Click here to switch to the map view.

The map label for this gene is yufN [H]

Identifier: 23100843

GI number: 23100843

Start: 3525892

End: 3527016

Strand: Reverse

Name: yufN [H]

Synonym: OB3388

Alternate gene names: 23100843

Gene position: 3527016-3525892 (Counterclockwise)

Preceding gene: 23100845

Following gene: 23100842

Centisome position: 97.15

GC content: 39.02

Gene sequence:

>1125_bases
ATGAAAAATCATAAGTTTTTGTTGTTTGTTTTGGTTTTAACATTCGGTCTGTTCTTAGCTGCATGTGGTAGTTCGGATGA
AGGCGAAGAAAGCGATGCAGGTGCAGAAGGAACAGAAGAAGGTACAAGTGGTGAAGGTGAAGCAACTGCTTCTGATGATT
ATAGTATTGCAATGGTTACAGATATCGGTGGAGTAGATGATAAATCATTTAACCAATCCGCATGGGAAGGTATTACTGCA
TGGGGAGAAGTGAACGGTTTATCTCAAGGTAATGGTTTTGATTATGCACAGTCTTCGGACAAGGCGGATTATATGCCGAA
TTTAACGCGTTTTGTACGTGATGAATATGATTTAGTTTATGGAATTGGATTTGAATTAAAAGAAGATATTCAAAAAGCTG
CTGAGCAATATCCAGATACGAACTTTGCGCTAGTGGATGATGTTGTGGAAGCGGATAATGCAGTAGGTATTACATTCAGT
GAACACCAAGGTTCATTCTTGGTTGGTGTAGCTGCAGCAATGAAAACTACTACAGATAAAATAGGTTTTGTTGGTGGAGT
AGATTCTCCATTAATCAAAAAATTCGAATCTGGCTTTATCGCTGGAGCGAAATCAGTAAATCCTGATATCGAAGTGGATG
TTCAGTATGCAGAGTCATTTGCTGATGCTGCAAAAGGAAAGTTAATTGCAACAAACATGTATGACAGCGGCGTAGATGTG
ATTTATCATGCATCTGGTGCAACTGGTAATGGAGTATTTAACCAAGCAAAAGACATTAAACAAAATGATCCAGAGCGTGA
GATTTGGGTAATTGGTGTTGACCGTGATCAGCACGAAGAAGGTGCGATTGGCGATCATAACGTAACATTAACATCTATGG
TGAAACGTGTAGACGTAGCTGTACAAGATGTTGCGAATCGTGGAATGCTTGGCGAATTCCCTGGTGGAGAGACGTTAGAG
TATGGAATAGAAGATGATGCGATTGTTGCCGCTACTACAAACGAAGAAGCGATGACAGAAGATATCATTACCGCTATCGA
AGATTATACTAAACAAATCTTAAACGGTGAAATTGAAGTTCCACATACAGAAGAAGAATTAACTACATTTTTAGAATCAC
TATAA

Upstream 100 bases:

>100_bases
AATAGATTATTTGAGTATAAAGGTCGGAATAAAAGCAAGGGTTCAAATGCTTATTGGGTGTTTGTTCCTACATAAGAAAG
TCAAAACAGGAGGGAAAAAA

Downstream 100 bases:

>100_bases
GCAATACAAGTGTTAGCGAGCTTTATAATTATATAAGTTTAAAAATACAATGAAAAAGGTTTTTCCTGCTTTTAGCTTAC
AGTATGTGAAACGAGCGATC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVTDIGGVDDKSFNQSAWEGITA
WGEVNGLSQGNGFDYAQSSDKADYMPNLTRFVRDEYDLVYGIGFELKEDIQKAAEQYPDTNFALVDDVVEADNAVGITFS
EHQGSFLVGVAAAMKTTTDKIGFVGGVDSPLIKKFESGFIAGAKSVNPDIEVDVQYAESFADAAKGKLIATNMYDSGVDV
IYHASGATGNGVFNQAKDIKQNDPEREIWVIGVDRDQHEEGAIGDHNVTLTSMVKRVDVAVQDVANRGMLGEFPGGETLE
YGIEDDAIVAATTNEEAMTEDIITAIEDYTKQILNGEIEVPHTEEELTTFLESL

