Click here to switch to the map view.

The map label for this gene is yiaM [C]

Identifier: 23100711

GI number: 23100711

Start: 3392741

End: 3393244

Strand: Reverse

Name: yiaM [C]

Synonym: OB3256

Alternate gene names: 23100711

Gene position: 3393244-3392741 (Counterclockwise)

Preceding gene: 23100712

Following gene: 23100710

Centisome position: 93.46

GC content: 34.72

Gene sequence:

>504_bases
ATGAAAACATATATTAATATCATGGATAGCATTAATAATTGGGTGAAATACTTGGTATCTTTCTTCCTTGTTGGACTTGC
TGTTTTGGTTGTATTGCAAGTAACAACACGATTTGTCATTAACGTGCCATTAAGCTGGACAGAAGAATTAGCAAAATACT
TGATGATTTACATTGTGTTTTTAGGTTCGGGGTTAGCGATGAGACATAATCAGCACATCGCGATTGATTTTCTATTAGAA
ATTATAAAAACAGAAAACAAAGCACGCTTGCAAAAAATTGTATTATACATTTGTGGAATTTTTAGTTTGATGTTAGTTAT
TTATGGTGCACAGTTGACCTATATCGTAATTGGTCAATCGACGCCAACTTTACAGTATTCGATGGCGTGGGCATATGCGG
CAATACCACTTGGTTCGCTTCTTATGTTGTGTAATATTATTGCATTGTTAATAAGTCCACCTGAAGATGATGATTCGAAG
GAAACGGTAGGTGACTTACTATGA

Upstream 100 bases:

>100_bases
AACCATTTAGAGAAGCTGTACAAGAAGTGAATGAAGCATTAGCTGATAAATATGGCAGAGAACTATACGATACCATACAG
GAAATGAGGGAGTAGAGCCA

Downstream 100 bases:

>100_bases
TACTTGTATTAGTTCTATCGTTAATTGTTCTATTTATTATCGGTGTACCTGTGGCAATTTCATTAGGGTTATCTTCTAGT
CTGGCGATATTAGTAGCTGG

Product: C4-dicarboxylate transport system permease small protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; Trap-Family Transport System Permease Protein; TRAP Dicarboxylate Transporter Subunit DctM; TRAP-Family Transport System Permease Protein; TRAP Transporter DctQ-Like Membrane Protein; TRAP-Type Transport System Permease Small Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKTYINIMDSINNWVKYLVSFFLVGLAVLVVLQVTTRFVINVPLSWTEELAKYLMIYIVFLGSGLAMRHNQHIAIDFLLE
IIKTENKARLQKIVLYICGIFSLMLVIYGAQLTYIVIGQSTPTLQYSMAWAYAAIPLGSLLMLCNIIALLISPPEDDDSK
ETVGDLL

Sequences:

>Translated_167_residues
MKTYINIMDSINNWVKYLVSFFLVGLAVLVVLQVTTRFVINVPLSWTEELAKYLMIYIVFLGSGLAMRHNQHIAIDFLLE
IIKTENKARLQKIVLYICGIFSLMLVIYGAQLTYIVIGQSTPTLQYSMAWAYAAIPLGSLLMLCNIIALLISPPEDDDSK
ETVGDLL
>Mature_167_residues
MKTYINIMDSINNWVKYLVSFFLVGLAVLVVLQVTTRFVINVPLSWTEELAKYLMIYIVFLGSGLAMRHNQHIAIDFLLE
IIKTENKARLQKIVLYICGIFSLMLVIYGAQLTYIVIGQSTPTLQYSMAWAYAAIPLGSLLMLCNIIALLISPPEDDDSK
ETVGDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18824; Mature: 18824

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYINIMDSINNWVKYLVSFFLVGLAVLVVLQVTTRFVINVPLSWTEELAKYLMIYIVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGSGLAMRHNQHIAIDFLLEIIKTENKARLQKIVLYICGIFSLMLVIYGAQLTYIVIGQS
HCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECC
TPTLQYSMAWAYAAIPLGSLLMLCNIIALLISPPEDDDSKETVGDLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKTYINIMDSINNWVKYLVSFFLVGLAVLVVLQVTTRFVINVPLSWTEELAKYLMIYIVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGSGLAMRHNQHIAIDFLLEIIKTENKARLQKIVLYICGIFSLMLVIYGAQLTYIVIGQS
HCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECC
TPTLQYSMAWAYAAIPLGSLLMLCNIIALLISPPEDDDSKETVGDLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA