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The map label for this gene is yrkH [H]

Identifier: 23100105

GI number: 23100105

Start: 2717869

End: 2718924

Strand: Reverse

Name: yrkH [H]

Synonym: OB2650

Alternate gene names: 23100105

Gene position: 2718924-2717869 (Counterclockwise)

Preceding gene: 23100106

Following gene: 28563942

Centisome position: 74.89

GC content: 36.46

Gene sequence:

>1056_bases
TTGGATGTTCGTAATCAATCAGACTTTGAGGAATGGAAAGTAGAAGGTGAAAAACTTACGCAAAAGAACATACCTTATTT
TGAATTATTAGAAGGTGTCGATGGTTTAGTAAGCGAACTACCTTCTGATAAAGATATTCTCGTTGTTTGTGCAAAAGAAG
GTTCATCAGTCATGATATCGGAAATGCTCTCTGAAAAGGGTATAGATGTTTTTTATCTTGAAGGTGGAATGAAAGCATGG
AGTGAACATGTAGAGCCAATCAAATTAGGTGATTTAAATGGTAAGGGTGAACTATATCAATTTGTGCGAATCGGAAAAGG
ATGTCTATCTTATATGGTTCTCTCAAATGGAGAAGCGGCAATTATTGATTCGACAAGAATGATAGATAAATATACAACAT
TTGCAAAAGAGAAAGAAGTGAAAATTATACACACGATTGATACGCATCTACATGCAGACCATATTTCTGGAGGTCGCAAA
CTGGCAGAACAAACAGGAGGGTATTATTGGCTGCCGCCACGGGATGCAGAAGAGGTGACCTTTCACTATGAAAGACTACA
AGATGGCAGTCAACTAACAGTTGGATCTTCAACTATTGATATAAAAGCAATTCATACACCAGGACATACGATTGGTTCAA
CATCTTTGATTATTGATGGTATGTATCTATTAACAGGAGATATTTTATTTATTGATTCCATCGGACGACCAGACTTAGCC
GGGAAAGCAAAAAGCTGGGGAGATGATTTAAGAGATAGCCTGTATAACAAATATAAAGATCTGTCTGGAGAATTAATCGT
ATTGCCTGCACATTTTATGATTATGAAAGAATTGAATGAAGACGGAACTGTAGCAAAAAAATTATCCAAGTTATATGAAG
AGAATCACGGATTGAATATGGACGAAGAAGCATTTACAAAATCAGTTACCACAAATCTTCCTCCACAACCAAATTCTTAT
CAAGAAATTCGTGAAACCAATTTGGGTAAAATTAGCCCAGATGCAGAACAACAGCGTGAAATGGAAATTGGTCCAAACCG
ATGTGCTATTCGCTAA

Upstream 100 bases:

>100_bases
TTTTATTATATTAAATACGTATGGGGGTATGAAAATGATGAAAAAAATGAGTGCGCATGAATTAACACGACGCATTTTAC
AGAAAGATGAATTATTTATT

Downstream 100 bases:

>100_bases
TTCAAACTTTAACGTATTAGGAGGATTAAAAATGAATGTGAAAAAAGTATTAGACGCAAAAGGATTGGCATGCCCAATGC
CAATCGTAAGAACAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MDVRNQSDFEEWKVEGEKLTQKNIPYFELLEGVDGLVSELPSDKDILVVCAKEGSSVMISEMLSEKGIDVFYLEGGMKAW
SEHVEPIKLGDLNGKGELYQFVRIGKGCLSYMVLSNGEAAIIDSTRMIDKYTTFAKEKEVKIIHTIDTHLHADHISGGRK
LAEQTGGYYWLPPRDAEEVTFHYERLQDGSQLTVGSSTIDIKAIHTPGHTIGSTSLIIDGMYLLTGDILFIDSIGRPDLA
GKAKSWGDDLRDSLYNKYKDLSGELIVLPAHFMIMKELNEDGTVAKKLSKLYEENHGLNMDEEAFTKSVTTNLPPQPNSY
QEIRETNLGKISPDAEQQREMEIGPNRCAIR

Sequences:

