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The map label for this gene is yvyD [H]

Identifier: 23099953

GI number: 23099953

Start: 2557981

End: 2558538

Strand: Reverse

Name: yvyD [H]

Synonym: OB2498

Alternate gene names: 23099953

Gene position: 2558538-2557981 (Counterclockwise)

Preceding gene: 23099954

Following gene: 23099952

Centisome position: 70.47

GC content: 34.05

Gene sequence:

>558_bases
ATGAAGTTTAATATTCGAGGCGAAAATATTGAAGTTACTGGAGCAATCAAAGAATATGTTGAGAAAAAAATTAGTAAACT
AGAAAGATATTTTGATTCAGCTCCAAATACGGATGTACATGTCAATTTAAGTGTCTACAATGATGAACAACGAATCGAAG
TTACGATTCCTATGACCAATTTGCTTCTCCGAGGAGAGGTACAGCATATTGATCTCTATGCCGCAGTGGATTTAGTCGTT
GATAAGTTAGAAAGACAAATTCGTAAGCATAAAACAAAAATAAATCGTAAGTTCAGACAAAATGGTTCTCCTAAACATGC
TTTTGCAGAAATGGAAAAAGAAGCTAGACTAGCTGAAGATGAAGAAGATGAAAATCAATTAGAAATTGTTCGTACAAAAA
GATTTAATTTAAAACCGATGGACTCCGAAGAAGCGATCTTACAAATGGACATGTTAGGACATGAGTTCTTCGTATTTACC
AATGACGATTCTGGTGAAACGAATGTTGTTTATAGACGTAGAGATGGGAAATACGGTTTGATAGAACCACATGTTTAA

Upstream 100 bases:

>100_bases
CAAAAATTTGTAACGGTGTAATAAAAAACAAGTTTAGAGAAGAGATGTTTGTGATATAGTGATATAATAAATATATAAAG
TATAAGAGGAGGACACTTGT

Downstream 100 bases:

>100_bases
AAAAACGTAATTATATAGAGATATTAGCTTGGGACATAAATTTTGTCCCAAGCTTTTTTAAATATTTACGAATGCATTGT
CAAAATATGTCGAACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKFNIRGENIEVTGAIKEYVEKKISKLERYFDSAPNTDVHVNLSVYNDEQRIEVTIPMTNLLLRGEVQHIDLYAAVDLVV
DKLERQIRKHKTKINRKFRQNGSPKHAFAEMEKEARLAEDEEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFT
NDDSGETNVVYRRRDGKYGLIEPHV

Sequences:

>Translated_185_residues
MKFNIRGENIEVTGAIKEYVEKKISKLERYFDSAPNTDVHVNLSVYNDEQRIEVTIPMTNLLLRGEVQHIDLYAAVDLVV
DKLERQIRKHKTKINRKFRQNGSPKHAFAEMEKEARLAEDEEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFT
NDDSGETNVVYRRRDGKYGLIEPHV
>Mature_185_residues
MKFNIRGENIEVTGAIKEYVEKKISKLERYFDSAPNTDVHVNLSVYNDEQRIEVTIPMTNLLLRGEVQHIDLYAAVDLVV
DKLERQIRKHKTKINRKFRQNGSPKHAFAEMEKEARLAEDEEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFT
NDDSGETNVVYRRRDGKYGLIEPHV

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=96, Percent_Identity=37.5, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21711; Mature: 21711

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNIRGENIEVTGAIKEYVEKKISKLERYFDSAPNTDVHVNLSVYNDEQRIEVTIPMTN
CEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECHHH
LLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHAFAEMEKEARLAED
EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
EEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVYRRRDGKYGL
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCC
IEPHV
CCCCC
>Mature Secondary Structure
MKFNIRGENIEVTGAIKEYVEKKISKLERYFDSAPNTDVHVNLSVYNDEQRIEVTIPMTN
CEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEECHHH
LLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHAFAEMEKEARLAED
EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
EEDENQLEIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVYRRRDGKYGL
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCC
IEPHV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377; 1901557 [H]