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The map label for this gene is yufP [H]

Identifier: 23100841

GI number: 23100841

Start: 3522956

End: 3524005

Strand: Reverse

Name: yufP [H]

Synonym: OB3386

Alternate gene names: 23100841

Gene position: 3524005-3522956 (Counterclockwise)

Preceding gene: 23100842

Following gene: 23100840

Centisome position: 97.07

GC content: 41.05

Gene sequence:

>1050_bases
ATGACATCAAACAATAAATTATTCGGATTATTAGTACCGATTATTTCGGTTATTATCGGTTTACTGGCAGGAGCTGTCAT
CATGCTGTTATCCGGCCACGATCCGATTCAAGGATATACCGCGTTATGGAATGGTGCGTTTGGCGATGCCTATACGATTG
GCGAAACAATTCGCAGAACAACACCATTAATCTTAACAGGGCTTGCGGTTGCTTTTGCATTTAAAACTGGACTATTTAAT
ATTGGTGCCGAGGGACAAGTAATTGTTGGCTGGCTCGCTGCTGTCTGGGTTGGACTAGCCATCGATGCACCGATGATTGT
CCATCTGCCGCTTGCAATTATTGCTGGTGCATTAGCTGGTAGTTTATGGGGTTTCTTACCTGGTTTGTTAAAAGCAAAAC
TAGGAGTACATGAAGTAATCATCACGATTATGATGAACTATATTGCGTTGTTTATCACAAATGAAATTATACGAAGTGTC
TTAACCGATCAAAATACAACCACAGAATCGATTGCAGGAACAGCTTCTTTAGCATCGGAATGGTTACAGGGCATTACTTT
TTACTCTCGAGTTCACTATGGTATTCTGATTGCGCTGCTCGCAGCATTTATCATGTGGTTTATTATCGAGCGGACAAGTT
ATGGGTATGAATTGAAATCGGTTGGGTACAATCTTCATGCTTCGAATTATGCTGGGATGAATGTAAGTAAAAATATCATT
CTATCTATGGTGATTGGTGGAGCATTTGCAGGACTAGCAGGAGCTATGGAAGGACTGGGAACATACGGTACCATATCCGT
GATGGCTGGATTTACCAATCTCGGATTTGACGGGATAGCAGTAGCATTACTTGGATCGAACAATGCGATTGGAGTTGTAT
TAGCTGCCATTCTTTTCGGAGCATTAAAAGAAGGTGCCGGAGAAATGCCGACAGCTGCAGGAGTACCGACCGAATTAGTA
GATATTATTATTGCATTAATTATTTTCTTTGTAGCATCAAGTTATATTATTCGCTGGGCAGTACTTCGCTTTAAAAAGGA
GGAAAAATAG

Upstream 100 bases:

>100_bases
GCAAGATTGTCGCCGATGTGAAACCAGAAGACACAAACGAACAAGAGCTTGGTCTGTTAATGGCAGGAAGCAAAGTGGAC
AAGGCAGGTGAGACAAGCGA

Downstream 100 bases:

>100_bases
ATGCTAGATATTTTACAATCCATTGTTCCAACGGTTCTATTTTATTCAGCACCTCTTATTTTAACAGCGCTAGGCGGAGT
ATTCAGTGAGCGATCCGGTG

Product: sugar ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTSNNKLFGLLVPIISVIIGLLAGAVIMLLSGHDPIQGYTALWNGAFGDAYTIGETIRRTTPLILTGLAVAFAFKTGLFN
IGAEGQVIVGWLAAVWVGLAIDAPMIVHLPLAIIAGALAGSLWGFLPGLLKAKLGVHEVIITIMMNYIALFITNEIIRSV
LTDQNTTTESIAGTASLASEWLQGITFYSRVHYGILIALLAAFIMWFIIERTSYGYELKSVGYNLHASNYAGMNVSKNII
LSMVIGGAFAGLAGAMEGLGTYGTISVMAGFTNLGFDGIAVALLGSNNAIGVVLAAILFGALKEGAGEMPTAAGVPTELV
DIIIALIIFFVASSYIIRWAVLRFKKEEK

Sequences:

>Translated_349_residues
MTSNNKLFGLLVPIISVIIGLLAGAVIMLLSGHDPIQGYTALWNGAFGDAYTIGETIRRTTPLILTGLAVAFAFKTGLFN
IGAEGQVIVGWLAAVWVGLAIDAPMIVHLPLAIIAGALAGSLWGFLPGLLKAKLGVHEVIITIMMNYIALFITNEIIRSV
LTDQNTTTESIAGTASLASEWLQGITFYSRVHYGILIALLAAFIMWFIIERTSYGYELKSVGYNLHASNYAGMNVSKNII
LSMVIGGAFAGLAGAMEGLGTYGTISVMAGFTNLGFDGIAVALLGSNNAIGVVLAAILFGALKEGAGEMPTAAGVPTELV
DIIIALIIFFVASSYIIRWAVLRFKKEEK
>Mature_348_residues
TSNNKLFGLLVPIISVIIGLLAGAVIMLLSGHDPIQGYTALWNGAFGDAYTIGETIRRTTPLILTGLAVAFAFKTGLFNI
GAEGQVIVGWLAAVWVGLAIDAPMIVHLPLAIIAGALAGSLWGFLPGLLKAKLGVHEVIITIMMNYIALFITNEIIRSVL
TDQNTTTESIAGTASLASEWLQGITFYSRVHYGILIALLAAFIMWFIIERTSYGYELKSVGYNLHASNYAGMNVSKNIIL
SMVIGGAFAGLAGAMEGLGTYGTISVMAGFTNLGFDGIAVALLGSNNAIGVVLAAILFGALKEGAGEMPTAAGVPTELVD
IIIALIIFFVASSYIIRWAVLRFKKEEK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36877; Mature: 36746

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNNKLFGLLVPIISVIIGLLAGAVIMLLSGHDPIQGYTALWNGAFGDAYTIGETIRRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
TPLILTGLAVAFAFKTGLFNIGAEGQVIVGWLAAVWVGLAIDAPMIVHLPLAIIAGALAG
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SLWGFLPGLLKAKLGVHEVIITIMMNYIALFITNEIIRSVLTDQNTTTESIAGTASLASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
WLQGITFYSRVHYGILIALLAAFIMWFIIERTSYGYELKSVGYNLHASNYAGMNVSKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCCCCCHHHHH
LSMVIGGAFAGLAGAMEGLGTYGTISVMAGFTNLGFDGIAVALLGSNNAIGVVLAAILFG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
ALKEGAGEMPTAAGVPTELVDIIIALIIFFVASSYIIRWAVLRFKKEEK
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSNNKLFGLLVPIISVIIGLLAGAVIMLLSGHDPIQGYTALWNGAFGDAYTIGETIRRT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
TPLILTGLAVAFAFKTGLFNIGAEGQVIVGWLAAVWVGLAIDAPMIVHLPLAIIAGALAG
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SLWGFLPGLLKAKLGVHEVIITIMMNYIALFITNEIIRSVLTDQNTTTESIAGTASLASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
WLQGITFYSRVHYGILIALLAAFIMWFIIERTSYGYELKSVGYNLHASNYAGMNVSKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCCCCCHHHHH
LSMVIGGAFAGLAGAMEGLGTYGTISVMAGFTNLGFDGIAVALLGSNNAIGVVLAAILFG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
ALKEGAGEMPTAAGVPTELVDIIIALIIFFVASSYIIRWAVLRFKKEEK
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]