>Translated_351_residues
MDVRNQSDFEEWKVEGEKLTQKNIPYFELLEGVDGLVSELPSDKDILVVCAKEGSSVMISEMLSEKGIDVFYLEGGMKAW
SEHVEPIKLGDLNGKGELYQFVRIGKGCLSYMVLSNGEAAIIDSTRMIDKYTTFAKEKEVKIIHTIDTHLHADHISGGRK
LAEQTGGYYWLPPRDAEEVTFHYERLQDGSQLTVGSSTIDIKAIHTPGHTIGSTSLIIDGMYLLTGDILFIDSIGRPDLA
GKAKSWGDDLRDSLYNKYKDLSGELIVLPAHFMIMKELNEDGTVAKKLSKLYEENHGLNMDEEAFTKSVTTNLPPQPNSY
QEIRETNLGKISPDAEQQREMEIGPNRCAIR
>Mature_351_residues
MDVRNQSDFEEWKVEGEKLTQKNIPYFELLEGVDGLVSELPSDKDILVVCAKEGSSVMISEMLSEKGIDVFYLEGGMKAW
SEHVEPIKLGDLNGKGELYQFVRIGKGCLSYMVLSNGEAAIIDSTRMIDKYTTFAKEKEVKIIHTIDTHLHADHISGGRK
LAEQTGGYYWLPPRDAEEVTFHYERLQDGSQLTVGSSTIDIKAIHTPGHTIGSTSLIIDGMYLLTGDILFIDSIGRPDLA
GKAKSWGDDLRDSLYNKYKDLSGELIVLPAHFMIMKELNEDGTVAKKLSKLYEENHGLNMDEEAFTKSVTTNLPPQPNSY
QEIRETNLGKISPDAEQQREMEIGPNRCAIR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Drosophila melanogaster, GI221330176, Length=210, Percent_Identity=29.0476190476191, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR001763 [H]

Pfam domain/function: PF00753 Lactamase_B; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 39296; Mature: 39296

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRNQSDFEEWKVEGEKLTQKNIPYFELLEGVDGLVSELPSDKDILVVCAKEGSSVMIS
CCCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
EMLSEKGIDVFYLEGGMKAWSEHVEPIKLGDLNGKGELYQFVRIGKGCLSYMVLSNGEAA
HHHHHCCCEEEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
IIDSTRMIDKYTTFAKEKEVKIIHTIDTHLHADHISGGRKLAEQTGGYYWLPPRDAEEVT
EEECHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCHHHHHHHCCCEEECCCCCHHHHH
FHYERLQDGSQLTVGSSTIDIKAIHTPGHTIGSTSLIIDGMYLLTGDILFIDSIGRPDLA
HHHHHHCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHCCHHHHHCCEEEEECCCCCCCC
GKAKSWGDDLRDSLYNKYKDLSGELIVLPAHFMIMKELNEDGTVAKKLSKLYEENHGLNM
CCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
DEEAFTKSVTTNLPPQPNSYQEIRETNLGKISPDAEQQREMEIGPNRCAIR
CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDVRNQSDFEEWKVEGEKLTQKNIPYFELLEGVDGLVSELPSDKDILVVCAKEGSSVMIS
CCCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
EMLSEKGIDVFYLEGGMKAWSEHVEPIKLGDLNGKGELYQFVRIGKGCLSYMVLSNGEAA
HHHHHCCCEEEEECCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
IIDSTRMIDKYTTFAKEKEVKIIHTIDTHLHADHISGGRKLAEQTGGYYWLPPRDAEEVT
EEECHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCHHHHHHHCCCEEECCCCCHHHHH
FHYERLQDGSQLTVGSSTIDIKAIHTPGHTIGSTSLIIDGMYLLTGDILFIDSIGRPDLA
HHHHHHCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHCCHHHHHCCEEEEECCCCCCCC
GKAKSWGDDLRDSLYNKYKDLSGELIVLPAHFMIMKELNEDGTVAKKLSKLYEENHGLNM
CCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
DEEAFTKSVTTNLPPQPNSYQEIRETNLGKISPDAEQQREMEIGPNRCAIR
CHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]