQSIIAPYVMQAGQYTYGTWNKELNVIAYFQTKEGAPIF
LNQQAILLFYLNDDNEITHYTQTMLGDADKQGDRSIVTPKTAIGYLLRGSNGYLRQDQEVSDIDIGYYSRIEPEDGGEIV
FAPTWKVTIDDAVDYFVNGFEGIIYPGDYTQFFTDTINENILVQARRLNEENEIRENIIQLMEGKLEEIGSEVE

Sequences:

>Translated_314_residues
MQWSHIKTLFILSFLVLNIYLLFQFVQRQDQNDLPSLSNDNQTLDEQLESENIQIDDAVLNREVPDFRYLSVAQRLFESA
EVEDLNGIDGLQVTTSIDNTLLFAQFEEPIEMPEEGTESEMLQSIIAPYVMQAGQYTYGTWNKELNVIAYFQTKEGAPIF
LNQQAILLFYLNDDNEITHYTQTMLGDADKQGDRSIVTPKTAIGYLLRGSNGYLRQDQEVSDIDIGYYSRIEPEDGGEIV
FAPTWKVTIDDAVDYFVNGFEGIIYPGDYTQFFTDTINENILVQARRLNEENEIRENIIQLMEGKLEEIGSEVE
>Mature_314_residues
MQWSHIKTLFILSFLVLNIYLLFQFVQRQDQNDLPSLSNDNQTLDEQLESENIQIDDAVLNREVPDFRYLSVAQRLFESA
EVEDLNGIDGLQVTTSIDNTLLFAQFEEPIEMPEEGTESEMLQSIIAPYVMQAGQYTYGTWNKELNVIAYFQTKEGAPIF
LNQQAILLFYLNDDNEITHYTQTMLGDADKQGDRSIVTPKTAIGYLLRGSNGYLRQDQEVSDIDIGYYSRIEPEDGGEIV
FAPTWKVTIDDAVDYFVNGFEGIIYPGDYTQFFTDTINENILVQARRLNEENEIRENIIQLMEGKLEEIGSEVE

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 36060; Mature: 36060

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWSHIKTLFILSFLVLNIYLLFQFVQRQDQNDLPSLSNDNQTLDEQLESENIQIDDAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHH
NREVPDFRYLSVAQRLFESAEVEDLNGIDGLQVTTSIDNTLLFAQFEEPIEMPEEGTESE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHH
MLQSIIAPYVMQAGQYTYGTWNKELNVIAYFQTKEGAPIFLNQQAILLFYLNDDNEITHY
HHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECCCCCEEECCCEEEEEEECCCCCHHHH
TQTMLGDADKQGDRSIVTPKTAIGYLLRGSNGYLRQDQEVSDIDIGYYSRIEPEDGGEIV
HHHHHCCCCCCCCCCEECCHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
FAPTWKVTIDDAVDYFVNGFEGIIYPGDYTQFFTDTINENILVQARRLNEENEIRENIIQ
EECEEEEEHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHH
LMEGKLEEIGSEVE
HHHHHHHHCCCCCC
>Mature Secondary Structure
MQWSHIKTLFILSFLVLNIYLLFQFVQRQDQNDLPSLSNDNQTLDEQLESENIQIDDAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHH
NREVPDFRYLSVAQRLFESAEVEDLNGIDGLQVTTSIDNTLLFAQFEEPIEMPEEGTESE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHH
MLQSIIAPYVMQAGQYTYGTWNKELNVIAYFQTKEGAPIFLNQQAILLFYLNDDNEITHY
HHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECCCCCEEECCCEEEEEEECCCCCHHHH
TQTMLGDADKQGDRSIVTPKTAIGYLLRGSNGYLRQDQEVSDIDIGYYSRIEPEDGGEIV
HHHHHCCCCCCCCCCEECCHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE
FAPTWKVTIDDAVDYFVNGFEGIIYPGDYTQFFTDTINENILVQARRLNEENEIRENIIQ
EECEEEEEHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHHH
LMEGKLEEIGSEVE
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]