Sequences:

>Translated_374_residues
MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVTDIGGVDDKSFNQSAWEGITA
WGEVNGLSQGNGFDYAQSSDKADYMPNLTRFVRDEYDLVYGIGFELKEDIQKAAEQYPDTNFALVDDVVEADNAVGITFS
EHQGSFLVGVAAAMKTTTDKIGFVGGVDSPLIKKFESGFIAGAKSVNPDIEVDVQYAESFADAAKGKLIATNMYDSGVDV
IYHASGATGNGVFNQAKDIKQNDPEREIWVIGVDRDQHEEGAIGDHNVTLTSMVKRVDVAVQDVANRGMLGEFPGGETLE
YGIEDDAIVAATTNEEAMTEDIITAIEDYTKQILNGEIEVPHTEEELTTFLESL
>Mature_374_residues
MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVTDIGGVDDKSFNQSAWEGITA
WGEVNGLSQGNGFDYAQSSDKADYMPNLTRFVRDEYDLVYGIGFELKEDIQKAAEQYPDTNFALVDDVVEADNAVGITFS
EHQGSFLVGVAAAMKTTTDKIGFVGGVDSPLIKKFESGFIAGAKSVNPDIEVDVQYAESFADAAKGKLIATNMYDSGVDV
IYHASGATGNGVFNQAKDIKQNDPEREIWVIGVDRDQHEEGAIGDHNVTLTSMVKRVDVAVQDVANRGMLGEFPGGETLE
YGIEDDAIVAATTNEEAMTEDIITAIEDYTKQILNGEIEVPHTEEELTTFLESL

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 40224; Mature: 40224

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
DIGGVDDKSFNQSAWEGITAWGEVNGLSQGNGFDYAQSSDKADYMPNLTRFVRDEYDLVY
ECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
GIGFELKEDIQKAAEQYPDTNFALVDDVVEADNAVGITFSEHQGSFLVGVAAAMKTTTDK
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHH
IGFVGGVDSPLIKKFESGFIAGAKSVNPDIEVDVQYAESFADAAKGKLIATNMYDSGVDV
CCCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCE
IYHASGATGNGVFNQAKDIKQNDPEREIWVIGVDRDQHEEGAIGDHNVTLTSMVKRVDVA
EEECCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
VQDVANRGMLGEFPGGETLEYGIEDDAIVAATTNEEAMTEDIITAIEDYTKQILNGEIEV
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
PHTEEELTTFLESL
CCCHHHHHHHHHHC
>Mature Secondary Structure
MKNHKFLLFVLVLTFGLFLAACGSSDEGEESDAGAEGTEEGTSGEGEATASDDYSIAMVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
DIGGVDDKSFNQSAWEGITAWGEVNGLSQGNGFDYAQSSDKADYMPNLTRFVRDEYDLVY
ECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
GIGFELKEDIQKAAEQYPDTNFALVDDVVEADNAVGITFSEHQGSFLVGVAAAMKTTTDK
ECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEHHHHHHHHHHHH
IGFVGGVDSPLIKKFESGFIAGAKSVNPDIEVDVQYAESFADAAKGKLIATNMYDSGVDV
CCCCCCCCCHHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCE
IYHASGATGNGVFNQAKDIKQNDPEREIWVIGVDRDQHEEGAIGDHNVTLTSMVKRVDVA
EEECCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
VQDVANRGMLGEFPGGETLEYGIEDDAIVAATTNEEAMTEDIITAIEDYTKQILNGEIEV
HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
PHTEEELTTFLESL
CCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]