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The map label for this gene is fliD [H]

Identifier: 23099956

GI number: 23099956

Start: 2559639

End: 2561120

Strand: Reverse

Name: fliD [H]

Synonym: OB2501

Alternate gene names: 23099956

Gene position: 2561120-2559639 (Counterclockwise)

Preceding gene: 23099957

Following gene: 23099955

Centisome position: 70.54

GC content: 35.22

Gene sequence:

>1482_bases
ATGCGAATAGGCGGATTGGCCAGTGGAATAGACACAGAATCAATTATTAAAGATTTGATGCAGGCGGAAAGAATACCTTT
AAACAAATTAGAACAGGATAAAACAAAACTTGAATGGCAACGTGATGCATTTCGGGATGTAAATAAATTGTTATCTGAAT
TAGACAATATGATGTTAGATATGAAACTTAGCTCCACGTATAACTCGAAATTAATTTCATCTACTCAAAGTGATGCGGTA
AAAGCTACAGCAAATGCCGGAGCATCCAATGGGACTTACTCGATAAATGTGAGCCAGTTAGCTACATCTGCGATAAATGT
AAGTGAAGGTGAAGTTGAGTTTGACCCAAATAAAACTTTGCATGAACAAGGAATTACCGAAGATGTAGAATTTACTACTT
TTGATAAAGACGGAAATGAGCAGACTCATACTTATAAAATTGAAGAAGGCGATACATTAAAAGATTTAATGAAAAAAGTA
AATGATGATAAAGAAAGCCCTATTCGAATGTCATATGATGAAAATGCGAATAAACTCATTATGGAGACTACACGAACCGG
TCAGTACAATGAATCAGGTAGTGAGATTGAATTTAATGAGAGTAGTCAATTCGCAAGTAAATTTAATTTATTAATGGAAA
ACGAAACTGGCGGAGATAACGCAAAATTCACCTACAATAATGCGTACGAAACTGAATCCCGTGATAATCAATATTCTTTA
AATGGAGTAACATTTCAGTTTTATGATACAACTGACGGAAATGCAACCTTAACTGTCAATAATGATGTAGATGGATCTGT
TGAGAATATCATGAAATTCGTTGATAAATACAATGAAATTGTTGAAACGATAAATGGTTCTCAACAAGAAGAAAAATACC
GTGATTTCCCTCCATTAACGGAAGAGCAAAAAAAAGAAATGACGGAAAGAGAAATTGAACTTTGGGAAGAAAAAGCTAAA
AGTGGACTTCTTAAAGGAGAATCTTCATTGTCTAACGGACTATTTAATATGCGTGAGAGTTGGTATAGCACTGTAAATGG
GGATGGAGCATTTAAAAGTTTAACAGAAATCGGTATTACTACTTCTACTAATTATATGGACGGTGGTAAGTTAGTTGTTG
ATGAATCCGCTCTAAGAGAAGCAATTACGGATGATCCTGAAAGTGTGCAAAAATTATTTTCAAATAGTAGCGAAGGCGAT
GACAGAGGCTTAATCAATCGCTTAGAAAATGCCGTGGAATCAACAATGGGACAAATTAGTCAGCGTGCTGGGAACGTCAC
AGATACTTCACTGGATAGCTATACTTTAGGCAAACGTATGAAAGATATTGATAGTAGAATTACAAATTTTGAACGTCGTT
TAGAGCAAACAGAGGCAAGATATTGGAGACAATTCTCCGAAATGGAGAGAGCAATTTCTATGATGAATCAGCAATCGTCC
ATGTTAATGTCTAACTTTGGTTCTGGAATGGCACAAGGATAG

Upstream 100 bases:

>100_bases
TATTAAAGAAATACCTCCAAAGAAAATGCTAGATATGTACGCTGAGCTAGCAGAATTTATGGGATTTTTAATTGATGAGA
AAATTTAAGGGTGTGAGGAT

Downstream 100 bases:

>100_bases
TTAAGGAGGAAAGACGAATGGTAGCTAACAATGCATATCAAGTCTATCAAAATAATTCAGTGAACACAGCATCAAACGGA
GAATTAACCTTAATGCTTTA

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLDMKLSSTYNSKLISSTQSDAV
KATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTLHEQGITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKV
NDDKESPIRMSYDENANKLIMETTRTGQYNESGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNNAYETESRDNQYSL
NGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRDFPPLTEEQKKEMTEREIELWEEKAK
SGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLTEIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGD
DRGLINRLENAVESTMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAISMMNQQSS
MLMSNFGSGMAQG

Sequences:

>Translated_493_residues
MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLDMKLSSTYNSKLISSTQSDAV
KATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTLHEQGITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKV
NDDKESPIRMSYDENANKLIMETTRTGQYNESGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNNAYETESRDNQYSL
NGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRDFPPLTEEQKKEMTEREIELWEEKAK
SGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLTEIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGD
DRGLINRLENAVESTMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAISMMNQQSS
MLMSNFGSGMAQG
>Mature_493_residues
MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLDMKLSSTYNSKLISSTQSDAV
KATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTLHEQGITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKV
NDDKESPIRMSYDENANKLIMETTRTGQYNESGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNNAYETESRDNQYSL
NGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRDFPPLTEEQKKEMTEREIELWEEKAK
SGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLTEIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGD
DRGLINRLENAVESTMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAISMMNQQSS
MLMSNFGSGMAQG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=279, Percent_Identity=27.2401433691756, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 55538; Mature: 55538

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLD
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKLSSTYNSKLISSTQSDAVKATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTL
HHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCEEECCCCHH
HEQGITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKVNDDKESPIRMSYDENANKLI
HHCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEE
METTRTGQYNESGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNNAYETESRDNQYSL
EEECCCCCCCCCCCEEEECCHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCEEE
NGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRDFPPLT
CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
EEQKKEMTEREIELWEEKAKSGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLTEIGIT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
TSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGDDRGLINRLENAVESTMGQIS
CCCCCCCCCEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAISMMNQQSS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMSNFGSGMAQG
HHHHHHCCCCCCC
>Mature Secondary Structure
MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLD
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKLSSTYNSKLISSTQSDAVKATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTL
HHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCEEECCCCHH
HEQGITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKVNDDKESPIRMSYDENANKLI
HHCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEE
METTRTGQYNESGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNNAYETESRDNQYSL
EEECCCCCCCCCCCEEEECCHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCEEE
NGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRDFPPLT
CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
EEQKKEMTEREIELWEEKAKSGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLTEIGIT
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
TSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGDDRGLINRLENAVESTMGQIS
CCCCCCCCCEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAISMMNQQSS
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLMSNFGSGMAQG
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]