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The map label for this gene is ycsE [H]

Identifier: 23099991

GI number: 23099991

Start: 2591490

End: 2592230

Strand: Reverse

Name: ycsE [H]

Synonym: OB2536

Alternate gene names: 23099991

Gene position: 2592230-2591490 (Counterclockwise)

Preceding gene: 23099992

Following gene: 23099990

Centisome position: 71.4

GC content: 34.41

Gene sequence:

>741_bases
ATGTCGGATAAACAACAAGTGAAATTAATTGCATTAGATATGGATGGAACATTATTAACCCCGGAACATGAAGTTTCTGA
GCGAAATAAAAAGGCAATTCAGACTGCTTTAGAGCAAGGAATTGATGTAATCTTAAGCACAGGAAGAAGCTGGGATACTT
GCTTCCCATTTGCAGAAGAATTAAGTTTGACTTCTTACCTTATTACTGCTAATGGGGGACAGATTTGGACCGTTGAAAAA
GAACTATTACAACAGCATTTACTTAAGACAGAAACGGTGGAAAAAATGTATTTGCTTGCTAAAGAAAAAAATATGCATTG
TTGGATGATTTCCACGGAAAAGGTTTTTAGAGGGCATGCTCCAGATAACTTGTATGACCACCAATGGTTAAAATTCGGTT
GTGCCTCTGAAGATAAAAATAAATTGGATCAAATGATAAAGGAATTATCTTATAATGATGAATTGGAATTAACTAACTCA
TTACCTACAAATATAGAGATAAATCCAAAAGGTGTTAGTAAAGCACAAGCATTACAATTCTTATGTGAGAAGATAGGGAT
TACAATGGATAATGTGATGGCAGTAGGCGATAGTTTAAATGATATTAAAATGATACAAGAAGCAGGAGTCGGAGTAGCTA
TGGGGAACGCCCAAGTAGCTATAAAAAAAGTTGCTAACTATACAACTGATACGAATGAAGAAGATGGTGTAGGAATAGCA
ATTGAAAAATATGCATTATAG

Upstream 100 bases:

>100_bases
ATTCGTAAGCATAAACTAGATTAGAGTGTTGTATTGGAATTCTATATATCAATTACCGTATACTATAGAATATAGTTGAA
GCATAAAGGAGTATATATAA

Downstream 100 bases:

>100_bases
CAAAAGATGAATTACGATAAATGAAAGGGAATTTTCGCCTCATTGTTAGAGTGGAATTCCTTTTTTTATATAATTTAATA
AGTAAGTCAATTTCAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSDKQQVKLIALDMDGTLLTPEHEVSERNKKAIQTALEQGIDVILSTGRSWDTCFPFAEELSLTSYLITANGGQIWTVEK
ELLQQHLLKTETVEKMYLLAKEKNMHCWMISTEKVFRGHAPDNLYDHQWLKFGCASEDKNKLDQMIKELSYNDELELTNS
LPTNIEINPKGVSKAQALQFLCEKIGITMDNVMAVGDSLNDIKMIQEAGVGVAMGNAQVAIKKVANYTTDTNEEDGVGIA
IEKYAL

Sequences:

>Translated_246_residues
MSDKQQVKLIALDMDGTLLTPEHEVSERNKKAIQTALEQGIDVILSTGRSWDTCFPFAEELSLTSYLITANGGQIWTVEK
ELLQQHLLKTETVEKMYLLAKEKNMHCWMISTEKVFRGHAPDNLYDHQWLKFGCASEDKNKLDQMIKELSYNDELELTNS
LPTNIEINPKGVSKAQALQFLCEKIGITMDNVMAVGDSLNDIKMIQEAGVGVAMGNAQVAIKKVANYTTDTNEEDGVGIA
IEKYAL
>Mature_245_residues
SDKQQVKLIALDMDGTLLTPEHEVSERNKKAIQTALEQGIDVILSTGRSWDTCFPFAEELSLTSYLITANGGQIWTVEKE
LLQQHLLKTETVEKMYLLAKEKNMHCWMISTEKVFRGHAPDNLYDHQWLKFGCASEDKNKLDQMIKELSYNDELELTNSL
PTNIEINPKGVSKAQALQFLCEKIGITMDNVMAVGDSLNDIKMIQEAGVGVAMGNAQVAIKKVANYTTDTNEEDGVGIAI
EKYAL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=33.2089552238806, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1786982, Length=261, Percent_Identity=27.9693486590038, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081790, Length=264, Percent_Identity=28.030303030303, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27517; Mature: 27386

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKQQVKLIALDMDGTLLTPEHEVSERNKKAIQTALEQGIDVILSTGRSWDTCFPFAEE
CCCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCHHH
LSLTSYLITANGGQIWTVEKELLQQHLLKTETVEKMYLLAKEKNMHCWMISTEKVFRGHA
HCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCC
PDNLYDHQWLKFGCASEDKNKLDQMIKELSYNDELELTNSLPTNIEINPKGVSKAQALQF
CCCCCCCHHHEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCHHHHHHH
LCEKIGITMDNVMAVGDSLNDIKMIQEAGVGVAMGNAQVAIKKVANYTTDTNEEDGVGIA
HHHHHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCEEE
IEKYAL
EEEECC
>Mature Secondary Structure 
SDKQQVKLIALDMDGTLLTPEHEVSERNKKAIQTALEQGIDVILSTGRSWDTCFPFAEE
CCCCEEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCCCCHHH
LSLTSYLITANGGQIWTVEKELLQQHLLKTETVEKMYLLAKEKNMHCWMISTEKVFRGHA
HCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHCCCC
PDNLYDHQWLKFGCASEDKNKLDQMIKELSYNDELELTNSLPTNIEINPKGVSKAQALQF
CCCCCCCHHHEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCHHHHHHH
LCEKIGITMDNVMAVGDSLNDIKMIQEAGVGVAMGNAQVAIKKVANYTTDTNEEDGVGIA
HHHHHCCCHHHHHHHCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCEEE
IEKYAL
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]